RNA–Protein interactions for RNA: ENST00000374943.8

HLA-DQB1-201, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-201ENST00000374943 DENND1AQ8TEH3 1009 aa18.47■□□□□ 0.55
HLA-DQB1-201ENST00000374943 DYDC1Q8WWB3 177 aa18.47■□□□□ 0.55
HLA-DQB1-201ENST00000374943 FBXO32Q969P5 355 aa18.47■□□□□ 0.55
HLA-DQB1-201ENST00000374943 ALKBH8Q96BT7 664 aaKnown RBP18.47■□□□□ 0.55
HLA-DQB1-201ENST00000374943 GORASP1Q9BQQ3 440 aa18.47■□□□□ 0.55
HLA-DQB1-201ENST00000374943 CEP41Q9BYV8 373 aa18.47■□□□□ 0.55
HLA-DQB1-201ENST00000374943 FAM107BQ9H098 131 aa18.47■□□□□ 0.55
HLA-DQB1-201ENST00000374943 SIK2Q9H0K1 926 aa18.47■□□□□ 0.55
HLA-DQB1-201ENST00000374943 SDR42E2A6NKP2 422 aa18.46■□□□□ 0.55
HLA-DQB1-201ENST00000374943 TYROBPO43914 113 aa18.46■□□□□ 0.55
HLA-DQB1-201ENST00000374943 FAM155BO75949 473 aa18.46■□□□□ 0.55
HLA-DQB1-201ENST00000374943 INHBAP08476 426 aa18.46■□□□□ 0.55
HLA-DQB1-201ENST00000374943 SRGAP2BP0DMP2 458 aa18.46■□□□□ 0.55
HLA-DQB1-201ENST00000374943 RFC2P35250 354 aa18.46■□□□□ 0.55
HLA-DQB1-201ENST00000374943 IFNAR2P48551 515 aa18.46■□□□□ 0.55
HLA-DQB1-201ENST00000374943 RPL10AP62906 217 aaKnown RBP18.46■□□□□ 0.55
HLA-DQB1-201ENST00000374943 QPCTQ16769 361 aa18.46■□□□□ 0.55
HLA-DQB1-201ENST00000374943 TEX44Q53QW1 395 aa18.46■□□□□ 0.55
HLA-DQB1-201ENST00000374943 AFMIDQ63HM1 303 aa18.46■□□□□ 0.55
HLA-DQB1-201ENST00000374943 RWDD4Q6NW29 188 aaKnown RBP18.46■□□□□ 0.55
HLA-DQB1-201ENST00000374943 DEFB128Q7Z7B8 93 aa18.46■□□□□ 0.55
HLA-DQB1-201ENST00000374943 CPLX4Q7Z7G2 160 aa18.46■□□□□ 0.55
HLA-DQB1-201ENST00000374943 SLC26A11Q86WA9 606 aa18.46■□□□□ 0.55
HLA-DQB1-201ENST00000374943 KLHDC8BQ8IXV7 354 aa18.46■□□□□ 0.55
HLA-DQB1-201ENST00000374943 MPP5Q8N3R9 675 aa18.46■□□□□ 0.55
HLA-DQB1-201ENST00000374943 ZSCAN18Q8TBC5 510 aaPredicted RBP18.46■□□□□ 0.55
HLA-DQB1-201ENST00000374943 MGARPQ8TDB4 240 aa18.46■□□□□ 0.55
HLA-DQB1-201ENST00000374943 MRRFQ96E11 262 aaKnown RBP18.46■□□□□ 0.55
HLA-DQB1-201ENST00000374943 STAMBPL1Q96FJ0 436 aa18.46■□□□□ 0.55
HLA-DQB1-201ENST00000374943 NAT9Q9BTE0 207 aa18.46■□□□□ 0.55
HLA-DQB1-201ENST00000374943 CRISPLD1Q9H336 500 aa18.46■□□□□ 0.55
HLA-DQB1-201ENST00000374943 KIF9Q9HAQ2 790 aa18.46■□□□□ 0.55
HLA-DQB1-201ENST00000374943 TLR8Q9NR97 1041 aaKnown RBP18.46■□□□□ 0.55
HLA-DQB1-201ENST00000374943 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.46■□□□□ 0.55
HLA-DQB1-201ENST00000374943 MTRRQ9UBK8 725 aa18.46■□□□□ 0.55
HLA-DQB1-201ENST00000374943 BACE2Q9Y5Z0 518 aa18.46■□□□□ 0.55
HLA-DQB1-201ENST00000374943 HS3ST4Q9Y661 456 aa18.46■□□□□ 0.55
HLA-DQB1-201ENST00000374943 IKBKGQ9Y6K9 419 aa18.46■□□□□ 0.55
HLA-DQB1-201ENST00000374943 PDE4DIPQ5VU43 2346 aa18.46■□□□□ 0.55
HLA-DQB1-201ENST00000374943 A0A1W2PPM1 405 aa18.45■□□□□ 0.54
HLA-DQB1-201ENST00000374943 FAM159BA6NKW6 160 aa18.45■□□□□ 0.54
HLA-DQB1-201ENST00000374943 E9PAM4 449 aa18.45■□□□□ 0.54
HLA-DQB1-201ENST00000374943 AP2A1O95782 977 aa18.45■□□□□ 0.54
HLA-DQB1-201ENST00000374943 ZDHHC11BP0C7U3 371 aa18.45■□□□□ 0.54
HLA-DQB1-201ENST00000374943 CCNCP24863 283 aa18.45■□□□□ 0.54
HLA-DQB1-201ENST00000374943 PBX3P40426 434 aa18.45■□□□□ 0.54
HLA-DQB1-201ENST00000374943 MLLT6P55198 1093 aaPredicted RBP18.45■□□□□ 0.54
HLA-DQB1-201ENST00000374943 ARPP19P56211 112 aa18.45■□□□□ 0.54
HLA-DQB1-201ENST00000374943 TBX4P57082 545 aa18.45■□□□□ 0.54
HLA-DQB1-201ENST00000374943 ZBTB17Q13105 803 aa18.45■□□□□ 0.54
HLA-DQB1-201ENST00000374943 IKBKEQ14164 716 aa18.45■□□□□ 0.54
HLA-DQB1-201ENST00000374943 LRRC14Q15048 493 aa18.45■□□□□ 0.54
HLA-DQB1-201ENST00000374943 TRIP4Q15650 581 aaPredicted RBP18.45■□□□□ 0.54
HLA-DQB1-201ENST00000374943 MGAT5BQ3V5L5 792 aa18.45■□□□□ 0.54
HLA-DQB1-201ENST00000374943 NUGGCQ68CJ6 796 aa18.45■□□□□ 0.54
HLA-DQB1-201ENST00000374943 SLC8B1Q6J4K2 584 aa18.45■□□□□ 0.54
HLA-DQB1-201ENST00000374943 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.45■□□□□ 0.54
HLA-DQB1-201ENST00000374943 MICALCLQ6ZW33 695 aa18.45■□□□□ 0.54
HLA-DQB1-201ENST00000374943 TAS1R1Q7RTX1 841 aa18.45■□□□□ 0.54
HLA-DQB1-201ENST00000374943 PRPF39Q86UA1 669 aaKnown RBP18.45■□□□□ 0.54
HLA-DQB1-201ENST00000374943 LRRC6Q86X45 466 aa18.45■□□□□ 0.54
HLA-DQB1-201ENST00000374943 LRRC34Q8IZ02 419 aa18.45■□□□□ 0.54
HLA-DQB1-201ENST00000374943 TEKT5Q96M29 485 aa18.45■□□□□ 0.54
HLA-DQB1-201ENST00000374943 MAGEB18Q96M61 343 aa18.45■□□□□ 0.54
HLA-DQB1-201ENST00000374943 CWH43Q9H720 699 aa18.45■□□□□ 0.54
HLA-DQB1-201ENST00000374943 NUDT5Q9UKK9 219 aa18.45■□□□□ 0.54
HLA-DQB1-201ENST00000374943 MAD1L1Q9Y6D9 718 aa18.45■□□□□ 0.54
HLA-DQB1-201ENST00000374943 KIAA1671Q9BY89 1806 aa18.45■□□□□ 0.54
HLA-DQB1-201ENST00000374943 ASMTLO95671 621 aa18.44■□□□□ 0.54
HLA-DQB1-201ENST00000374943 CD68P34810 354 aaPredicted RBP18.44■□□□□ 0.54
HLA-DQB1-201ENST00000374943 ALDH7A1P49419 539 aaKnown RBP18.44■□□□□ 0.54
HLA-DQB1-201ENST00000374943 USP41Q3LFD5 358 aa18.44■□□□□ 0.54
HLA-DQB1-201ENST00000374943 ACBD5Q5T8D3 534 aaPredicted RBP18.44■□□□□ 0.54
HLA-DQB1-201ENST00000374943 GKAP1Q5VSY0 366 aaPredicted RBP18.44■□□□□ 0.54
HLA-DQB1-201ENST00000374943 KCTD11Q693B1 232 aa18.44■□□□□ 0.54
HLA-DQB1-201ENST00000374943 LRRC49Q8IUZ0 686 aa18.44■□□□□ 0.54
HLA-DQB1-201ENST00000374943 ZNF683Q8IZ20 524 aa18.44■□□□□ 0.54
HLA-DQB1-201ENST00000374943 RTL3Q8N8U3 475 aaKnown RBP18.44■□□□□ 0.54
HLA-DQB1-201ENST00000374943 DEPDC1BQ8WUY9 529 aa18.44■□□□□ 0.54
HLA-DQB1-201ENST00000374943 VWCEQ96DN2 955 aa18.44■□□□□ 0.54
HLA-DQB1-201ENST00000374943 SEPT5Q99719 369 aaPredicted RBP18.44■□□□□ 0.54
HLA-DQB1-201ENST00000374943 TTLL2Q9BWV7 592 aa18.44■□□□□ 0.54
HLA-DQB1-201ENST00000374943 NSRP1Q9H0G5 558 aaKnown RBP18.44■□□□□ 0.54
HLA-DQB1-201ENST00000374943 SLC27A5Q9Y2P5 690 aa18.44■□□□□ 0.54
HLA-DQB1-201ENST00000374943 CHD5Q8TDI0 1954 aa18.44■□□□□ 0.54
HLA-DQB1-201ENST00000374943 ZBTB24O43167 697 aaPredicted RBP18.44■□□□□ 0.54
HLA-DQB1-201ENST00000374943 CACNG3O60359 315 aa18.44■□□□□ 0.54
HLA-DQB1-201ENST00000374943 SPAG7O75391 227 aa18.44■□□□□ 0.54
HLA-DQB1-201ENST00000374943 SOAT2O75908 522 aa18.44■□□□□ 0.54
HLA-DQB1-201ENST00000374943 ALDH1A2O94788 518 aa18.44■□□□□ 0.54
HLA-DQB1-201ENST00000374943 IGLV3-27P01718 113 aa18.44■□□□□ 0.54
HLA-DQB1-201ENST00000374943 PGAM1P18669 254 aa18.44■□□□□ 0.54
HLA-DQB1-201ENST00000374943 KRT4P19013 534 aa18.44■□□□□ 0.54
HLA-DQB1-201ENST00000374943 WDR4P57081 412 aaKnown RBP18.44■□□□□ 0.54
HLA-DQB1-201ENST00000374943 IL9RQ01113 521 aa18.44■□□□□ 0.54
HLA-DQB1-201ENST00000374943 TAF10Q12962 218 aa18.44■□□□□ 0.54
HLA-DQB1-201ENST00000374943 PIK3R6Q5UE93 754 aa18.44■□□□□ 0.54
HLA-DQB1-201ENST00000374943 C4orf33Q8N1A6 199 aa18.44■□□□□ 0.54
HLA-DQB1-201ENST00000374943 ATPAF2Q8N5M1 289 aa18.44■□□□□ 0.54
HLA-DQB1-201ENST00000374943 FBXO22Q8NEZ5 403 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms