RNA–Protein interactions for RNA: ENST00000372242.7

TMEM53-203, Transcript of transmembrane protein 53, humanhuman

TSL 3 BASIC

Gene TMEM53, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-203ENST00000372242 ARSEP51690 589 aa16.8■□□□□ 0.28
TMEM53-203ENST00000372242 ZNF177Q13360 481 aaPredicted RBP16.8■□□□□ 0.28
TMEM53-203ENST00000372242 LRRC38Q5VT99 294 aa16.8■□□□□ 0.28
TMEM53-203ENST00000372242 GRAMD4Q6IC98 578 aa16.8■□□□□ 0.28
TMEM53-203ENST00000372242 RFX8Q6ZV50 586 aa16.8■□□□□ 0.28
TMEM53-203ENST00000372242 CHST9Q7L1S5 443 aa16.8■□□□□ 0.28
TMEM53-203ENST00000372242 PEX26Q7Z412 305 aa16.8■□□□□ 0.28
TMEM53-203ENST00000372242 SYCE1Q8N0S2 351 aa16.8■□□□□ 0.28
TMEM53-203ENST00000372242 FIBINQ8TAL6 211 aa16.8■□□□□ 0.28
TMEM53-203ENST00000372242 MSANTD3Q96H12 275 aa16.8■□□□□ 0.28
TMEM53-203ENST00000372242 CALN1Q9BXU9 219 aa16.8■□□□□ 0.28
TMEM53-203ENST00000372242 SLC2A11Q9BYW1 496 aa16.8■□□□□ 0.28
TMEM53-203ENST00000372242 EPHX3Q9H6B9 360 aa16.8■□□□□ 0.28
TMEM53-203ENST00000372242 TBC1D17Q9HA65 648 aa16.8■□□□□ 0.28
TMEM53-203ENST00000372242 ZNF212Q9UDV6 495 aa16.8■□□□□ 0.28
TMEM53-203ENST00000372242 DNAI1Q9UI46 699 aa16.8■□□□□ 0.28
TMEM53-203ENST00000372242 TECTAO75443 2155 aa16.8■□□□□ 0.28
TMEM53-203ENST00000372242 KANSL1LA0AUZ9 987 aa16.8■□□□□ 0.28
TMEM53-203ENST00000372242 LRRD1A4D1F6 860 aa16.8■□□□□ 0.28
TMEM53-203ENST00000372242 MAN2B1O00754 1011 aa16.8■□□□□ 0.28
TMEM53-203ENST00000372242 DAPK3O43293 454 aa16.8■□□□□ 0.28
TMEM53-203ENST00000372242 RHOQP17081 205 aa16.8■□□□□ 0.28
TMEM53-203ENST00000372242 IL4RP24394 825 aa16.8■□□□□ 0.28
TMEM53-203ENST00000372242 OR1E1P30953 314 aa16.8■□□□□ 0.28
TMEM53-203ENST00000372242 HOXC13P31276 330 aa16.8■□□□□ 0.28
TMEM53-203ENST00000372242 LMAN2Q12907 356 aa16.8■□□□□ 0.28
TMEM53-203ENST00000372242 UBXN2BQ14CS0 331 aa16.8■□□□□ 0.28
TMEM53-203ENST00000372242 GEN1Q17RS7 908 aa16.8■□□□□ 0.28
TMEM53-203ENST00000372242 TMEM196Q5HYL7 178 aa16.8■□□□□ 0.28
TMEM53-203ENST00000372242 FSTL4Q6MZW2 842 aa16.8■□□□□ 0.28
TMEM53-203ENST00000372242 CXorf57Q6NSI4 855 aaKnown RBP16.8■□□□□ 0.28
TMEM53-203ENST00000372242 NLRP14Q86W24 1093 aa16.8■□□□□ 0.28
TMEM53-203ENST00000372242 CCDC117Q8IWD4 279 aaPredicted RBP16.8■□□□□ 0.28
TMEM53-203ENST00000372242 EZH1Q92800 747 aaPredicted RBP16.8■□□□□ 0.28
TMEM53-203ENST00000372242 CSPG4P5Q96PW8 444 aa16.8■□□□□ 0.28
TMEM53-203ENST00000372242 AMFRQ9UKV5 643 aa16.8■□□□□ 0.28
TMEM53-203ENST00000372242 TBC1D3BA6NDS4 549 aa16.79■□□□□ 0.28
TMEM53-203ENST00000372242 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.79■□□□□ 0.28
TMEM53-203ENST00000372242 PSTPIP1O43586 416 aa16.79■□□□□ 0.28
TMEM53-203ENST00000372242 EGFP01133 1207 aa16.79■□□□□ 0.28
TMEM53-203ENST00000372242 KRT1P04264 644 aa16.79■□□□□ 0.28
TMEM53-203ENST00000372242 KDELR1P24390 212 aa16.79■□□□□ 0.28
TMEM53-203ENST00000372242 TARSP26639 723 aaKnown RBP16.79■□□□□ 0.28
TMEM53-203ENST00000372242 ARL4AP40617 200 aa16.79■□□□□ 0.28
TMEM53-203ENST00000372242 GRSF1Q12849 480 aaKnown RBP eCLIP16.79■□□□□ 0.28
TMEM53-203ENST00000372242 DPYSL3Q14195 570 aa16.79■□□□□ 0.28
TMEM53-203ENST00000372242 C17orf53Q8N3J3 647 aaPredicted RBP16.79■□□□□ 0.28
TMEM53-203ENST00000372242 TERB1Q8NA31 727 aa16.79■□□□□ 0.28
TMEM53-203ENST00000372242 FLCNQ8NFG4 579 aa16.79■□□□□ 0.28
TMEM53-203ENST00000372242 FAM71BQ8TC56 605 aa16.79■□□□□ 0.28
TMEM53-203ENST00000372242 TSC1Q92574 1164 aa16.79■□□□□ 0.28
TMEM53-203ENST00000372242 RNF25Q96BH1 459 aaPredicted RBP16.79■□□□□ 0.28
TMEM53-203ENST00000372242 MFSD1Q9H3U5 465 aa16.79■□□□□ 0.28
TMEM53-203ENST00000372242 LTB4R2Q9NPC1 389 aa16.79■□□□□ 0.28
TMEM53-203ENST00000372242 GGA2Q9UJY4 613 aa16.79■□□□□ 0.28
TMEM53-203ENST00000372242 TBC1D30Q9Y2I9 924 aa16.79■□□□□ 0.28
TMEM53-203ENST00000372242 SLC27A6Q9Y2P4 619 aa16.79■□□□□ 0.28
TMEM53-203ENST00000372242 TMEM221A6NGB7 291 aa16.78■□□□□ 0.28
TMEM53-203ENST00000372242 PRRT4C9JH25 899 aa16.78■□□□□ 0.28
TMEM53-203ENST00000372242 H3BRJ5 948 aa16.78■□□□□ 0.28
TMEM53-203ENST00000372242 M0R296 226 aa16.78■□□□□ 0.28
TMEM53-203ENST00000372242 APODP05090 189 aa16.78■□□□□ 0.28
TMEM53-203ENST00000372242 AMPD1P23109 780 aa16.78■□□□□ 0.28
TMEM53-203ENST00000372242 MZF1P28698 734 aaPredicted RBP16.78■□□□□ 0.28
TMEM53-203ENST00000372242 CTNNA1P35221 906 aaKnown RBP16.78■□□□□ 0.28
TMEM53-203ENST00000372242 GRIA2P42262 883 aa16.78■□□□□ 0.28
TMEM53-203ENST00000372242 DNA2P51530 1060 aa16.78■□□□□ 0.28
TMEM53-203ENST00000372242 DPYSQ14117 519 aa16.78■□□□□ 0.28
TMEM53-203ENST00000372242 TMEM215Q68D42 235 aa16.78■□□□□ 0.28
TMEM53-203ENST00000372242 C1orf228Q6PIY5 440 aa16.78■□□□□ 0.28
TMEM53-203ENST00000372242 LMLNQ96KR4 655 aa16.78■□□□□ 0.28
TMEM53-203ENST00000372242 RBM12Q9NTZ6 932 aaKnown RBP16.78■□□□□ 0.28
TMEM53-203ENST00000372242 TMEM248Q9NWD8 314 aa16.78■□□□□ 0.28
TMEM53-203ENST00000372242 C3orf70A6NLC5 250 aaPredicted RBP16.77■□□□□ 0.28
TMEM53-203ENST00000372242 FAM170BA6NMN3 283 aa16.77■□□□□ 0.28
TMEM53-203ENST00000372242 PABPC1P11940 636 aaKnown RBP16.77■□□□□ 0.28
TMEM53-203ENST00000372242 ERCC2P18074 760 aa16.77■□□□□ 0.28
TMEM53-203ENST00000372242 CSKP41240 450 aa16.77■□□□□ 0.28
TMEM53-203ENST00000372242 HCAR3P49019 387 aa16.77■□□□□ 0.28
TMEM53-203ENST00000372242 PDK2Q15119 407 aa16.77■□□□□ 0.28
TMEM53-203ENST00000372242 LLGL1Q15334 1064 aa16.77■□□□□ 0.28
TMEM53-203ENST00000372242 ODF2Q5BJF6 829 aa16.77■□□□□ 0.28
TMEM53-203ENST00000372242 RNF219Q5W0B1 726 aaPredicted RBP16.77■□□□□ 0.28
TMEM53-203ENST00000372242 ANKS1BQ7Z6G8 1248 aa16.77■□□□□ 0.28
TMEM53-203ENST00000372242 MAP7D3Q8IWC1 876 aa16.77■□□□□ 0.28
TMEM53-203ENST00000372242 APCDD1Q8J025 514 aa16.77■□□□□ 0.28
TMEM53-203ENST00000372242 ZNF687Q8N1G0 1237 aa16.77■□□□□ 0.28
TMEM53-203ENST00000372242 RTL3Q8N8U3 475 aaKnown RBP16.77■□□□□ 0.28
TMEM53-203ENST00000372242 NETO2Q8NC67 525 aa16.77■□□□□ 0.28
TMEM53-203ENST00000372242 ALG3Q92685 438 aa16.77■□□□□ 0.28
TMEM53-203ENST00000372242 ALS2CR12Q96Q35 445 aa16.77■□□□□ 0.28
TMEM53-203ENST00000372242 CATSPERBQ9H7T0 1116 aa16.77■□□□□ 0.28
TMEM53-203ENST00000372242 ETNK2Q9NVF9 386 aa16.77■□□□□ 0.28
TMEM53-203ENST00000372242 DDX56Q9NY93 547 aaKnown RBP16.77■□□□□ 0.28
TMEM53-203ENST00000372242 KIAA1522Q9P206 1035 aaPredicted RBP16.77■□□□□ 0.28
TMEM53-203ENST00000372242 INTS6Q9UL03 887 aaKnown RBP16.77■□□□□ 0.28
TMEM53-203ENST00000372242 MRPS17Q9Y2R5 130 aaKnown RBP16.77■□□□□ 0.28
TMEM53-203ENST00000372242 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.77■□□□□ 0.28
TMEM53-203ENST00000372242 MFHAS1Q9Y4C4 1052 aa16.77■□□□□ 0.28
TMEM53-203ENST00000372242 PCDHA3Q9Y5H8 950 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms