RNA–Protein interactions for RNA: ENST00000407622.2

COL23A1-202, Transcript of collagen type XXIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL23A1, Length 2,329 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1-202ENST00000407622 KIF1CO43896 1103 aaKnown RBP16.97■□□□□ 0.31
COL23A1-202ENST00000407622 HUS1O60921 280 aa16.97■□□□□ 0.31
COL23A1-202ENST00000407622 TM7SF2O76062 418 aa16.97■□□□□ 0.31
COL23A1-202ENST00000407622 STK10O94804 968 aaKnown RBP16.97■□□□□ 0.31
COL23A1-202ENST00000407622 NPR3P17342 541 aa16.97■□□□□ 0.31
COL23A1-202ENST00000407622 NOS2P35228 1153 aa16.97■□□□□ 0.31
COL23A1-202ENST00000407622 CPOXP36551 454 aa16.97■□□□□ 0.31
COL23A1-202ENST00000407622 PDK1Q15118 436 aa16.97■□□□□ 0.31
COL23A1-202ENST00000407622 STXBP5Q5T5C0 1151 aa16.97■□□□□ 0.31
COL23A1-202ENST00000407622 WSCD1Q658N2 575 aa16.97■□□□□ 0.31
COL23A1-202ENST00000407622 ZNF467Q7Z7K2 595 aaPredicted RBP16.97■□□□□ 0.31
COL23A1-202ENST00000407622 PLD6Q8N2A8 252 aaKnown RBP16.97■□□□□ 0.31
COL23A1-202ENST00000407622 CERS2Q96G23 380 aa16.97■□□□□ 0.31
COL23A1-202ENST00000407622 TINF2Q9BSI4 451 aa16.97■□□□□ 0.31
COL23A1-202ENST00000407622 KRT82Q9NSB4 513 aa16.97■□□□□ 0.31
COL23A1-202ENST00000407622 SHROOM3Q8TF72 1996 aa16.97■□□□□ 0.31
COL23A1-202ENST00000407622 DPPA5A6NC42 116 aa16.97■□□□□ 0.31
COL23A1-202ENST00000407622 MAP3K7CLP57077 242 aa16.97■□□□□ 0.31
COL23A1-202ENST00000407622 MXRA7P84157 204 aa16.97■□□□□ 0.31
COL23A1-202ENST00000407622 SLC25A3Q00325 362 aa16.97■□□□□ 0.31
COL23A1-202ENST00000407622 DEUP1Q05D60 604 aa16.97■□□□□ 0.31
COL23A1-202ENST00000407622 IFRD2Q12894 506 aaPredicted RBP16.97■□□□□ 0.31
COL23A1-202ENST00000407622 PAFAH1B3Q15102 231 aaKnown RBP16.97■□□□□ 0.31
COL23A1-202ENST00000407622 TNS4Q8IZW8 715 aa16.97■□□□□ 0.31
COL23A1-202ENST00000407622 ARHGAP24Q8N264 748 aa16.97■□□□□ 0.31
COL23A1-202ENST00000407622 NPWQ8N729 165 aa16.97■□□□□ 0.31
COL23A1-202ENST00000407622 TNIP3Q96KP6 325 aa16.97■□□□□ 0.31
COL23A1-202ENST00000407622 ZFP42Q96MM3 310 aa16.97■□□□□ 0.31
COL23A1-202ENST00000407622 AGAP2Q99490 1192 aa16.97■□□□□ 0.31
COL23A1-202ENST00000407622 SHCBP1LQ9BZQ2 653 aa16.97■□□□□ 0.31
COL23A1-202ENST00000407622 NRCAMQ92823 1304 aa16.97■□□□□ 0.31
COL23A1-202ENST00000407622 MBLAC1A4D2B0 266 aaPredicted RBP16.96■□□□□ 0.31
COL23A1-202ENST00000407622 KCNE1P15382 129 aa16.96■□□□□ 0.31
COL23A1-202ENST00000407622 PTPN3P26045 913 aa16.96■□□□□ 0.31
COL23A1-202ENST00000407622 TYK2P29597 1187 aa16.96■□□□□ 0.31
COL23A1-202ENST00000407622 XKR4Q5GH76 650 aa16.96■□□□□ 0.31
COL23A1-202ENST00000407622 GPRIN1Q7Z2K8 1008 aa16.96■□□□□ 0.31
COL23A1-202ENST00000407622 WDR75Q8IWA0 830 aaKnown RBP16.96■□□□□ 0.31
COL23A1-202ENST00000407622 DCLK2Q8N568 766 aa16.96■□□□□ 0.31
COL23A1-202ENST00000407622 SMG8Q8ND04 991 aaKnown RBP16.96■□□□□ 0.31
COL23A1-202ENST00000407622 SLC7A14Q8TBB6 771 aa16.96■□□□□ 0.31
COL23A1-202ENST00000407622 SNX15Q9NRS6 342 aa16.96■□□□□ 0.31
COL23A1-202ENST00000407622 TMEM30AQ9NV96 361 aa16.96■□□□□ 0.31
COL23A1-202ENST00000407622 IGSF9Q9P2J2 1179 aa16.96■□□□□ 0.31
COL23A1-202ENST00000407622 COPG2Q9UBF2 871 aa16.96■□□□□ 0.31
COL23A1-202ENST00000407622 DCDC2Q9UHG0 476 aa16.96■□□□□ 0.31
COL23A1-202ENST00000407622 IPPQ9Y573 584 aa16.96■□□□□ 0.31
COL23A1-202ENST00000407622 SNX10Q9Y5X0 201 aa16.96■□□□□ 0.31
COL23A1-202ENST00000407622 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.96■□□□□ 0.3
COL23A1-202ENST00000407622 SMIM35A0A1B0GVV1 85 aa16.96■□□□□ 0.3
COL23A1-202ENST00000407622 MEIS3P2A8K0S8 358 aa16.96■□□□□ 0.3
COL23A1-202ENST00000407622 TREHO43280 583 aa16.96■□□□□ 0.3
COL23A1-202ENST00000407622 STRNO43815 780 aa16.96■□□□□ 0.3
COL23A1-202ENST00000407622 NEBLO76041 1014 aa16.96■□□□□ 0.3
COL23A1-202ENST00000407622 SERPINE1P05121 402 aa16.96■□□□□ 0.3
COL23A1-202ENST00000407622 PTPN1P18031 435 aaKnown RBP16.96■□□□□ 0.3
COL23A1-202ENST00000407622 ERCC2P18074 760 aa16.96■□□□□ 0.3
COL23A1-202ENST00000407622 AOC1P19801 751 aa16.96■□□□□ 0.3
COL23A1-202ENST00000407622 WARSP23381 471 aaKnown RBP16.96■□□□□ 0.3
COL23A1-202ENST00000407622 TKTL1P51854 596 aa16.96■□□□□ 0.3
COL23A1-202ENST00000407622 ITGA9Q13797 1035 aa16.96■□□□□ 0.3
COL23A1-202ENST00000407622 DLG2Q15700 870 aa16.96■□□□□ 0.3
COL23A1-202ENST00000407622 SV2CQ496J9 727 aa16.96■□□□□ 0.3
COL23A1-202ENST00000407622 NET1Q7Z628 596 aaPredicted RBP16.96■□□□□ 0.3
COL23A1-202ENST00000407622 PSTKQ8IV42 348 aaKnown RBP16.96■□□□□ 0.3
COL23A1-202ENST00000407622 LMNTD2Q8IXW0 634 aa16.96■□□□□ 0.3
COL23A1-202ENST00000407622 WNT8BQ93098 351 aa16.96■□□□□ 0.3
COL23A1-202ENST00000407622 ZNF669Q96BR6 464 aaPredicted RBP16.96■□□□□ 0.3
COL23A1-202ENST00000407622 SLC2A13Q96QE2 648 aa16.96■□□□□ 0.3
COL23A1-202ENST00000407622 SYT15Q9BQS2 421 aa16.96■□□□□ 0.3
COL23A1-202ENST00000407622 ABHD16BQ9H3Z7 469 aa16.96■□□□□ 0.3
COL23A1-202ENST00000407622 CAB39LQ9H9S4 337 aa16.96■□□□□ 0.3
COL23A1-202ENST00000407622 LRRC4Q9HBW1 653 aa16.96■□□□□ 0.3
COL23A1-202ENST00000407622 KLHL8Q9P2G9 620 aaPredicted RBP16.96■□□□□ 0.3
COL23A1-202ENST00000407622 DOCK3Q8IZD9 2030 aa16.95■□□□□ 0.3
COL23A1-202ENST00000407622 YJEFN3A6XGL0 299 aa16.95■□□□□ 0.3
COL23A1-202ENST00000407622 ZNF195O14628 629 aa16.95■□□□□ 0.3
COL23A1-202ENST00000407622 PTGESO14684 152 aa16.95■□□□□ 0.3
COL23A1-202ENST00000407622 PPP1R12AO14974 1030 aaPredicted RBP16.95■□□□□ 0.3
COL23A1-202ENST00000407622 MAP3K13O43283 966 aa16.95■□□□□ 0.3
COL23A1-202ENST00000407622 SIN3BO75182 1162 aa16.95■□□□□ 0.3
COL23A1-202ENST00000407622 SORBS2O94875 1100 aaKnown RBP16.95■□□□□ 0.3
COL23A1-202ENST00000407622 F2P00734 622 aa16.95■□□□□ 0.3
COL23A1-202ENST00000407622 POLBP06746 335 aa16.95■□□□□ 0.3
COL23A1-202ENST00000407622 GP5P40197 560 aa16.95■□□□□ 0.3
COL23A1-202ENST00000407622 PNPLA4P41247 253 aa16.95■□□□□ 0.3
COL23A1-202ENST00000407622 IDH3AP50213 366 aa16.95■□□□□ 0.3
COL23A1-202ENST00000407622 CACNA2D1P54289 1103 aa16.95■□□□□ 0.3
COL23A1-202ENST00000407622 IRF9Q00978 393 aa16.95■□□□□ 0.3
COL23A1-202ENST00000407622 GRB14Q14449 540 aa16.95■□□□□ 0.3
COL23A1-202ENST00000407622 RALGPS1Q5JS13 557 aa16.95■□□□□ 0.3
COL23A1-202ENST00000407622 SIX6OS1Q8N1H7 587 aa16.95■□□□□ 0.3
COL23A1-202ENST00000407622 ACVR1CQ8NER5 493 aa16.95■□□□□ 0.3
COL23A1-202ENST00000407622 ATP2A3Q93084 1043 aa16.95■□□□□ 0.3
COL23A1-202ENST00000407622 APOL2Q9BQE5 337 aa16.95■□□□□ 0.3
COL23A1-202ENST00000407622 MED10Q9BTT4 135 aa16.95■□□□□ 0.3
COL23A1-202ENST00000407622 ULBP1Q9BZM6 244 aa16.95■□□□□ 0.3
COL23A1-202ENST00000407622 WDR6Q9NNW5 1121 aaKnown RBP16.95■□□□□ 0.3
COL23A1-202ENST00000407622 CRTAC1Q9NQ79 661 aa16.95■□□□□ 0.3
COL23A1-202ENST00000407622 A0A088AWK7 358 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms