RNA–Protein interactions for RNA: ENST00000389589.8

SHOX2-201, Transcript of short stature homeobox 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHOX2, Length 2,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-201ENST00000389589 FNIP2Q9P278 1114 aa25.84■■□□□ 1.73
SHOX2-201ENST00000389589 HS3ST4Q9Y661 456 aa25.84■■□□□ 1.73
SHOX2-201ENST00000389589 DOCK4Q8N1I0 1966 aa25.84■■□□□ 1.73
SHOX2-201ENST00000389589 LTBP2Q14767 1821 aa25.84■■□□□ 1.73
SHOX2-201ENST00000389589 CCNCP24863 283 aa25.84■■□□□ 1.73
SHOX2-201ENST00000389589 LRRC14Q15048 493 aa25.84■■□□□ 1.73
SHOX2-201ENST00000389589 CYS1Q717R9 158 aa25.84■■□□□ 1.73
SHOX2-201ENST00000389589 FBXO22Q8NEZ5 403 aa25.84■■□□□ 1.73
SHOX2-201ENST00000389589 STAMBPL1Q96FJ0 436 aa25.84■■□□□ 1.73
SHOX2-201ENST00000389589 NAT9Q9BTE0 207 aa25.84■■□□□ 1.73
SHOX2-201ENST00000389589 GBA3Q9H227 469 aa25.84■■□□□ 1.73
SHOX2-201ENST00000389589 CWH43Q9H720 699 aa25.84■■□□□ 1.73
SHOX2-201ENST00000389589 MTRRQ9UBK8 725 aa25.84■■□□□ 1.73
SHOX2-201ENST00000389589 GGA2Q9UJY4 613 aa25.84■■□□□ 1.73
SHOX2-201ENST00000389589 BACE2Q9Y5Z0 518 aa25.84■■□□□ 1.73
SHOX2-201ENST00000389589 CDY1Q9Y6F8 540 aa25.84■■□□□ 1.73
SHOX2-201ENST00000389589 E9PAM4 449 aa25.83■■□□□ 1.73
SHOX2-201ENST00000389589 F5H423 210 aaPredicted RBP25.83■■□□□ 1.73
SHOX2-201ENST00000389589 SOAT2O75908 522 aa25.83■■□□□ 1.73
SHOX2-201ENST00000389589 MOCS2O96007 188 aaPredicted RBP25.83■■□□□ 1.73
SHOX2-201ENST00000389589 TUBP50607 506 aa25.83■■□□□ 1.73
SHOX2-201ENST00000389589 TAF10Q12962 218 aa25.83■■□□□ 1.73
SHOX2-201ENST00000389589 DUSP4Q13115 394 aa25.83■■□□□ 1.73
SHOX2-201ENST00000389589 SLC8B1Q6J4K2 584 aa25.83■■□□□ 1.73
SHOX2-201ENST00000389589 PRSS55Q6UWB4 352 aaPredicted RBP25.83■■□□□ 1.73
SHOX2-201ENST00000389589 SLC26A11Q86WA9 606 aa25.83■■□□□ 1.73
SHOX2-201ENST00000389589 LRRC6Q86X45 466 aa25.83■■□□□ 1.73
SHOX2-201ENST00000389589 MPP5Q8N3R9 675 aa25.83■■□□□ 1.73
SHOX2-201ENST00000389589 MZB1Q8WU39 189 aa25.83■■□□□ 1.73
SHOX2-201ENST00000389589 CKAP2Q8WWK9 683 aa25.83■■□□□ 1.73
SHOX2-201ENST00000389589 ALKBH8Q96BT7 664 aaKnown RBP25.83■■□□□ 1.73
SHOX2-201ENST00000389589 CELF6Q96J87 481 aaKnown RBP25.83■■□□□ 1.73
SHOX2-201ENST00000389589 CRISPLD1Q9H336 500 aa25.83■■□□□ 1.73
SHOX2-201ENST00000389589 PLAC1Q9HBJ0 212 aa25.83■■□□□ 1.73
SHOX2-201ENST00000389589 TMEM39AQ9NV64 488 aa25.83■■□□□ 1.73
SHOX2-201ENST00000389589 ZNF180Q9UJW8 692 aa25.83■■□□□ 1.73
SHOX2-201ENST00000389589 ATP11BQ9Y2G3 1177 aa25.83■■□□□ 1.73
SHOX2-201ENST00000389589 SUN1O94901 812 aa25.83■■□□□ 1.72
SHOX2-201ENST00000389589 C1QAP02745 245 aa25.83■■□□□ 1.72
SHOX2-201ENST00000389589 EFEMP1Q12805 493 aa25.83■■□□□ 1.72
SHOX2-201ENST00000389589 TRIP4Q15650 581 aaPredicted RBP25.83■■□□□ 1.72
SHOX2-201ENST00000389589 MICALCLQ6ZW33 695 aa25.83■■□□□ 1.72
SHOX2-201ENST00000389589 TAX1BP1Q86VP1 789 aa25.83■■□□□ 1.72
SHOX2-201ENST00000389589 ATP6V0D2Q8N8Y2 350 aa25.83■■□□□ 1.72
SHOX2-201ENST00000389589 DEPDC1BQ8WUY9 529 aa25.83■■□□□ 1.72
SHOX2-201ENST00000389589 DPF3Q92784 378 aa25.83■■□□□ 1.72
SHOX2-201ENST00000389589 NSRP1Q9H0G5 558 aaKnown RBP25.83■■□□□ 1.72
SHOX2-201ENST00000389589 A0A1W2PPM1 405 aa25.82■■□□□ 1.72
SHOX2-201ENST00000389589 WASH4PA8MWX3 477 aa25.82■■□□□ 1.72
SHOX2-201ENST00000389589 ZBTB24O43167 697 aaPredicted RBP25.82■■□□□ 1.72
SHOX2-201ENST00000389589 AP2A1O95782 977 aa25.82■■□□□ 1.72
SHOX2-201ENST00000389589 ACBD5Q5T8D3 534 aaPredicted RBP25.82■■□□□ 1.72
SHOX2-201ENST00000389589 STEAP4Q687X5 459 aa25.82■■□□□ 1.72
SHOX2-201ENST00000389589 NUGGCQ68CJ6 796 aa25.82■■□□□ 1.72
SHOX2-201ENST00000389589 PRPF39Q86UA1 669 aaKnown RBP25.82■■□□□ 1.72
SHOX2-201ENST00000389589 LRRC49Q8IUZ0 686 aa25.82■■□□□ 1.72
SHOX2-201ENST00000389589 ARHGAP12Q8IWW6 846 aa25.82■■□□□ 1.72
SHOX2-201ENST00000389589 ATPAF2Q8N5M1 289 aa25.82■■□□□ 1.72
SHOX2-201ENST00000389589 IGSF21Q96ID5 467 aa25.82■■□□□ 1.72
SHOX2-201ENST00000389589 TEKT5Q96M29 485 aa25.82■■□□□ 1.72
SHOX2-201ENST00000389589 IL9RQ01113 521 aa25.81■■□□□ 1.72
SHOX2-201ENST00000389589 ZBTB17Q13105 803 aa25.81■■□□□ 1.72
SHOX2-201ENST00000389589 PSMD5Q16401 504 aa25.81■■□□□ 1.72
SHOX2-201ENST00000389589 ARTNQ5T4W7 220 aa25.81■■□□□ 1.72
SHOX2-201ENST00000389589 GKAP1Q5VSY0 366 aaPredicted RBP25.81■■□□□ 1.72
SHOX2-201ENST00000389589 RNF168Q8IYW5 571 aaPredicted RBP25.81■■□□□ 1.72
SHOX2-201ENST00000389589 C4orf33Q8N1A6 199 aa25.81■■□□□ 1.72
SHOX2-201ENST00000389589 RTL3Q8N8U3 475 aaKnown RBP25.81■■□□□ 1.72
SHOX2-201ENST00000389589 KIF9Q9HAQ2 790 aa25.81■■□□□ 1.72
SHOX2-201ENST00000389589 DONSONQ9NYP3 566 aa25.81■■□□□ 1.72
SHOX2-201ENST00000389589 DFFAO00273 331 aa25.81■■□□□ 1.72
SHOX2-201ENST00000389589 SPAG7O75391 227 aa25.81■■□□□ 1.72
SHOX2-201ENST00000389589 PIAS1O75925 651 aa25.81■■□□□ 1.72
SHOX2-201ENST00000389589 KRT4P19013 534 aa25.81■■□□□ 1.72
SHOX2-201ENST00000389589 LGSNQ5TDP6 509 aa25.81■■□□□ 1.72
SHOX2-201ENST00000389589 PIK3R6Q5UE93 754 aa25.81■■□□□ 1.72
SHOX2-201ENST00000389589 CTAGE3PQ8IX95 158 aa25.81■■□□□ 1.72
SHOX2-201ENST00000389589 DENND1AQ8TEH3 1009 aa25.81■■□□□ 1.72
SHOX2-201ENST00000389589 AGAP3Q96P47 875 aa25.81■■□□□ 1.72
SHOX2-201ENST00000389589 TYROBPO43914 113 aa25.8■■□□□ 1.72
SHOX2-201ENST00000389589 VIMP08670 466 aaKnown RBP25.8■■□□□ 1.72
SHOX2-201ENST00000389589 CLTBP09497 229 aa25.8■■□□□ 1.72
SHOX2-201ENST00000389589 TUFMP49411 452 aaKnown RBP25.8■■□□□ 1.72
SHOX2-201ENST00000389589 MTA1Q13330 715 aa25.8■■□□□ 1.72
SHOX2-201ENST00000389589 QPCTQ16769 361 aa25.8■■□□□ 1.72
SHOX2-201ENST00000389589 C10orf120Q5SQS8 335 aa25.8■■□□□ 1.72
SHOX2-201ENST00000389589 RASIP1Q5U651 963 aa25.8■■□□□ 1.72
SHOX2-201ENST00000389589 LRRC34Q8IZ02 419 aa25.8■■□□□ 1.72
SHOX2-201ENST00000389589 PPM1NQ8N819 430 aa25.8■■□□□ 1.72
SHOX2-201ENST00000389589 BTN2A3PQ96KV6 586 aa25.8■■□□□ 1.72
SHOX2-201ENST00000389589 MAGEB18Q96M61 343 aa25.8■■□□□ 1.72
SHOX2-201ENST00000389589 TTLL2Q9BWV7 592 aa25.8■■□□□ 1.72
SHOX2-201ENST00000389589 MARCH2Q9P0N8 246 aa25.8■■□□□ 1.72
SHOX2-201ENST00000389589 PRDM4Q9UKN5 801 aa25.8■■□□□ 1.72
SHOX2-201ENST00000389589 WDR27A2RRH5 827 aa25.79■■□□□ 1.72
SHOX2-201ENST00000389589 ARHGAP42A6NI28 874 aa25.79■■□□□ 1.72
SHOX2-201ENST00000389589 FAM159BA6NKW6 160 aa25.79■■□□□ 1.72
SHOX2-201ENST00000389589 SLC38A8A6NNN8 435 aa25.79■■□□□ 1.72
SHOX2-201ENST00000389589 PSMD3O43242 534 aa25.79■■□□□ 1.72
SHOX2-201ENST00000389589 JCHAINP01591 159 aa25.79■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms