RNA–Protein interactions for RNA: ENST00000396386.6

CBX3-202, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-202ENST00000396386 MOCS1Q9NZB8 636 aa15.33■□□□□ 0.05
CBX3-202ENST00000396386 ADAM28Q9UKQ2 775 aa15.33■□□□□ 0.05
CBX3-202ENST00000396386 PHTF1Q9UMS5 762 aa15.33■□□□□ 0.05
CBX3-202ENST00000396386 SCML2Q9UQR0 700 aa15.33■□□□□ 0.05
CBX3-202ENST00000396386 PCDHB7Q9Y5E2 793 aa15.33■□□□□ 0.05
CBX3-202ENST00000396386 CAPN7Q9Y6W3 813 aa15.33■□□□□ 0.05
CBX3-202ENST00000396386 NYNRINQ9P2P1 1898 aaKnown RBP15.33■□□□□ 0.04
CBX3-202ENST00000396386 OR6C75A6NL08 312 aa15.33■□□□□ 0.04
CBX3-202ENST00000396386 COPEO14579 308 aa15.33■□□□□ 0.04
CBX3-202ENST00000396386 EDF1O60869 148 aaKnown RBP15.33■□□□□ 0.04
CBX3-202ENST00000396386 PAGE1O75459 146 aa15.33■□□□□ 0.04
CBX3-202ENST00000396386 ALDH1A2O94788 518 aa15.33■□□□□ 0.04
CBX3-202ENST00000396386 CNTFP26441 200 aa15.33■□□□□ 0.04
CBX3-202ENST00000396386 CRADDP78560 199 aa15.33■□□□□ 0.04
CBX3-202ENST00000396386 ZBTB17Q13105 803 aa15.33■□□□□ 0.04
CBX3-202ENST00000396386 CRYMQ14894 314 aa15.33■□□□□ 0.04
CBX3-202ENST00000396386 SPRED3Q2MJR0 410 aa15.33■□□□□ 0.04
CBX3-202ENST00000396386 PLEKHG4Q58EX7 1191 aa15.33■□□□□ 0.04
CBX3-202ENST00000396386 MANEALQ5VSG8 457 aa15.33■□□□□ 0.04
CBX3-202ENST00000396386 MSANTD2Q6P1R3 559 aa15.33■□□□□ 0.04
CBX3-202ENST00000396386 SH2D5Q6ZV89 423 aa15.33■□□□□ 0.04
CBX3-202ENST00000396386 FAM126BQ8IXS8 530 aa15.33■□□□□ 0.04
CBX3-202ENST00000396386 NUP93Q8N1F7 819 aa15.33■□□□□ 0.04
CBX3-202ENST00000396386 ARHGAP18Q8N392 663 aa15.33■□□□□ 0.04
CBX3-202ENST00000396386 CDKL2Q92772 493 aa15.33■□□□□ 0.04
CBX3-202ENST00000396386 CELF6Q96J87 481 aaKnown RBP15.33■□□□□ 0.04
CBX3-202ENST00000396386 GORASP1Q9BQQ3 440 aa15.33■□□□□ 0.04
CBX3-202ENST00000396386 FBXO44Q9H4M3 255 aa15.33■□□□□ 0.04
CBX3-202ENST00000396386 CATSPERBQ9H7T0 1116 aa15.33■□□□□ 0.04
CBX3-202ENST00000396386 NMUR1Q9HB89 426 aa15.33■□□□□ 0.04
CBX3-202ENST00000396386 ABCF3Q9NUQ8 709 aa15.33■□□□□ 0.04
CBX3-202ENST00000396386 MKS1Q9NXB0 559 aa15.33■□□□□ 0.04
CBX3-202ENST00000396386 PRKAG3Q9UGI9 489 aa15.33■□□□□ 0.04
CBX3-202ENST00000396386 SFMBT1Q9UHJ3 866 aa15.33■□□□□ 0.04
CBX3-202ENST00000396386 LRFN2Q9ULH4 789 aa15.33■□□□□ 0.04
CBX3-202ENST00000396386 ZBTB24O43167 697 aaPredicted RBP15.32■□□□□ 0.04
CBX3-202ENST00000396386 UGT1A9O60656 530 aa15.32■□□□□ 0.04
CBX3-202ENST00000396386 GSTA1P08263 222 aa15.32■□□□□ 0.04
CBX3-202ENST00000396386 SRGAP2BP0DMP2 458 aa15.32■□□□□ 0.04
CBX3-202ENST00000396386 MAP2K2P36507 400 aa15.32■□□□□ 0.04
CBX3-202ENST00000396386 CDK7P50613 346 aa15.32■□□□□ 0.04
CBX3-202ENST00000396386 NIPAL4Q0D2K0 466 aa15.32■□□□□ 0.04
CBX3-202ENST00000396386 BMPR2Q13873 1038 aa15.32■□□□□ 0.04
CBX3-202ENST00000396386 ATPAF2Q8N5M1 289 aa15.32■□□□□ 0.04
CBX3-202ENST00000396386 DBF4BQ8NFT6 615 aa15.32■□□□□ 0.04
CBX3-202ENST00000396386 SEPT8Q92599 483 aa15.32■□□□□ 0.04
CBX3-202ENST00000396386 ZNF75CPQ92670 426 aaPredicted RBP15.32■□□□□ 0.04
CBX3-202ENST00000396386 TTC17Q96AE7 1141 aa15.32■□□□□ 0.04
CBX3-202ENST00000396386 VPS11Q9H270 941 aa15.32■□□□□ 0.04
CBX3-202ENST00000396386 UGT1A7Q9HAW7 530 aa15.32■□□□□ 0.04
CBX3-202ENST00000396386 UGT1A10Q9HAW8 530 aa15.32■□□□□ 0.04
CBX3-202ENST00000396386 UGT1A8Q9HAW9 530 aa15.32■□□□□ 0.04
CBX3-202ENST00000396386 PIH1D1Q9NWS0 290 aaKnown RBP15.32■□□□□ 0.04
CBX3-202ENST00000396386 KLHL14Q9P2G3 628 aa15.32■□□□□ 0.04
CBX3-202ENST00000396386 H0YHG0 523 aa15.31■□□□□ 0.04
CBX3-202ENST00000396386 DNM1LO00429 736 aa15.31■□□□□ 0.04
CBX3-202ENST00000396386 ENPP3O14638 875 aa15.31■□□□□ 0.04
CBX3-202ENST00000396386 NFKB1P19838 968 aa15.31■□□□□ 0.04
CBX3-202ENST00000396386 SCTRP47872 440 aa15.31■□□□□ 0.04
CBX3-202ENST00000396386 GPR15P49685 360 aa15.31■□□□□ 0.04
CBX3-202ENST00000396386 PGFP49763 221 aa15.31■□□□□ 0.04
CBX3-202ENST00000396386 TEX44Q53QW1 395 aa15.31■□□□□ 0.04
CBX3-202ENST00000396386 SPANXN3Q5MJ09 141 aa15.31■□□□□ 0.04
CBX3-202ENST00000396386 FAM171A1Q5VUB5 890 aa15.31■□□□□ 0.04
CBX3-202ENST00000396386 RNF43Q68DV7 783 aa15.31■□□□□ 0.04
CBX3-202ENST00000396386 FAM43BQ6ZT52 329 aaPredicted RBP15.31■□□□□ 0.04
CBX3-202ENST00000396386 MON1AQ86VX9 555 aa15.31■□□□□ 0.04
CBX3-202ENST00000396386 CHSY1Q86X52 802 aa15.31■□□□□ 0.04
CBX3-202ENST00000396386 CEP57Q86XR8 500 aa15.31■□□□□ 0.04
CBX3-202ENST00000396386 LZTR1Q8N653 840 aa15.31■□□□□ 0.04
CBX3-202ENST00000396386 OR52K1Q8NGK4 314 aa15.31■□□□□ 0.04
CBX3-202ENST00000396386 ARNTL2Q8WYA1 636 aa15.31■□□□□ 0.04
CBX3-202ENST00000396386 OXNAD1Q96HP4 312 aaPredicted RBP15.31■□□□□ 0.04
CBX3-202ENST00000396386 AGAP3Q96P47 875 aa15.31■□□□□ 0.04
CBX3-202ENST00000396386 CASD1Q96PB1 797 aa15.31■□□□□ 0.04
CBX3-202ENST00000396386 PGLYRP2Q96PD5 576 aa15.31■□□□□ 0.04
CBX3-202ENST00000396386 FAM111AQ96PZ2 611 aa15.31■□□□□ 0.04
CBX3-202ENST00000396386 FNDC1Q4ZHG4 1894 aaPredicted RBP15.31■□□□□ 0.04
CBX3-202ENST00000396386 GREB1Q4ZG55 1949 aa15.31■□□□□ 0.04
CBX3-202ENST00000396386 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.31■□□□□ 0.04
CBX3-202ENST00000396386 ARHGAP42A6NI28 874 aa15.31■□□□□ 0.04
CBX3-202ENST00000396386 DFFAO00273 331 aa15.31■□□□□ 0.04
CBX3-202ENST00000396386 PITPNM1O00562 1244 aa15.31■□□□□ 0.04
CBX3-202ENST00000396386 HOXA2O43364 376 aa15.31■□□□□ 0.04
CBX3-202ENST00000396386 POLBP06746 335 aa15.31■□□□□ 0.04
CBX3-202ENST00000396386 DHRS4L1P0CG22 281 aa15.31■□□□□ 0.04
CBX3-202ENST00000396386 CD68P34810 354 aaPredicted RBP15.31■□□□□ 0.04
CBX3-202ENST00000396386 NRG1Q02297 640 aaPredicted RBP15.31■□□□□ 0.04
CBX3-202ENST00000396386 PRPSAP1Q14558 356 aa15.31■□□□□ 0.04
CBX3-202ENST00000396386 DDR2Q16832 855 aa15.31■□□□□ 0.04
CBX3-202ENST00000396386 SDHAF4Q5VUM1 108 aa15.31■□□□□ 0.04
CBX3-202ENST00000396386 KCTD11Q693B1 232 aa15.31■□□□□ 0.04
CBX3-202ENST00000396386 RASSF3Q86WH2 238 aa15.31■□□□□ 0.04
CBX3-202ENST00000396386 CNPY4Q8N129 248 aa15.31■□□□□ 0.04
CBX3-202ENST00000396386 GBP7Q8N8V2 638 aaPredicted RBP15.31■□□□□ 0.04
CBX3-202ENST00000396386 CCDC63Q8NA47 563 aa15.31■□□□□ 0.04
CBX3-202ENST00000396386 STKLD1Q8NE28 680 aa15.31■□□□□ 0.04
CBX3-202ENST00000396386 ZNF296Q8WUU4 475 aaPredicted RBP15.31■□□□□ 0.04
CBX3-202ENST00000396386 FCRL2Q96LA5 508 aaPredicted RBP15.31■□□□□ 0.04
CBX3-202ENST00000396386 TEKT5Q96M29 485 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms