RNA–Protein interactions for RNA: ENST00000374877.7

CCDC40-203, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC40, Length 3,544 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-203ENST00000374877 MYO18AQ92614 2054 aaKnown RBP11.37□□□□□ -0.59
CCDC40-203ENST00000374877 ZBTB14O43829 449 aa11.37□□□□□ -0.59
CCDC40-203ENST00000374877 PIM1P11309 404 aaPredicted RBP11.37□□□□□ -0.59
CCDC40-203ENST00000374877 GRK2P25098 689 aa11.37□□□□□ -0.59
CCDC40-203ENST00000374877 SERPINB5P36952 375 aa11.37□□□□□ -0.59
CCDC40-203ENST00000374877 NUDT2P50583 147 aa11.37□□□□□ -0.59
CCDC40-203ENST00000374877 EFNA5P52803 228 aa11.37□□□□□ -0.59
CCDC40-203ENST00000374877 MTTPP55157 894 aa11.37□□□□□ -0.59
CCDC40-203ENST00000374877 MRPS22P82650 360 aaKnown RBP11.37□□□□□ -0.59
CCDC40-203ENST00000374877 PDK2Q15119 407 aa11.37□□□□□ -0.59
CCDC40-203ENST00000374877 NADK2Q4G0N4 442 aa11.37□□□□□ -0.59
CCDC40-203ENST00000374877 COPS5Q92905 334 aa11.37□□□□□ -0.59
CCDC40-203ENST00000374877 PRICKLE1Q96MT3 831 aaPredicted RBP11.37□□□□□ -0.59
CCDC40-203ENST00000374877 OXCT2Q9BYC2 517 aaPredicted RBP11.37□□□□□ -0.59
CCDC40-203ENST00000374877 FAM96AQ9H5X1 160 aa11.37□□□□□ -0.59
CCDC40-203ENST00000374877 MOCS1Q9NZB8 636 aa11.37□□□□□ -0.59
CCDC40-203ENST00000374877 PTTG2Q9NZH5 202 aa11.37□□□□□ -0.59
CCDC40-203ENST00000374877 CASQ2O14958 399 aaPredicted RBP11.36□□□□□ -0.59
CCDC40-203ENST00000374877 PFDN1O60925 122 aa11.36□□□□□ -0.59
CCDC40-203ENST00000374877 HSPA4LO95757 839 aa11.36□□□□□ -0.59
CCDC40-203ENST00000374877 TFAP2AP05549 437 aa11.36□□□□□ -0.59
CCDC40-203ENST00000374877 MYL4P12829 197 aa11.36□□□□□ -0.59
CCDC40-203ENST00000374877 ADCYAP1R1P41586 468 aa11.36□□□□□ -0.59
CCDC40-203ENST00000374877 MAGEA3P43357 314 aa11.36□□□□□ -0.59
CCDC40-203ENST00000374877 BOLA3Q53S33 107 aa11.36□□□□□ -0.59
CCDC40-203ENST00000374877 FSCBQ5H9T9 825 aa11.36□□□□□ -0.59
CCDC40-203ENST00000374877 OGFRL1Q5TC84 451 aaPredicted RBP11.36□□□□□ -0.59
CCDC40-203ENST00000374877 ZBTB8OSQ8IWT0 167 aa11.36□□□□□ -0.59
CCDC40-203ENST00000374877 TMEM192Q8IY95 271 aa11.36□□□□□ -0.59
CCDC40-203ENST00000374877 TNS4Q8IZW8 715 aa11.36□□□□□ -0.59
CCDC40-203ENST00000374877 UBAP1Q9NZ09 502 aa11.36□□□□□ -0.59
CCDC40-203ENST00000374877 COPG2Q9UBF2 871 aa11.36□□□□□ -0.59
CCDC40-203ENST00000374877 DCDC2Q9UHG0 476 aa11.36□□□□□ -0.59
CCDC40-203ENST00000374877 GOLGA8QA0A0J9YX86 632 aa11.36□□□□□ -0.59
CCDC40-203ENST00000374877 GOLGA8OA6NCC3 632 aa11.36□□□□□ -0.59
CCDC40-203ENST00000374877 GOLGA8NF8WBI6 632 aa11.36□□□□□ -0.59
CCDC40-203ENST00000374877 INO80B-WBP1J3KQ70 363 aa11.36□□□□□ -0.59
CCDC40-203ENST00000374877 PDLIM1O00151 329 aa11.36□□□□□ -0.59
CCDC40-203ENST00000374877 VILLO15195 856 aa11.36□□□□□ -0.59
CCDC40-203ENST00000374877 ADCY6O43306 1168 aa11.36□□□□□ -0.59
CCDC40-203ENST00000374877 ATP9BO43861 1147 aa11.36□□□□□ -0.59
CCDC40-203ENST00000374877 GAS2O43903 313 aaKnown RBP11.36□□□□□ -0.59
CCDC40-203ENST00000374877 AOC2O75106 756 aa11.36□□□□□ -0.59
CCDC40-203ENST00000374877 TMCC1O94876 653 aa11.36□□□□□ -0.59
CCDC40-203ENST00000374877 PENKP01210 267 aaPredicted RBP11.36□□□□□ -0.59
CCDC40-203ENST00000374877 ITGB3P05106 788 aa11.36□□□□□ -0.59
CCDC40-203ENST00000374877 FAM200BP0CF97 657 aa11.36□□□□□ -0.59
CCDC40-203ENST00000374877 CYP2F1P24903 491 aa11.36□□□□□ -0.59
CCDC40-203ENST00000374877 MAGEA6P43360 314 aa11.36□□□□□ -0.59
CCDC40-203ENST00000374877 KLF10Q13118 480 aa11.36□□□□□ -0.59
CCDC40-203ENST00000374877 DBN1Q16643 649 aa11.36□□□□□ -0.59
CCDC40-203ENST00000374877 CCDC14Q49A88 953 aa11.36□□□□□ -0.59
CCDC40-203ENST00000374877 RARS2Q5T160 578 aaKnown RBP11.36□□□□□ -0.59
CCDC40-203ENST00000374877 KLHDC10Q6PID8 442 aa11.36□□□□□ -0.59
CCDC40-203ENST00000374877 B3GNT6Q6ZMB0 384 aa11.36□□□□□ -0.59
CCDC40-203ENST00000374877 ACMSDQ8TDX5 336 aa11.36□□□□□ -0.59
CCDC40-203ENST00000374877 PRPF18Q99633 342 aaKnown RBP11.36□□□□□ -0.59
CCDC40-203ENST00000374877 INO80BQ9C086 356 aaPredicted RBP11.36□□□□□ -0.59
CCDC40-203ENST00000374877 COG4Q9H9E3 785 aa11.36□□□□□ -0.59
CCDC40-203ENST00000374877 SIX4Q9UIU6 781 aa11.36□□□□□ -0.59
CCDC40-203ENST00000374877 PSMD13Q9UNM6 376 aa11.36□□□□□ -0.59
CCDC40-203ENST00000374877 Q9Y3F1 56 aa11.36□□□□□ -0.59
CCDC40-203ENST00000374877 CFLARO15519 480 aa11.36□□□□□ -0.59
CCDC40-203ENST00000374877 PEX1O43933 1283 aa11.36□□□□□ -0.59
CCDC40-203ENST00000374877 DNAJA2O60884 412 aa11.36□□□□□ -0.59
CCDC40-203ENST00000374877 NFICP08651 508 aa11.36□□□□□ -0.59
CCDC40-203ENST00000374877 SRGAP2BP0DMP2 458 aa11.36□□□□□ -0.59
CCDC40-203ENST00000374877 SMPD1P17405 629 aa11.36□□□□□ -0.59
CCDC40-203ENST00000374877 GK3PQ14409 553 aa11.36□□□□□ -0.59
CCDC40-203ENST00000374877 SLC9B1Q4ZJI4 515 aa11.36□□□□□ -0.59
CCDC40-203ENST00000374877 KCNT2Q6UVM3 1135 aa11.36□□□□□ -0.59
CCDC40-203ENST00000374877 CES3Q6UWW8 571 aa11.36□□□□□ -0.59
CCDC40-203ENST00000374877 CMC1Q7Z7K0 106 aa11.36□□□□□ -0.59
CCDC40-203ENST00000374877 RNF148Q8N7C7 305 aa11.36□□□□□ -0.59
CCDC40-203ENST00000374877 ZNF781Q8N8C0 355 aa11.36□□□□□ -0.59
CCDC40-203ENST00000374877 ITFG2Q969R8 447 aa11.36□□□□□ -0.59
CCDC40-203ENST00000374877 LENG8Q96PV6 779 aaPredicted RBP11.36□□□□□ -0.59
CCDC40-203ENST00000374877 RHBDL2Q9NX52 303 aa11.36□□□□□ -0.59
CCDC40-203ENST00000374877 SSX2IPQ9Y2D8 614 aa11.36□□□□□ -0.59
CCDC40-203ENST00000374877 AP4B1Q9Y6B7 739 aa11.36□□□□□ -0.59
CCDC40-203ENST00000374877 NEMP1O14524 444 aa11.35□□□□□ -0.59
CCDC40-203ENST00000374877 B4GALT5O43286 388 aa11.35□□□□□ -0.59
CCDC40-203ENST00000374877 CSDE1O75534 798 aaKnown RBP11.35□□□□□ -0.59
CCDC40-203ENST00000374877 TRPA1O75762 1119 aa11.35□□□□□ -0.59
CCDC40-203ENST00000374877 ZNF865P0CJ78 1059 aaPredicted RBP11.35□□□□□ -0.59
CCDC40-203ENST00000374877 CPA3P15088 417 aa11.35□□□□□ -0.59
CCDC40-203ENST00000374877 CD1EP15812 388 aa11.35□□□□□ -0.59
CCDC40-203ENST00000374877 TPSB2P20231 275 aa11.35□□□□□ -0.59
CCDC40-203ENST00000374877 SDC4P31431 198 aa11.35□□□□□ -0.59
CCDC40-203ENST00000374877 TPSAB1Q15661 275 aa11.35□□□□□ -0.59
CCDC40-203ENST00000374877 EEF1DP3Q658K8 133 aa11.35□□□□□ -0.59
CCDC40-203ENST00000374877 HEATR6Q6AI08 1181 aaKnown RBP11.35□□□□□ -0.59
CCDC40-203ENST00000374877 SLC9A4Q6AI14 798 aa11.35□□□□□ -0.59
CCDC40-203ENST00000374877 PAOXQ6QHF9 649 aa11.35□□□□□ -0.59
CCDC40-203ENST00000374877 GALNT4Q8N4A0 578 aa11.35□□□□□ -0.59
CCDC40-203ENST00000374877 MARVELD2Q8N4S9 558 aa11.35□□□□□ -0.59
CCDC40-203ENST00000374877 METTL25Q8N6Q8 603 aa11.35□□□□□ -0.59
CCDC40-203ENST00000374877 C1orf127Q8N9H9 656 aa11.35□□□□□ -0.59
CCDC40-203ENST00000374877 NLRP4Q96MN2 994 aa11.35□□□□□ -0.59
CCDC40-203ENST00000374877 BCO2Q9BYV7 579 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms