RNA–Protein interactions for RNA: ENST00000409810.6

CHMP3-205, Transcript of charged multivesicular body protein 3, humanhuman

TSL 5

Gene CHMP3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-205ENST00000409810 PLXND1Q9Y4D7 1925 aa11.24□□□□□ -0.61
CHMP3-205ENST00000409810 NYNRINQ9P2P1 1898 aaKnown RBP11.23□□□□□ -0.61
CHMP3-205ENST00000409810 CHD5Q8TDI0 1954 aa11.23□□□□□ -0.61
CHMP3-205ENST00000409810 IGLV3-10A0A075B6K4 115 aa11.23□□□□□ -0.61
CHMP3-205ENST00000409810 TCRBV21S2A2A0A5A6 115 aa11.23□□□□□ -0.61
CHMP3-205ENST00000409810 TMEM191CA6NGB0 347 aa11.23□□□□□ -0.61
CHMP3-205ENST00000409810 DRGXA6NNA5 263 aa11.23□□□□□ -0.61
CHMP3-205ENST00000409810 EIF3CLB5ME19 914 aaKnown RBP11.23□□□□□ -0.61
CHMP3-205ENST00000409810 PROB1E7EW31 1015 aa11.23□□□□□ -0.61
CHMP3-205ENST00000409810 SYNCRIPO60506 623 aaKnown RBP11.23□□□□□ -0.61
CHMP3-205ENST00000409810 LILRB5O75023 590 aa11.23□□□□□ -0.61
CHMP3-205ENST00000409810 SRGAP2O75044 1071 aa11.23□□□□□ -0.61
CHMP3-205ENST00000409810 RHOCP08134 193 aa11.23□□□□□ -0.61
CHMP3-205ENST00000409810 H2AFZP0C0S5 128 aa11.23□□□□□ -0.61
CHMP3-205ENST00000409810 NNMTP40261 264 aa11.23□□□□□ -0.61
CHMP3-205ENST00000409810 CSKP41240 450 aa11.23□□□□□ -0.61
CHMP3-205ENST00000409810 IL12RB1P42701 662 aa11.23□□□□□ -0.61
CHMP3-205ENST00000409810 WASP42768 502 aa11.23□□□□□ -0.61
CHMP3-205ENST00000409810 FNTBP49356 437 aa11.23□□□□□ -0.61
CHMP3-205ENST00000409810 GFPT1Q06210 699 aaPredicted RBP11.23□□□□□ -0.61
CHMP3-205ENST00000409810 PIGHQ14442 188 aaPredicted RBP11.23□□□□□ -0.61
CHMP3-205ENST00000409810 ZNF234Q14588 700 aa11.23□□□□□ -0.61
CHMP3-205ENST00000409810 PLEKHG6Q3KR16 790 aa11.23□□□□□ -0.61
CHMP3-205ENST00000409810 FUT11Q495W5 492 aa11.23□□□□□ -0.61
CHMP3-205ENST00000409810 FNDC3BQ53EP0 1204 aaKnown RBP11.23□□□□□ -0.61
CHMP3-205ENST00000409810 PITRM1Q5JRX3 1037 aa11.23□□□□□ -0.61
CHMP3-205ENST00000409810 SH3PXD2AQ5TCZ1 1133 aa11.23□□□□□ -0.61
CHMP3-205ENST00000409810 RNF219Q5W0B1 726 aaPredicted RBP11.23□□□□□ -0.61
CHMP3-205ENST00000409810 ANO7Q6IWH7 933 aa11.23□□□□□ -0.61
CHMP3-205ENST00000409810 TMEM92Q6UXU6 159 aa11.23□□□□□ -0.61
CHMP3-205ENST00000409810 H2AFVQ71UI9 128 aa11.23□□□□□ -0.61
CHMP3-205ENST00000409810 C14orf80Q86SX3 495 aa11.23□□□□□ -0.61
CHMP3-205ENST00000409810 SETD3Q86TU7 594 aaPredicted RBP11.23□□□□□ -0.61
CHMP3-205ENST00000409810 CIR1Q86X95 450 aaPredicted RBP11.23□□□□□ -0.61
CHMP3-205ENST00000409810 DNAAF5Q86Y56 855 aa11.23□□□□□ -0.61
CHMP3-205ENST00000409810 CCDC185Q8N715 623 aa11.23□□□□□ -0.61
CHMP3-205ENST00000409810 NKD2Q969F2 451 aaPredicted RBP11.23□□□□□ -0.61
CHMP3-205ENST00000409810 TTC17Q96AE7 1141 aa11.23□□□□□ -0.61
CHMP3-205ENST00000409810 TBC1D31Q96DN5 1066 aa11.23□□□□□ -0.61
CHMP3-205ENST00000409810 LMLNQ96KR4 655 aa11.23□□□□□ -0.61
CHMP3-205ENST00000409810 EIF3CQ99613 913 aaKnown RBP11.23□□□□□ -0.61
CHMP3-205ENST00000409810 NUP85Q9BW27 656 aa11.23□□□□□ -0.61
CHMP3-205ENST00000409810 ZYG11BQ9C0D3 744 aa11.23□□□□□ -0.61
CHMP3-205ENST00000409810 THAP2Q9H0W7 228 aa11.23□□□□□ -0.61
CHMP3-205ENST00000409810 ZDHHC4Q9NPG8 344 aa11.23□□□□□ -0.61
CHMP3-205ENST00000409810 CACNA2D2Q9NY47 1150 aa11.23□□□□□ -0.61
CHMP3-205ENST00000409810 OR12D3Q9UGF7 316 aa11.23□□□□□ -0.61
CHMP3-205ENST00000409810 LCMT1Q9UIC8 334 aa11.23□□□□□ -0.61
CHMP3-205ENST00000409810 RAB23Q9ULC3 237 aa11.23□□□□□ -0.61
CHMP3-205ENST00000409810 R4GN57 208 aa11.23□□□□□ -0.61
CHMP3-205ENST00000409810 RALGAPA1Q6GYQ0 2036 aa11.23□□□□□ -0.61
CHMP3-205ENST00000409810 ANTXRLA6NF34 631 aa11.22□□□□□ -0.61
CHMP3-205ENST00000409810 I6L893 689 aaPredicted RBP11.22□□□□□ -0.61
CHMP3-205ENST00000409810 PRPSAP2O60256 369 aa11.22□□□□□ -0.61
CHMP3-205ENST00000409810 CYP1A2P05177 515 aa11.22□□□□□ -0.61
CHMP3-205ENST00000409810 SRPRAP08240 638 aaKnown RBP11.22□□□□□ -0.61
CHMP3-205ENST00000409810 OR1E1P30953 314 aa11.22□□□□□ -0.61
CHMP3-205ENST00000409810 HTR7P34969 479 aa11.22□□□□□ -0.61
CHMP3-205ENST00000409810 GALCP54803 685 aa11.22□□□□□ -0.61
CHMP3-205ENST00000409810 OGDHQ02218 1023 aa11.22□□□□□ -0.61
CHMP3-205ENST00000409810 ENPP2Q13822 863 aa11.22□□□□□ -0.61
CHMP3-205ENST00000409810 BYSLQ13895 437 aaKnown RBP11.22□□□□□ -0.61
CHMP3-205ENST00000409810 ASTE1Q2TB18 679 aaPredicted RBP11.22□□□□□ -0.61
CHMP3-205ENST00000409810 USP39Q53GS9 565 aaKnown RBP11.22□□□□□ -0.61
CHMP3-205ENST00000409810 FSCBQ5H9T9 825 aa11.22□□□□□ -0.61
CHMP3-205ENST00000409810 TMEM215Q68D42 235 aa11.22□□□□□ -0.61
CHMP3-205ENST00000409810 CXorf57Q6NSI4 855 aaKnown RBP11.22□□□□□ -0.61
CHMP3-205ENST00000409810 RWDD4Q6NW29 188 aaKnown RBP11.22□□□□□ -0.61
CHMP3-205ENST00000409810 THADAQ6YHU6 1953 aa11.22□□□□□ -0.61
CHMP3-205ENST00000409810 ZNF783Q6ZMS7 281 aa11.22□□□□□ -0.61
CHMP3-205ENST00000409810 CEP68Q76N32 757 aa11.22□□□□□ -0.61
CHMP3-205ENST00000409810 C11orf74Q86VG3 221 aa11.22□□□□□ -0.61
CHMP3-205ENST00000409810 RASSF3Q86WH2 238 aa11.22□□□□□ -0.61
CHMP3-205ENST00000409810 ZNF683Q8IZ20 524 aa11.22□□□□□ -0.61
CHMP3-205ENST00000409810 PGBD3Q8N328 593 aa11.22□□□□□ -0.61
CHMP3-205ENST00000409810 TC2NQ8N9U0 490 aa11.22□□□□□ -0.61
CHMP3-205ENST00000409810 KDM1BQ8NB78 822 aa11.22□□□□□ -0.61
CHMP3-205ENST00000409810 ZNF564Q8TBZ8 553 aaPredicted RBP11.22□□□□□ -0.61
CHMP3-205ENST00000409810 CYB5D2Q8WUJ1 264 aa11.22□□□□□ -0.61
CHMP3-205ENST00000409810 HMGB4Q8WW32 186 aa11.22□□□□□ -0.61
CHMP3-205ENST00000409810 SORCS1Q8WY21 1168 aa11.22□□□□□ -0.61
CHMP3-205ENST00000409810 SPACA7Q96KW9 195 aa11.22□□□□□ -0.61
CHMP3-205ENST00000409810 ACOX2Q99424 681 aa11.22□□□□□ -0.61
CHMP3-205ENST00000409810 EPAS1Q99814 870 aa11.22□□□□□ -0.61
CHMP3-205ENST00000409810 MUC3BQ9H195 1237 aa11.22□□□□□ -0.61
CHMP3-205ENST00000409810 FBRSQ9HAH7 460 aa11.22□□□□□ -0.61
CHMP3-205ENST00000409810 LUC7LQ9NQ29 371 aaKnown RBP11.22□□□□□ -0.61
CHMP3-205ENST00000409810 TMPRSS4Q9NRS4 437 aa11.22□□□□□ -0.61
CHMP3-205ENST00000409810 DONSONQ9NYP3 566 aa11.22□□□□□ -0.61
CHMP3-205ENST00000409810 UVRAGQ9P2Y5 699 aa11.22□□□□□ -0.61
CHMP3-205ENST00000409810 SUN2Q9UH99 717 aa11.22□□□□□ -0.61
CHMP3-205ENST00000409810 IP6K2Q9UHH9 426 aa11.22□□□□□ -0.61
CHMP3-205ENST00000409810 SLC25A13Q9UJS0 675 aa11.22□□□□□ -0.61
CHMP3-205ENST00000409810 ANAPC7Q9UJX3 599 aa11.22□□□□□ -0.61
CHMP3-205ENST00000409810 VPS28Q9UK41 221 aa11.22□□□□□ -0.61
CHMP3-205ENST00000409810 HCN2Q9UL51 889 aa11.22□□□□□ -0.61
CHMP3-205ENST00000409810 NENFQ9UMX5 172 aa11.22□□□□□ -0.61
CHMP3-205ENST00000409810 TBC1D30Q9Y2I9 924 aa11.22□□□□□ -0.61
CHMP3-205ENST00000409810 SNX10Q9Y5X0 201 aa11.22□□□□□ -0.61
CHMP3-205ENST00000409810 MYO15AQ9UKN7 3530 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms