RNA–Protein interactions for RNA: ENST00000399976.6

USP16-204, Transcript of ubiquitin specific peptidase 16, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP16, Length 2,963 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-204ENST00000399976 SMPD4Q9NXE4 827 aa7.75□□□□□ -1.17
USP16-204ENST00000399976 OR12D3Q9UGF7 316 aa7.75□□□□□ -1.17
USP16-204ENST00000399976 FBXL21Q9UKT6 434 aa7.75□□□□□ -1.17
USP16-204ENST00000399976 MMP17Q9ULZ9 603 aa7.75□□□□□ -1.17
USP16-204ENST00000399976 ZKSCAN5Q9Y2L8 839 aa7.75□□□□□ -1.17
USP16-204ENST00000399976 ZNF106Q9H2Y7 1883 aaKnown RBP7.75□□□□□ -1.17
USP16-204ENST00000399976 LAMA3Q16787 3333 aa7.75□□□□□ -1.17
USP16-204ENST00000399976 I6L893 689 aaPredicted RBP7.74□□□□□ -1.17
USP16-204ENST00000399976 ATP9BO43861 1147 aa7.74□□□□□ -1.17
USP16-204ENST00000399976 KAT7O95251 611 aa7.74□□□□□ -1.17
USP16-204ENST00000399976 PABPC1P11940 636 aaKnown RBP7.74□□□□□ -1.17
USP16-204ENST00000399976 HSPA9P38646 679 aaKnown RBP7.74□□□□□ -1.17
USP16-204ENST00000399976 SFSWAPQ12872 951 aaKnown RBP7.74□□□□□ -1.17
USP16-204ENST00000399976 C15orf59Q2T9L4 293 aaPredicted RBP7.74□□□□□ -1.17
USP16-204ENST00000399976 INO80DQ53TQ3 878 aaPredicted RBP7.74□□□□□ -1.17
USP16-204ENST00000399976 BZW1Q7L1Q6 419 aaKnown RBP7.74□□□□□ -1.17
USP16-204ENST00000399976 CCAR2Q8N163 923 aaKnown RBP7.74□□□□□ -1.17
USP16-204ENST00000399976 USP33Q8TEY7 942 aa7.74□□□□□ -1.17
USP16-204ENST00000399976 TSGA13Q96PP4 275 aa7.74□□□□□ -1.17
USP16-204ENST00000399976 LINC00597Q9H2U6 94 aa7.74□□□□□ -1.17
USP16-204ENST00000399976 HAUS2Q9NVX0 235 aa7.74□□□□□ -1.17
USP16-204ENST00000399976 GGA2Q9UJY4 613 aa7.74□□□□□ -1.17
USP16-204ENST00000399976 PCDHA3Q9Y5H8 950 aa7.74□□□□□ -1.17
USP16-204ENST00000399976 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP7.74□□□□□ -1.17
USP16-204ENST00000399976 K7EQS6 105 aa7.74□□□□□ -1.17
USP16-204ENST00000399976 PIK3R2O00459 728 aa7.74□□□□□ -1.17
USP16-204ENST00000399976 DCLK1O15075 740 aa7.74□□□□□ -1.17
USP16-204ENST00000399976 GRAP2O75791 330 aa7.74□□□□□ -1.17
USP16-204ENST00000399976 ATP5BP06576 529 aaKnown RBP7.74□□□□□ -1.17
USP16-204ENST00000399976 TFE3P19532 575 aaPredicted RBP7.74□□□□□ -1.17
USP16-204ENST00000399976 MSNP26038 577 aaKnown RBP7.74□□□□□ -1.17
USP16-204ENST00000399976 NR2C2P49116 596 aa7.74□□□□□ -1.17
USP16-204ENST00000399976 GALK1P51570 392 aa7.74□□□□□ -1.17
USP16-204ENST00000399976 SUOXP51687 545 aa7.74□□□□□ -1.17
USP16-204ENST00000399976 ZNF177Q13360 481 aaPredicted RBP7.74□□□□□ -1.17
USP16-204ENST00000399976 GRM3Q14832 879 aa7.74□□□□□ -1.17
USP16-204ENST00000399976 SPDYCQ5MJ68 293 aa7.74□□□□□ -1.17
USP16-204ENST00000399976 SLC9A4Q6AI14 798 aa7.74□□□□□ -1.17
USP16-204ENST00000399976 RCOR2Q8IZ40 523 aa7.74□□□□□ -1.17
USP16-204ENST00000399976 LGI2Q8N0V4 545 aa7.74□□□□□ -1.17
USP16-204ENST00000399976 CCDC185Q8N715 623 aa7.74□□□□□ -1.17
USP16-204ENST00000399976 TRIM58Q8NG06 486 aa7.74□□□□□ -1.17
USP16-204ENST00000399976 RNF34Q969K3 372 aa7.74□□□□□ -1.17
USP16-204ENST00000399976 LRIG1Q96JA1 1093 aa7.74□□□□□ -1.17
USP16-204ENST00000399976 PEBP4Q96S96 227 aa7.74□□□□□ -1.17
USP16-204ENST00000399976 PACSIN1Q9BY11 444 aa7.74□□□□□ -1.17
USP16-204ENST00000399976 SEMA4AQ9H3S1 761 aa7.74□□□□□ -1.17
USP16-204ENST00000399976 LRRC19Q9H756 370 aa7.74□□□□□ -1.17
USP16-204ENST00000399976 HEBP1Q9NRV9 189 aa7.74□□□□□ -1.17
USP16-204ENST00000399976 ABCB8Q9NUT2 735 aa7.74□□□□□ -1.17
USP16-204ENST00000399976 SUN2Q9UH99 717 aa7.74□□□□□ -1.17
USP16-204ENST00000399976 MYOFQ9NZM1 2061 aa7.74□□□□□ -1.17
USP16-204ENST00000399976 OTOL1A6NHN0 477 aaPredicted RBP7.74□□□□□ -1.17
USP16-204ENST00000399976 C3orf70A6NLC5 250 aaPredicted RBP7.74□□□□□ -1.17
USP16-204ENST00000399976 TGM2P21980 687 aa7.74□□□□□ -1.17
USP16-204ENST00000399976 CES1P23141 567 aa7.74□□□□□ -1.17
USP16-204ENST00000399976 TARSP26639 723 aaKnown RBP7.74□□□□□ -1.17
USP16-204ENST00000399976 ARL4AP40617 200 aa7.74□□□□□ -1.17
USP16-204ENST00000399976 DPP6P42658 865 aa7.74□□□□□ -1.17
USP16-204ENST00000399976 NRLP54845 237 aa7.74□□□□□ -1.17
USP16-204ENST00000399976 NME3Q13232 169 aa7.74□□□□□ -1.17
USP16-204ENST00000399976 BYSLQ13895 437 aaKnown RBP7.74□□□□□ -1.17
USP16-204ENST00000399976 TMEM31Q5JXX7 168 aa7.74□□□□□ -1.17
USP16-204ENST00000399976 ARMC3Q5W041 872 aa7.74□□□□□ -1.17
USP16-204ENST00000399976 ALG1LQ6GMV1 187 aa7.74□□□□□ -1.17
USP16-204ENST00000399976 ADIPOR2Q86V24 386 aa7.74□□□□□ -1.17
USP16-204ENST00000399976 RASSF3Q86WH2 238 aa7.74□□□□□ -1.17
USP16-204ENST00000399976 SIX5Q8N196 739 aa7.74□□□□□ -1.17
USP16-204ENST00000399976 HES6Q96HZ4 224 aa7.74□□□□□ -1.17
USP16-204ENST00000399976 C2orf49Q9BVC5 232 aaPredicted RBP7.74□□□□□ -1.17
USP16-204ENST00000399976 KLC2Q9H0B6 622 aa7.74□□□□□ -1.17
USP16-204ENST00000399976 TMEM245Q9H330 911 aa7.74□□□□□ -1.17
USP16-204ENST00000399976 ANLNQ9NQW6 1124 aa7.74□□□□□ -1.17
USP16-204ENST00000399976 ARHGEF4Q9NR80 690 aa7.74□□□□□ -1.17
USP16-204ENST00000399976 GTSE1Q9NYZ3 720 aa7.74□□□□□ -1.17
USP16-204ENST00000399976 SIT1Q9Y3P8 196 aa7.74□□□□□ -1.17
USP16-204ENST00000399976 TMCO5BA8MYB1 307 aa7.73□□□□□ -1.17
USP16-204ENST00000399976 WASH3PC4AMC7 463 aa7.73□□□□□ -1.17
USP16-204ENST00000399976 GALR2O43603 387 aaPredicted RBP7.73□□□□□ -1.17
USP16-204ENST00000399976 KDELR3O43731 214 aa7.73□□□□□ -1.17
USP16-204ENST00000399976 TBL1XO60907 577 aa7.73□□□□□ -1.17
USP16-204ENST00000399976 LRIG2O94898 1065 aa7.73□□□□□ -1.17
USP16-204ENST00000399976 GSRP00390 522 aa7.73□□□□□ -1.17
USP16-204ENST00000399976 IRF1P10914 325 aa7.73□□□□□ -1.17
USP16-204ENST00000399976 DGKEP52429 567 aa7.73□□□□□ -1.17
USP16-204ENST00000399976 XRCC4Q13426 336 aa7.73□□□□□ -1.17
USP16-204ENST00000399976 CAMK2GQ13555 558 aaPredicted RBP7.73□□□□□ -1.17
USP16-204ENST00000399976 TFDP2Q14188 446 aa7.73□□□□□ -1.17
USP16-204ENST00000399976 PLEKHG6Q3KR16 790 aa7.73□□□□□ -1.17
USP16-204ENST00000399976 RAP1GAP2Q684P5 730 aa7.73□□□□□ -1.17
USP16-204ENST00000399976 RFX8Q6ZV50 586 aa7.73□□□□□ -1.17
USP16-204ENST00000399976 KIAA1328Q86T90 577 aa7.73□□□□□ -1.17
USP16-204ENST00000399976 WDR5BQ86VZ2 330 aa7.73□□□□□ -1.17
USP16-204ENST00000399976 FAM131BQ86XD5 332 aa7.73□□□□□ -1.17
USP16-204ENST00000399976 MFN1Q8IWA4 741 aa7.73□□□□□ -1.17
USP16-204ENST00000399976 DDI1Q8WTU0 396 aa7.73□□□□□ -1.17
USP16-204ENST00000399976 ALS2CR12Q96Q35 445 aa7.73□□□□□ -1.17
USP16-204ENST00000399976 PCDH18Q9HCL0 1135 aa7.73□□□□□ -1.17
USP16-204ENST00000399976 C11orf16Q9NQ32 467 aa7.73□□□□□ -1.17
USP16-204ENST00000399976 DNAJC17Q9NVM6 304 aaKnown RBP7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms