RNA–Protein interactions for RNA: ENST00000393578.7

HMGA2-203, Transcript of high mobility group AT-hook 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA2, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-203ENST00000393578 SENP1Q9P0U3 644 aa22.76■■□□□ 1.23
HMGA2-203ENST00000393578 HSFX1Q9UBD0 423 aa22.76■■□□□ 1.23
HMGA2-203ENST00000393578 AFF4Q9UHB7 1163 aaKnown RBP22.76■■□□□ 1.23
HMGA2-203ENST00000393578 TMEM120BA0PK00 339 aa22.76■■□□□ 1.23
HMGA2-203ENST00000393578 TRIM43BA6NCK2 446 aa22.76■■□□□ 1.23
HMGA2-203ENST00000393578 KIAA0355O15063 1070 aa22.76■■□□□ 1.23
HMGA2-203ENST00000393578 GRIA1P42261 906 aa22.76■■□□□ 1.23
HMGA2-203ENST00000393578 DEFB103AP81534 67 aa22.76■■□□□ 1.23
HMGA2-203ENST00000393578 EFTUD2Q15029 972 aaKnown RBP eCLIP22.76■■□□□ 1.236e-8■□□□□ 10.7
HMGA2-203ENST00000393578 PKN2Q16513 984 aaKnown RBP22.76■■□□□ 1.23
HMGA2-203ENST00000393578 TEX44Q53QW1 395 aa22.76■■□□□ 1.23
HMGA2-203ENST00000393578 PIK3R6Q5UE93 754 aa22.76■■□□□ 1.23
HMGA2-203ENST00000393578 SLC39A11Q8N1S5 342 aa22.76■■□□□ 1.23
HMGA2-203ENST00000393578 ATP6V0D2Q8N8Y2 350 aa22.76■■□□□ 1.23
HMGA2-203ENST00000393578 DEPDC1BQ8WUY9 529 aa22.76■■□□□ 1.23
HMGA2-203ENST00000393578 ATXN2LQ8WWM7 1075 aaKnown RBP22.76■■□□□ 1.23
HMGA2-203ENST00000393578 TRIM43Q96BQ3 446 aaPredicted RBP22.76■■□□□ 1.23
HMGA2-203ENST00000393578 CFAP36Q96G28 342 aa22.76■■□□□ 1.23
HMGA2-203ENST00000393578 TMEM169Q96HH4 297 aa22.76■■□□□ 1.23
HMGA2-203ENST00000393578 BTN2A3PQ96KV6 586 aa22.76■■□□□ 1.23
HMGA2-203ENST00000393578 FNIP2Q9P278 1114 aa22.76■■□□□ 1.23
HMGA2-203ENST00000393578 CARNS1A5YM72 827 aa22.75■■□□□ 1.23
HMGA2-203ENST00000393578 F5H423 210 aaPredicted RBP22.75■■□□□ 1.23
HMGA2-203ENST00000393578 C2CD2LO14523 706 aa22.75■■□□□ 1.23
HMGA2-203ENST00000393578 TRDMT1O14717 391 aaKnown RBP22.75■■□□□ 1.23
HMGA2-203ENST00000393578 CCNCP24863 283 aa22.75■■□□□ 1.23
HMGA2-203ENST00000393578 MSH2P43246 934 aa22.75■■□□□ 1.23
HMGA2-203ENST00000393578 DSG1Q02413 1049 aa22.75■■□□□ 1.23
HMGA2-203ENST00000393578 ITPRIPL1Q6GPH6 555 aa22.75■■□□□ 1.23
HMGA2-203ENST00000393578 C14orf80Q86SX3 495 aa22.75■■□□□ 1.23
HMGA2-203ENST00000393578 ARHGAP12Q8IWW6 846 aa22.75■■□□□ 1.23
HMGA2-203ENST00000393578 CMTR2Q8IYT2 770 aaKnown RBP22.75■■□□□ 1.23
HMGA2-203ENST00000393578 RTL3Q8N8U3 475 aaKnown RBP22.75■■□□□ 1.23
HMGA2-203ENST00000393578 ZNF461Q8TAF7 563 aa22.75■■□□□ 1.23
HMGA2-203ENST00000393578 MRRFQ96E11 262 aaKnown RBP22.75■■□□□ 1.23
HMGA2-203ENST00000393578 PRDM5Q9NQX1 630 aaPredicted RBP22.75■■□□□ 1.23
HMGA2-203ENST00000393578 MYO18AQ92614 2054 aaKnown RBP22.75■■□□□ 1.23
HMGA2-203ENST00000393578 GMNCA6NCL1 334 aa22.74■■□□□ 1.23
HMGA2-203ENST00000393578 WASH4PA8MWX3 477 aa22.74■■□□□ 1.23
HMGA2-203ENST00000393578 IGLV3-27P01718 113 aa22.74■■□□□ 1.23
HMGA2-203ENST00000393578 KRT15P19012 456 aa22.74■■□□□ 1.23
HMGA2-203ENST00000393578 SEC24CP53992 1094 aa22.74■■□□□ 1.23
HMGA2-203ENST00000393578 WDR5P61964 334 aaKnown RBP22.74■■□□□ 1.23
HMGA2-203ENST00000393578 RING1Q06587 406 aa22.74■■□□□ 1.23
HMGA2-203ENST00000393578 BTG3Q14201 252 aaPredicted RBP22.74■■□□□ 1.23
HMGA2-203ENST00000393578 ACBD5Q5T8D3 534 aaPredicted RBP22.74■■□□□ 1.23
HMGA2-203ENST00000393578 FAM117BQ6P1L5 589 aa22.74■■□□□ 1.23
HMGA2-203ENST00000393578 TMCO2Q7Z6W1 182 aaPredicted RBP22.74■■□□□ 1.23
HMGA2-203ENST00000393578 MIB1Q86YT6 1006 aa22.74■■□□□ 1.23
HMGA2-203ENST00000393578 CDK5RAP1Q96SZ6 601 aaKnown RBP22.74■■□□□ 1.23
HMGA2-203ENST00000393578 GBA3Q9H227 469 aa22.74■■□□□ 1.23
HMGA2-203ENST00000393578 KCNK9Q9NPC2 374 aa22.74■■□□□ 1.23
HMGA2-203ENST00000393578 MAGED2Q9UNF1 606 aaPredicted RBP22.74■■□□□ 1.23
HMGA2-203ENST00000393578 NUP205Q92621 2012 aa22.74■■□□□ 1.23
HMGA2-203ENST00000393578 DFFAO00273 331 aa22.74■■□□□ 1.23
HMGA2-203ENST00000393578 ZBTB24O43167 697 aaPredicted RBP22.74■■□□□ 1.23
HMGA2-203ENST00000393578 ABLIM3O94929 683 aa22.74■■□□□ 1.23
HMGA2-203ENST00000393578 RAG1P15918 1043 aa22.74■■□□□ 1.23
HMGA2-203ENST00000393578 LAG3P18627 525 aa22.74■■□□□ 1.23
HMGA2-203ENST00000393578 KPNA1P52294 538 aaPredicted RBP22.74■■□□□ 1.23
HMGA2-203ENST00000393578 ZBTB17Q13105 803 aa22.74■■□□□ 1.23
HMGA2-203ENST00000393578 KBTBD12Q3ZCT8 623 aa22.74■■□□□ 1.23
HMGA2-203ENST00000393578 MS4A13Q5J8X5 152 aa22.74■■□□□ 1.23
HMGA2-203ENST00000393578 AFMIDQ63HM1 303 aa22.74■■□□□ 1.23
HMGA2-203ENST00000393578 TPGS2Q68CL5 300 aa22.74■■□□□ 1.23
HMGA2-203ENST00000393578 ZNF276Q8N554 614 aa22.74■■□□□ 1.23
HMGA2-203ENST00000393578 ATPAF2Q8N5M1 289 aa22.74■■□□□ 1.23
HMGA2-203ENST00000393578 ZSCAN18Q8TBC5 510 aaPredicted RBP22.74■■□□□ 1.23
HMGA2-203ENST00000393578 TEKT5Q96M29 485 aa22.74■■□□□ 1.23
HMGA2-203ENST00000393578 PLAC1Q9HBJ0 212 aa22.74■■□□□ 1.23
HMGA2-203ENST00000393578 PPARGC1AQ9UBK2 798 aaKnown RBP22.74■■□□□ 1.23
HMGA2-203ENST00000393578 RSPH14Q9UHP6 348 aa22.74■■□□□ 1.23
HMGA2-203ENST00000393578 TTLL3Q9Y4R7 772 aa22.74■■□□□ 1.23
HMGA2-203ENST00000393578 MAD1L1Q9Y6D9 718 aa22.74■■□□□ 1.23
HMGA2-203ENST00000393578 SDR42E2A6NKP2 422 aa22.73■■□□□ 1.23
HMGA2-203ENST00000393578 ERI2A8K979 691 aaKnown RBP22.73■■□□□ 1.23
HMGA2-203ENST00000393578 NDUFAB1O14561 156 aa22.73■■□□□ 1.23
HMGA2-203ENST00000393578 TLR5O60602 858 aa22.73■■□□□ 1.23
HMGA2-203ENST00000393578 MTA1Q13330 715 aa22.73■■□□□ 1.23
HMGA2-203ENST00000393578 NECAB2Q7Z6G3 386 aa22.73■■□□□ 1.23
HMGA2-203ENST00000393578 NLRP14Q86W24 1093 aa22.73■■□□□ 1.23
HMGA2-203ENST00000393578 LRRC49Q8IUZ0 686 aa22.73■■□□□ 1.23
HMGA2-203ENST00000393578 ZNF683Q8IZ20 524 aa22.73■■□□□ 1.23
HMGA2-203ENST00000393578 TMEM199Q8N511 208 aa22.73■■□□□ 1.23
HMGA2-203ENST00000393578 DCAKDQ8WVC6 231 aa22.73■■□□□ 1.23
HMGA2-203ENST00000393578 OVCA2Q8WZ82 227 aa22.73■■□□□ 1.23
HMGA2-203ENST00000393578 AGAP3Q96P47 875 aa22.73■■□□□ 1.23
HMGA2-203ENST00000393578 HERC2P3Q9BVR0 1158 aa22.73■■□□□ 1.23
HMGA2-203ENST00000393578 RABEP2Q9H5N1 569 aa22.73■■□□□ 1.23
HMGA2-203ENST00000393578 DONSONQ9NYP3 566 aa22.73■■□□□ 1.23
HMGA2-203ENST00000393578 FAM107AO95990 144 aa22.72■■□□□ 1.23
HMGA2-203ENST00000393578 PRKCHP24723 683 aa22.72■■□□□ 1.23
HMGA2-203ENST00000393578 CD68P34810 354 aaPredicted RBP22.72■■□□□ 1.23
HMGA2-203ENST00000393578 UNC5AQ6ZN44 842 aa22.72■■□□□ 1.23
HMGA2-203ENST00000393578 MPP5Q8N3R9 675 aa22.72■■□□□ 1.23
HMGA2-203ENST00000393578 PDZD8Q8NEN9 1154 aa22.72■■□□□ 1.23
HMGA2-203ENST00000393578 SLC44A1Q8WWI5 657 aa22.72■■□□□ 1.23
HMGA2-203ENST00000393578 CCT8L2Q96SF2 557 aa22.72■■□□□ 1.23
HMGA2-203ENST00000393578 GORASP1Q9BQQ3 440 aa22.72■■□□□ 1.23
HMGA2-203ENST00000393578 SLC39A8Q9C0K1 460 aa22.72■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms