RNA–Protein interactions for RNA: ENST00000397443.6

CPNE1-204, Transcript of copine 1, humanhuman

APPRIS P1 TSL 5

Gene CPNE1, Length 1,928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-204ENST00000397443 SERPINB6P35237 376 aa21.78■■□□□ 1.08
CPNE1-204ENST00000397443 VIPR2P41587 438 aa21.78■■□□□ 1.08
CPNE1-204ENST00000397443 NR2C2P49116 596 aa21.78■■□□□ 1.08
CPNE1-204ENST00000397443 TERF1P54274 439 aa21.78■■□□□ 1.08
CPNE1-204ENST00000397443 NRLP54845 237 aa21.78■■□□□ 1.08
CPNE1-204ENST00000397443 PPP1R7Q15435 360 aa21.78■■□□□ 1.08
CPNE1-204ENST00000397443 OASLQ15646 514 aaKnown RBP21.78■■□□□ 1.08
CPNE1-204ENST00000397443 RABGAP1LQ5R372 815 aa21.78■■□□□ 1.08
CPNE1-204ENST00000397443 TPGS1Q6ZTW0 290 aa21.78■■□□□ 1.08
CPNE1-204ENST00000397443 JAMLQ86YT9 394 aa21.78■■□□□ 1.08
CPNE1-204ENST00000397443 NKD2Q969F2 451 aaPredicted RBP21.78■■□□□ 1.08
CPNE1-204ENST00000397443 DDX50Q9BQ39 737 aaKnown RBP21.78■■□□□ 1.08
CPNE1-204ENST00000397443 S1PR5Q9H228 398 aa21.78■■□□□ 1.08
CPNE1-204ENST00000397443 ANKZF1Q9H8Y5 726 aa21.78■■□□□ 1.08
CPNE1-204ENST00000397443 PPARGC1AQ9UBK2 798 aaKnown RBP21.78■■□□□ 1.08
CPNE1-204ENST00000397443 ESYT3A0FGR9 886 aa21.78■■□□□ 1.08
CPNE1-204ENST00000397443 DRGXA6NNA5 263 aa21.78■■□□□ 1.08
CPNE1-204ENST00000397443 RHOQP17081 205 aa21.78■■□□□ 1.08
CPNE1-204ENST00000397443 PTGIRP43119 386 aa21.78■■□□□ 1.08
CPNE1-204ENST00000397443 VPS41P49754 854 aa21.78■■□□□ 1.08
CPNE1-204ENST00000397443 GDF10P55107 478 aa21.78■■□□□ 1.08
CPNE1-204ENST00000397443 FAM78AQ5JUQ0 283 aa21.78■■□□□ 1.08
CPNE1-204ENST00000397443 ACBD5Q5T8D3 534 aaPredicted RBP21.78■■□□□ 1.08
CPNE1-204ENST00000397443 NLRP14Q86W24 1093 aa21.78■■□□□ 1.08
CPNE1-204ENST00000397443 DDX42Q86XP3 938 aaKnown RBP eCLIP21.78■■□□□ 1.08
CPNE1-204ENST00000397443 DEPDC1BQ8WUY9 529 aa21.78■■□□□ 1.08
CPNE1-204ENST00000397443 MYLIPQ8WY64 445 aa21.78■■□□□ 1.08
CPNE1-204ENST00000397443 ETS1P14921 441 aa21.77■■□□□ 1.08
CPNE1-204ENST00000397443 GUCY2DQ02846 1103 aa21.77■■□□□ 1.08
CPNE1-204ENST00000397443 AP1B1Q10567 949 aa21.77■■□□□ 1.08
CPNE1-204ENST00000397443 DHX34Q14147 1143 aaKnown RBP21.77■■□□□ 1.08
CPNE1-204ENST00000397443 FAM71DQ8N9W8 422 aa21.77■■□□□ 1.08
CPNE1-204ENST00000397443 RSAD2Q8WXG1 361 aa21.77■■□□□ 1.08
CPNE1-204ENST00000397443 PPM1EQ8WY54 764 aa21.77■■□□□ 1.08
CPNE1-204ENST00000397443 FRMD8P1Q9BZ68 369 aaPredicted RBP21.77■■□□□ 1.08
CPNE1-204ENST00000397443 KLC2Q9H0B6 622 aa21.77■■□□□ 1.08
CPNE1-204ENST00000397443 PRDM16Q9HAZ2 1276 aa21.77■■□□□ 1.08
CPNE1-204ENST00000397443 STOML2Q9UJZ1 356 aa21.77■■□□□ 1.08
CPNE1-204ENST00000397443 SOBPA7XYQ1 873 aa21.76■■□□□ 1.07
CPNE1-204ENST00000397443 H3BQ06 376 aaPredicted RBP21.76■■□□□ 1.07
CPNE1-204ENST00000397443 POU3F3P20264 500 aaPredicted RBP21.76■■□□□ 1.07
CPNE1-204ENST00000397443 SP100P23497 879 aaPredicted RBP21.76■■□□□ 1.07
CPNE1-204ENST00000397443 RBL1P28749 1068 aa21.76■■□□□ 1.07
CPNE1-204ENST00000397443 OR1E1P30953 314 aa21.76■■□□□ 1.07
CPNE1-204ENST00000397443 DRICH1Q6PGQ1 229 aaPredicted RBP21.76■■□□□ 1.07
CPNE1-204ENST00000397443 GLIS1Q8NBF1 620 aa21.76■■□□□ 1.07
CPNE1-204ENST00000397443 GRK7Q8WTQ7 553 aa21.76■■□□□ 1.07
CPNE1-204ENST00000397443 PABPC5Q96DU9 382 aaKnown RBP21.76■■□□□ 1.07
CPNE1-204ENST00000397443 OLFM3Q96PB7 478 aa21.76■■□□□ 1.07
CPNE1-204ENST00000397443 TMEM248Q9NWD8 314 aa21.76■■□□□ 1.07
CPNE1-204ENST00000397443 PLK2Q9NYY3 685 aa21.76■■□□□ 1.07
CPNE1-204ENST00000397443 ZMYM5Q9UJ78 669 aa21.76■■□□□ 1.07
CPNE1-204ENST00000397443 E2F8A0AVK6 867 aa21.76■■□□□ 1.07
CPNE1-204ENST00000397443 KCNN4O15554 427 aa21.76■■□□□ 1.07
CPNE1-204ENST00000397443 TBL1XO60907 577 aa21.76■■□□□ 1.07
CPNE1-204ENST00000397443 LATS1O95835 1130 aa21.76■■□□□ 1.07
CPNE1-204ENST00000397443 ITGAVP06756 1048 aa21.76■■□□□ 1.07
CPNE1-204ENST00000397443 ZSCAN5DPP0CG00 497 aa21.76■■□□□ 1.07
CPNE1-204ENST00000397443 ZNF77Q15935 545 aa21.76■■□□□ 1.07
CPNE1-204ENST00000397443 GLE1Q53GS7 698 aaKnown RBP21.76■■□□□ 1.07
CPNE1-204ENST00000397443 BZW1Q7L1Q6 419 aaKnown RBP21.76■■□□□ 1.07
CPNE1-204ENST00000397443 ZNF354CQ86Y25 554 aa21.76■■□□□ 1.07
CPNE1-204ENST00000397443 TAB3Q8N5C8 712 aaPredicted RBP21.76■■□□□ 1.07
CPNE1-204ENST00000397443 TDRD5Q8NAT2 981 aaKnown RBP21.76■■□□□ 1.07
CPNE1-204ENST00000397443 TMA16Q96EY4 203 aaKnown RBP21.76■■□□□ 1.07
CPNE1-204ENST00000397443 RUNDC3BQ96NL0 473 aa21.76■■□□□ 1.07
CPNE1-204ENST00000397443 PNKPQ96T60 521 aa21.76■■□□□ 1.07
CPNE1-204ENST00000397443 SLC39A8Q9C0K1 460 aa21.76■■□□□ 1.07
CPNE1-204ENST00000397443 DPH5Q9H2P9 285 aa21.76■■□□□ 1.07
CPNE1-204ENST00000397443 SEPT10Q9P0V9 454 aa21.76■■□□□ 1.07
CPNE1-204ENST00000397443 ZNF510Q9Y2H8 683 aa21.76■■□□□ 1.07
CPNE1-204ENST00000397443 WNT6Q9Y6F9 365 aa21.76■■□□□ 1.07
CPNE1-204ENST00000397443 SHROOM3Q8TF72 1996 aa21.75■■□□□ 1.07
CPNE1-204ENST00000397443 GAS8O95995 478 aa21.75■■□□□ 1.07
CPNE1-204ENST00000397443 GBP2P32456 591 aaPredicted RBP21.75■■□□□ 1.07
CPNE1-204ENST00000397443 TUBB4BP68371 445 aa21.75■■□□□ 1.07
CPNE1-204ENST00000397443 PDK1Q15118 436 aa21.75■■□□□ 1.07
CPNE1-204ENST00000397443 SKIV2LQ15477 1246 aaKnown RBP21.75■■□□□ 1.07
CPNE1-204ENST00000397443 TRADDQ15628 312 aa21.75■■□□□ 1.07
CPNE1-204ENST00000397443 ARHGAP36Q6ZRI8 547 aa21.75■■□□□ 1.07
CPNE1-204ENST00000397443 ARHGAP12Q8IWW6 846 aa21.75■■□□□ 1.07
CPNE1-204ENST00000397443 ALLCQ8N6M5 410 aa21.75■■□□□ 1.07
CPNE1-204ENST00000397443 CELF5Q8N6W0 485 aaKnown RBP21.75■■□□□ 1.07
CPNE1-204ENST00000397443 DDI1Q8WTU0 396 aa21.75■■□□□ 1.07
CPNE1-204ENST00000397443 TFB1MQ8WVM0 346 aaKnown RBP21.75■■□□□ 1.07
CPNE1-204ENST00000397443 RSPRY1Q96DX4 576 aa21.75■■□□□ 1.07
CPNE1-204ENST00000397443 LRRC3BQ96PB8 259 aa21.75■■□□□ 1.07
CPNE1-204ENST00000397443 LINC00597Q9H2U6 94 aa21.75■■□□□ 1.07
CPNE1-204ENST00000397443 EPB41L5Q9HCM4 733 aa21.75■■□□□ 1.07
CPNE1-204ENST00000397443 FEZ2Q9UHY8 353 aaPredicted RBP21.75■■□□□ 1.07
CPNE1-204ENST00000397443 DRG1Q9Y295 367 aaKnown RBP21.75■■□□□ 1.07
CPNE1-204ENST00000397443 MYOFQ9NZM1 2061 aa21.75■■□□□ 1.07
CPNE1-204ENST00000397443 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP21.74■■□□□ 1.07
CPNE1-204ENST00000397443 SLC45A4Q5BKX6 768 aa21.74■■□□□ 1.07
CPNE1-204ENST00000397443 CDKL3Q8IVW4 592 aaPredicted RBP21.74■■□□□ 1.07
CPNE1-204ENST00000397443 CCDC89Q8N998 374 aa21.74■■□□□ 1.07
CPNE1-204ENST00000397443 SMARCD2Q92925 531 aa21.74■■□□□ 1.07
CPNE1-204ENST00000397443 P2RY11Q96G91 374 aa21.74■■□□□ 1.07
CPNE1-204ENST00000397443 RIPOR3Q96MK2 946 aa21.74■■□□□ 1.07
CPNE1-204ENST00000397443 ASB16Q96NS5 453 aa21.74■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms