RNA–Protein interactions for RNA: ENST00000394456.9

GTF2F1-201, Transcript of general transcription factor IIF subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2F1, Length 2,731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-201ENST00000394456 PPP1R36Q96LQ0 422 aa13.84□□□□□ -0.19
GTF2F1-201ENST00000394456 SORT1Q99523 831 aa13.84□□□□□ -0.19
GTF2F1-201ENST00000394456 TTC1Q99614 292 aa13.84□□□□□ -0.19
GTF2F1-201ENST00000394456 DDX50Q9BQ39 737 aaKnown RBP13.84□□□□□ -0.19
GTF2F1-201ENST00000394456 UBP1Q9NZI7 540 aa13.84□□□□□ -0.19
GTF2F1-201ENST00000394456 TIMM13Q9Y5L4 95 aaPredicted RBP13.84□□□□□ -0.19
GTF2F1-201ENST00000394456 M0QYT0 321 aa13.83□□□□□ -0.2
GTF2F1-201ENST00000394456 ITGA2BP08514 1039 aa13.83□□□□□ -0.2
GTF2F1-201ENST00000394456 SLC10A3P09131 477 aa13.83□□□□□ -0.2
GTF2F1-201ENST00000394456 TPH1P17752 444 aa13.83□□□□□ -0.2
GTF2F1-201ENST00000394456 PDE1BQ01064 536 aa13.83□□□□□ -0.2
GTF2F1-201ENST00000394456 PCBP1Q15365 356 aaKnown RBP eCLIP13.83□□□□□ -0.2
GTF2F1-201ENST00000394456 FAM219BQ5XKK7 198 aa13.83□□□□□ -0.2
GTF2F1-201ENST00000394456 ARHGAP17Q68EM7 881 aa13.83□□□□□ -0.2
GTF2F1-201ENST00000394456 TMEM154Q6P9G4 183 aa13.83□□□□□ -0.2
GTF2F1-201ENST00000394456 PAQR9Q6ZVX9 377 aa13.83□□□□□ -0.2
GTF2F1-201ENST00000394456 RASSF3Q86WH2 238 aa13.83□□□□□ -0.2
GTF2F1-201ENST00000394456 SH3TC2Q8TF17 1288 aa13.83□□□□□ -0.2
GTF2F1-201ENST00000394456 LRRC39Q96DD0 335 aa13.83□□□□□ -0.2
GTF2F1-201ENST00000394456 RHOBTB2Q9BYZ6 727 aa13.83□□□□□ -0.2
GTF2F1-201ENST00000394456 WWP1Q9H0M0 922 aa13.83□□□□□ -0.2
GTF2F1-201ENST00000394456 PIDD1Q9HB75 910 aa13.83□□□□□ -0.2
GTF2F1-201ENST00000394456 STOML1Q9UBI4 398 aa13.83□□□□□ -0.2
GTF2F1-201ENST00000394456 TAGLN3Q9UI15 199 aa13.83□□□□□ -0.2
GTF2F1-201ENST00000394456 GABRQQ9UN88 632 aa13.83□□□□□ -0.2
GTF2F1-201ENST00000394456 LOC100653049A0A140TA62 436 aa13.83□□□□□ -0.2
GTF2F1-201ENST00000394456 ENO4A6NNW6 628 aa13.83□□□□□ -0.2
GTF2F1-201ENST00000394456 KRT34O76011 436 aa13.83□□□□□ -0.2
GTF2F1-201ENST00000394456 CPOXP36551 454 aa13.83□□□□□ -0.2
GTF2F1-201ENST00000394456 CACNA2D1P54289 1103 aa13.83□□□□□ -0.2
GTF2F1-201ENST00000394456 BCAT1P54687 386 aa13.83□□□□□ -0.2
GTF2F1-201ENST00000394456 TRIM32Q13049 653 aa13.83□□□□□ -0.2
GTF2F1-201ENST00000394456 IRF5Q13568 498 aa13.83□□□□□ -0.2
GTF2F1-201ENST00000394456 EML3Q32P44 896 aa13.83□□□□□ -0.2
GTF2F1-201ENST00000394456 STEAP4Q687X5 459 aa13.83□□□□□ -0.2
GTF2F1-201ENST00000394456 NAPRTQ6XQN6 538 aa13.83□□□□□ -0.2
GTF2F1-201ENST00000394456 GPRIN1Q7Z2K8 1008 aa13.83□□□□□ -0.2
GTF2F1-201ENST00000394456 SCUBE1Q8IWY4 988 aa13.83□□□□□ -0.2
GTF2F1-201ENST00000394456 PHTF2Q8N3S3 785 aa13.83□□□□□ -0.2
GTF2F1-201ENST00000394456 HIPK4Q8NE63 616 aa13.83□□□□□ -0.2
GTF2F1-201ENST00000394456 CFAP61Q8NHU2 1237 aa13.83□□□□□ -0.2
GTF2F1-201ENST00000394456 STMN2Q93045 179 aa13.83□□□□□ -0.2
GTF2F1-201ENST00000394456 SCN10AQ9Y5Y9 1956 aa13.83□□□□□ -0.2
GTF2F1-201ENST00000394456 SPECC1L-ADORA2AF8WAN1 911 aa13.82□□□□□ -0.2
GTF2F1-201ENST00000394456 BAG2O95816 211 aa13.82□□□□□ -0.2
GTF2F1-201ENST00000394456 CD4P01730 458 aa13.82□□□□□ -0.2
GTF2F1-201ENST00000394456 SETSIPP0DME0 302 aa13.82□□□□□ -0.2
GTF2F1-201ENST00000394456 ARL4AP40617 200 aa13.82□□□□□ -0.2
GTF2F1-201ENST00000394456 MATKP42679 507 aa13.82□□□□□ -0.2
GTF2F1-201ENST00000394456 ITGA9Q13797 1035 aa13.82□□□□□ -0.2
GTF2F1-201ENST00000394456 LRRC36Q1X8D7 754 aa13.82□□□□□ -0.2
GTF2F1-201ENST00000394456 SMYD5Q6GMV2 418 aa13.82□□□□□ -0.2
GTF2F1-201ENST00000394456 PID1Q7Z2X4 250 aa13.82□□□□□ -0.2
GTF2F1-201ENST00000394456 NPWQ8N729 165 aa13.82□□□□□ -0.2
GTF2F1-201ENST00000394456 TRIB2Q92519 343 aa13.82□□□□□ -0.2
GTF2F1-201ENST00000394456 MTBPQ96DY7 904 aa13.82□□□□□ -0.2
GTF2F1-201ENST00000394456 FRMD8Q9BZ67 464 aaPredicted RBP13.82□□□□□ -0.2
GTF2F1-201ENST00000394456 SNX25Q9H3E2 840 aa13.82□□□□□ -0.2
GTF2F1-201ENST00000394456 CYP4F11Q9HBI6 524 aa13.82□□□□□ -0.2
GTF2F1-201ENST00000394456 MKS1Q9NXB0 559 aa13.82□□□□□ -0.2
GTF2F1-201ENST00000394456 DLGAP2Q9P1A6 1054 aa13.82□□□□□ -0.2
GTF2F1-201ENST00000394456 CORO1CQ9ULV4 474 aaPredicted RBP13.82□□□□□ -0.2
GTF2F1-201ENST00000394456 CDY2AQ9Y6F7 541 aa13.82□□□□□ -0.2
GTF2F1-201ENST00000394456 RPS6KL1Q9Y6S9 549 aa13.82□□□□□ -0.2
GTF2F1-201ENST00000394456 E7ENQ6 273 aa13.82□□□□□ -0.2
GTF2F1-201ENST00000394456 PTGESO14684 152 aa13.82□□□□□ -0.2
GTF2F1-201ENST00000394456 HNRNPCL1O60812 293 aaKnown RBP13.82□□□□□ -0.2
GTF2F1-201ENST00000394456 ALDH1A2O94788 518 aa13.82□□□□□ -0.2
GTF2F1-201ENST00000394456 PROCP04070 461 aa13.82□□□□□ -0.2
GTF2F1-201ENST00000394456 FYNP06241 537 aa13.82□□□□□ -0.2
GTF2F1-201ENST00000394456 GNAT1P11488 350 aa13.82□□□□□ -0.2
GTF2F1-201ENST00000394456 TAF6P49848 677 aa13.82□□□□□ -0.2
GTF2F1-201ENST00000394456 MAP3K7CLP57077 242 aa13.82□□□□□ -0.2
GTF2F1-201ENST00000394456 CBLBQ13191 982 aa13.82□□□□□ -0.2
GTF2F1-201ENST00000394456 PPP2R5DQ14738 602 aa13.82□□□□□ -0.2
GTF2F1-201ENST00000394456 RABGAP1LQ5R372 815 aa13.82□□□□□ -0.2
GTF2F1-201ENST00000394456 CERCAMQ5T4B2 595 aa13.82□□□□□ -0.2
GTF2F1-201ENST00000394456 GDF6Q6KF10 455 aaPredicted RBP13.82□□□□□ -0.2
GTF2F1-201ENST00000394456 RNF111Q6ZNA4 994 aa13.82□□□□□ -0.2
GTF2F1-201ENST00000394456 MARK2Q7KZI7 788 aaKnown RBP13.82□□□□□ -0.2
GTF2F1-201ENST00000394456 TMPRSS6Q8IU80 811 aa13.82□□□□□ -0.2
GTF2F1-201ENST00000394456 APPL2Q8NEU8 664 aa13.82□□□□□ -0.2
GTF2F1-201ENST00000394456 PYDC1Q8WXC3 89 aa13.82□□□□□ -0.2
GTF2F1-201ENST00000394456 CCDC124Q96CT7 223 aaKnown RBP13.82□□□□□ -0.2
GTF2F1-201ENST00000394456 ZNF560Q96MR9 790 aa13.82□□□□□ -0.2
GTF2F1-201ENST00000394456 KCNK16Q96T55 309 aa13.82□□□□□ -0.2
GTF2F1-201ENST00000394456 UNKQ9C0B0 810 aaKnown RBP13.82□□□□□ -0.2
GTF2F1-201ENST00000394456 THAP1Q9NVV9 213 aa13.82□□□□□ -0.2
GTF2F1-201ENST00000394456 Q9Y3F1 56 aa13.82□□□□□ -0.2
GTF2F1-201ENST00000394456 A0A088AWK7 358 aa13.81□□□□□ -0.2
GTF2F1-201ENST00000394456 FAM155AB1AL88 458 aaPredicted RBP13.81□□□□□ -0.2
GTF2F1-201ENST00000394456 DUSP11O75319 330 aaKnown RBP13.81□□□□□ -0.2
GTF2F1-201ENST00000394456 IGHA2P01877 340 aa13.81□□□□□ -0.2
GTF2F1-201ENST00000394456 KCNE1P15382 129 aa13.81□□□□□ -0.2
GTF2F1-201ENST00000394456 ACADSP16219 412 aa13.81□□□□□ -0.2
GTF2F1-201ENST00000394456 GCKP35557 465 aa13.81□□□□□ -0.2
GTF2F1-201ENST00000394456 EPHB1P54762 984 aa13.81□□□□□ -0.2
GTF2F1-201ENST00000394456 ITGA7Q13683 1181 aa13.81□□□□□ -0.2
GTF2F1-201ENST00000394456 RNF220Q5VTB9 566 aa13.81□□□□□ -0.2
GTF2F1-201ENST00000394456 WSCD1Q658N2 575 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms