RNA–Protein interactions for RNA: ENST00000415409.5

HDAC8-211, Transcript of histone deacetylase 8, humanhuman

TSL 5

Gene HDAC8, Length 913 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-211ENST00000415409 RAB33AQ14088 237 aa6.83□□□□□ -1.32
HDAC8-211ENST00000415409 TRIP4Q15650 581 aaPredicted RBP6.83□□□□□ -1.32
HDAC8-211ENST00000415409 KRT71Q3SY84 523 aa6.83□□□□□ -1.32
HDAC8-211ENST00000415409 C10orf120Q5SQS8 335 aa6.83□□□□□ -1.32
HDAC8-211ENST00000415409 RNASEH2BQ5TBB1 312 aaKnown RBP6.83□□□□□ -1.32
HDAC8-211ENST00000415409 FAM72AQ5TYM5 149 aa6.83□□□□□ -1.32
HDAC8-211ENST00000415409 HEATR6Q6AI08 1181 aaKnown RBP6.83□□□□□ -1.32
HDAC8-211ENST00000415409 FAM72DQ6L9T8 149 aa6.83□□□□□ -1.32
HDAC8-211ENST00000415409 RWDD4Q6NW29 188 aaKnown RBP6.83□□□□□ -1.32
HDAC8-211ENST00000415409 LRRC31Q6UY01 552 aa6.83□□□□□ -1.32
HDAC8-211ENST00000415409 ARHGEF18Q6ZSZ5 1173 aa6.83□□□□□ -1.32
HDAC8-211ENST00000415409 TMCO2Q7Z6W1 182 aaPredicted RBP6.83□□□□□ -1.32
HDAC8-211ENST00000415409 FAM72BQ86X60 149 aa6.83□□□□□ -1.32
HDAC8-211ENST00000415409 RELL1Q8IUW5 271 aa6.83□□□□□ -1.32
HDAC8-211ENST00000415409 VPS52Q8N1B4 723 aa6.83□□□□□ -1.32
HDAC8-211ENST00000415409 LZTR1Q8N653 840 aa6.83□□□□□ -1.32
HDAC8-211ENST00000415409 TTC9BQ8N6N2 239 aa6.83□□□□□ -1.32
HDAC8-211ENST00000415409 ATP6V0D2Q8N8Y2 350 aa6.83□□□□□ -1.32
HDAC8-211ENST00000415409 CCNYQ8ND76 341 aa6.83□□□□□ -1.32
HDAC8-211ENST00000415409 STKLD1Q8NE28 680 aa6.83□□□□□ -1.32
HDAC8-211ENST00000415409 ZNF461Q8TAF7 563 aa6.83□□□□□ -1.32
HDAC8-211ENST00000415409 GPR152Q8TDT2 470 aa6.83□□□□□ -1.32
HDAC8-211ENST00000415409 HTR3CQ8WXA8 447 aa6.83□□□□□ -1.32
HDAC8-211ENST00000415409 CPT1BQ92523 772 aa6.83□□□□□ -1.32
HDAC8-211ENST00000415409 PRCCQ92733 491 aaPredicted RBP6.83□□□□□ -1.32
HDAC8-211ENST00000415409 BADQ92934 168 aa6.83□□□□□ -1.32
HDAC8-211ENST00000415409 ZBTB9Q96C00 473 aa6.83□□□□□ -1.32
HDAC8-211ENST00000415409 TBC1D31Q96DN5 1066 aa6.83□□□□□ -1.32
HDAC8-211ENST00000415409 FCRL2Q96LA5 508 aaPredicted RBP6.83□□□□□ -1.32
HDAC8-211ENST00000415409 RBM15Q96T37 977 aaKnown RBP eCLIP6.83□□□□□ -1.32
HDAC8-211ENST00000415409 RAD9AQ99638 391 aa6.83□□□□□ -1.32
HDAC8-211ENST00000415409 CLSTN3Q9BQT9 956 aa6.83□□□□□ -1.32
HDAC8-211ENST00000415409 TTLL2Q9BWV7 592 aa6.83□□□□□ -1.32
HDAC8-211ENST00000415409 MAGEB5Q9BZ81 275 aa6.83□□□□□ -1.32
HDAC8-211ENST00000415409 UBE2OQ9C0C9 1292 aaKnown RBP6.83□□□□□ -1.32
HDAC8-211ENST00000415409 PHACTR1Q9C0D0 580 aa6.83□□□□□ -1.32
HDAC8-211ENST00000415409 SIK2Q9H0K1 926 aa6.83□□□□□ -1.32
HDAC8-211ENST00000415409 MTIF3Q9H2K0 278 aaKnown RBP6.83□□□□□ -1.32
HDAC8-211ENST00000415409 ADAM7Q9H2U9 754 aa6.83□□□□□ -1.32
HDAC8-211ENST00000415409 KDM4CQ9H3R0 1056 aa6.83□□□□□ -1.32
HDAC8-211ENST00000415409 SEMA4AQ9H3S1 761 aa6.83□□□□□ -1.32
HDAC8-211ENST00000415409 CATSPERBQ9H7T0 1116 aa6.83□□□□□ -1.32
HDAC8-211ENST00000415409 ZNF395Q9H8N7 513 aaPredicted RBP6.83□□□□□ -1.32
HDAC8-211ENST00000415409 CYP4F11Q9HBI6 524 aa6.83□□□□□ -1.32
HDAC8-211ENST00000415409 USP29Q9HBJ7 922 aa6.83□□□□□ -1.32
HDAC8-211ENST00000415409 SAYSD1Q9NPB0 183 aa6.83□□□□□ -1.32
HDAC8-211ENST00000415409 TMPRSS4Q9NRS4 437 aa6.83□□□□□ -1.32
HDAC8-211ENST00000415409 RAB6BQ9NRW1 208 aa6.83□□□□□ -1.32
HDAC8-211ENST00000415409 ETNK2Q9NVF9 386 aa6.83□□□□□ -1.32
HDAC8-211ENST00000415409 MTPAPQ9NVV4 582 aaKnown RBP eCLIP6.83□□□□□ -1.32
HDAC8-211ENST00000415409 GOLGA6AQ9NYA3 693 aa6.83□□□□□ -1.32
HDAC8-211ENST00000415409 DONSONQ9NYP3 566 aa6.83□□□□□ -1.32
HDAC8-211ENST00000415409 TRPM5Q9NZQ8 1165 aa6.83□□□□□ -1.32
HDAC8-211ENST00000415409 MARCH2Q9P0N8 246 aa6.83□□□□□ -1.32
HDAC8-211ENST00000415409 VPS18Q9P253 973 aa6.83□□□□□ -1.32
HDAC8-211ENST00000415409 FNIP2Q9P278 1114 aa6.83□□□□□ -1.32
HDAC8-211ENST00000415409 SFMBT1Q9UHJ3 866 aa6.83□□□□□ -1.32
HDAC8-211ENST00000415409 MAGED2Q9UNF1 606 aaPredicted RBP6.83□□□□□ -1.32
HDAC8-211ENST00000415409 INSL6Q9Y581 213 aa6.83□□□□□ -1.32
HDAC8-211ENST00000415409 FRMPD3Q5JV73 1810 aa6.83□□□□□ -1.32
HDAC8-211ENST00000415409 A0A0A0MRY4 1105 aa6.82□□□□□ -1.32
HDAC8-211ENST00000415409 SLC12A8A0AV02 714 aa6.82□□□□□ -1.32
HDAC8-211ENST00000415409 KCNU1A8MYU2 1149 aa6.82□□□□□ -1.32
HDAC8-211ENST00000415409 HMGB1P1B2RPK0 211 aaPredicted RBP6.82□□□□□ -1.32
HDAC8-211ENST00000415409 E7EVH7 732 aa6.82□□□□□ -1.32
HDAC8-211ENST00000415409 H0YGN5 161 aa6.82□□□□□ -1.32
HDAC8-211ENST00000415409 ALOX15BO15296 676 aa6.82□□□□□ -1.32
HDAC8-211ENST00000415409 CHADO15335 359 aa6.82□□□□□ -1.32
HDAC8-211ENST00000415409 TP73O15350 636 aa6.82□□□□□ -1.32
HDAC8-211ENST00000415409 MSI1O43347 362 aaKnown RBP6.82□□□□□ -1.32
HDAC8-211ENST00000415409 MFSD11O43934 449 aa6.82□□□□□ -1.32
HDAC8-211ENST00000415409 OPHN1O60890 802 aa6.82□□□□□ -1.32
HDAC8-211ENST00000415409 FGF18O76093 207 aa6.82□□□□□ -1.32
HDAC8-211ENST00000415409 LRIG2O94898 1065 aa6.82□□□□□ -1.32
HDAC8-211ENST00000415409 MAP3K6O95382 1288 aa6.82□□□□□ -1.32
HDAC8-211ENST00000415409 TTC4O95801 387 aa6.82□□□□□ -1.32
HDAC8-211ENST00000415409 MOCS2O96007 188 aaPredicted RBP6.82□□□□□ -1.32
HDAC8-211ENST00000415409 IVLP07476 585 aa6.82□□□□□ -1.32
HDAC8-211ENST00000415409 ZDHHC11BP0C7U3 371 aa6.82□□□□□ -1.32
HDAC8-211ENST00000415409 SRGAP2BP0DMP2 458 aa6.82□□□□□ -1.32
HDAC8-211ENST00000415409 ATF6P18850 670 aa6.82□□□□□ -1.32
HDAC8-211ENST00000415409 CA8P35219 290 aa6.82□□□□□ -1.32
HDAC8-211ENST00000415409 FDFT1P37268 417 aa6.82□□□□□ -1.32
HDAC8-211ENST00000415409 PPP3CCP48454 512 aa6.82□□□□□ -1.32
HDAC8-211ENST00000415409 LMAN1P49257 510 aa6.82□□□□□ -1.32
HDAC8-211ENST00000415409 PGFP49763 221 aa6.82□□□□□ -1.32
HDAC8-211ENST00000415409 TUBP50607 506 aa6.82□□□□□ -1.32
HDAC8-211ENST00000415409 EPHB3P54753 998 aa6.82□□□□□ -1.32
HDAC8-211ENST00000415409 MLLT6P55198 1093 aaPredicted RBP6.82□□□□□ -1.32
HDAC8-211ENST00000415409 SARNPP82979 210 aaKnown RBP6.82□□□□□ -1.32
HDAC8-211ENST00000415409 HTRA4P83105 476 aaPredicted RBP6.82□□□□□ -1.32
HDAC8-211ENST00000415409 NRG1Q02297 640 aaPredicted RBP6.82□□□□□ -1.32
HDAC8-211ENST00000415409 ZNF844Q08AG5 666 aa6.82□□□□□ -1.32
HDAC8-211ENST00000415409 AP1B1Q10567 949 aa6.82□□□□□ -1.32
HDAC8-211ENST00000415409 PLD1Q13393 1074 aa6.82□□□□□ -1.32
HDAC8-211ENST00000415409 SLC29A2Q14542 456 aa6.82□□□□□ -1.32
HDAC8-211ENST00000415409 PRKD1Q15139 912 aaPredicted RBP6.82□□□□□ -1.32
HDAC8-211ENST00000415409 HIF1AQ16665 826 aa6.82□□□□□ -1.32
HDAC8-211ENST00000415409 DNAJC21Q5F1R6 531 aaKnown RBP6.82□□□□□ -1.32
HDAC8-211ENST00000415409 AGBL2Q5U5Z8 902 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms