RNA–Protein interactions for RNA: ENST00000366216.6

CSNK1E-202, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 1,005 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-202ENST00000366216 RFC1P35251 1148 aaPredicted RBP11.67□□□□□ -0.54
CSNK1E-202ENST00000366216 PLA2G4AP47712 749 aa11.67□□□□□ -0.54
CSNK1E-202ENST00000366216 MARCKSL1P49006 195 aa11.67□□□□□ -0.54
CSNK1E-202ENST00000366216 OGDHQ02218 1023 aa11.67□□□□□ -0.54
CSNK1E-202ENST00000366216 YWHAHQ04917 246 aaPredicted RBP11.67□□□□□ -0.54
CSNK1E-202ENST00000366216 LONRF2Q1L5Z9 754 aa11.67□□□□□ -0.54
CSNK1E-202ENST00000366216 PMF1Q6P1K2 205 aa11.67□□□□□ -0.54
CSNK1E-202ENST00000366216 CC2D1AQ6P1N0 951 aaPredicted RBP11.67□□□□□ -0.54
CSNK1E-202ENST00000366216 SLC23A3Q6PIS1 610 aa11.67□□□□□ -0.54
CSNK1E-202ENST00000366216 LPCAT2Q7L5N7 544 aa11.67□□□□□ -0.54
CSNK1E-202ENST00000366216 ARCQ7LC44 396 aa11.67□□□□□ -0.54
CSNK1E-202ENST00000366216 ITIH5Q86UX2 942 aa11.67□□□□□ -0.54
CSNK1E-202ENST00000366216 RASSF3Q86WH2 238 aa11.67□□□□□ -0.54
CSNK1E-202ENST00000366216 CPNE8Q86YQ8 564 aa11.67□□□□□ -0.54
CSNK1E-202ENST00000366216 SYT12Q8IV01 421 aa11.67□□□□□ -0.54
CSNK1E-202ENST00000366216 KATNAL2Q8IYT4 538 aa11.67□□□□□ -0.54
CSNK1E-202ENST00000366216 HDDC3Q8N4P3 179 aa11.67□□□□□ -0.54
CSNK1E-202ENST00000366216 SLC2A14Q8TDB8 520 aa11.67□□□□□ -0.54
CSNK1E-202ENST00000366216 LPIN3Q9BQK8 851 aa11.67□□□□□ -0.54
CSNK1E-202ENST00000366216 SYT15Q9BQS2 421 aa11.67□□□□□ -0.54
CSNK1E-202ENST00000366216 RHOXF2Q9BQY4 288 aa11.67□□□□□ -0.54
CSNK1E-202ENST00000366216 ACBD6Q9BR61 282 aa11.67□□□□□ -0.54
CSNK1E-202ENST00000366216 DUSP16Q9BY84 665 aa11.67□□□□□ -0.54
CSNK1E-202ENST00000366216 OXCT2Q9BYC2 517 aaPredicted RBP11.67□□□□□ -0.54
CSNK1E-202ENST00000366216 ST7Q9NRC1 585 aa11.67□□□□□ -0.54
CSNK1E-202ENST00000366216 METTL5Q9NRN9 209 aaKnown RBP11.67□□□□□ -0.54
CSNK1E-202ENST00000366216 TMEM74BQ9NUR3 256 aa11.67□□□□□ -0.54
CSNK1E-202ENST00000366216 MBD1Q9UIS9 605 aaPredicted RBP11.67□□□□□ -0.54
CSNK1E-202ENST00000366216 RAXQ9Y2V3 346 aa11.67□□□□□ -0.54
CSNK1E-202ENST00000366216 ATMQ13315 3056 aa11.67□□□□□ -0.54
CSNK1E-202ENST00000366216 PTPRQQ9UMZ3 2332 aa11.66□□□□□ -0.54
CSNK1E-202ENST00000366216 GOLGA6L10A0A0M3HER8 536 aa11.66□□□□□ -0.54
CSNK1E-202ENST00000366216 CCDC151A5D8V7 595 aa11.66□□□□□ -0.54
CSNK1E-202ENST00000366216 KRIT1O00522 736 aa11.66□□□□□ -0.54
CSNK1E-202ENST00000366216 PYGMP11217 842 aa11.66□□□□□ -0.54
CSNK1E-202ENST00000366216 ATF6P18850 670 aa11.66□□□□□ -0.54
CSNK1E-202ENST00000366216 PSMA2P25787 234 aa11.66□□□□□ -0.54
CSNK1E-202ENST00000366216 ADORA2BP29275 332 aa11.66□□□□□ -0.54
CSNK1E-202ENST00000366216 SLC8A3P57103 927 aa11.66□□□□□ -0.54
CSNK1E-202ENST00000366216 RNASE9P60153 205 aaKnown RBP11.66□□□□□ -0.54
CSNK1E-202ENST00000366216 SLC6A3Q01959 620 aa11.66□□□□□ -0.54
CSNK1E-202ENST00000366216 GPR17Q13304 367 aa11.66□□□□□ -0.54
CSNK1E-202ENST00000366216 ZNF211Q13398 564 aaPredicted RBP11.66□□□□□ -0.54
CSNK1E-202ENST00000366216 HNRNPDQ14103 355 aaKnown RBP11.66□□□□□ -0.54
CSNK1E-202ENST00000366216 FAM102AQ5T9C2 384 aaPredicted RBP11.66□□□□□ -0.54
CSNK1E-202ENST00000366216 OR6B2Q6IFH4 312 aa11.66□□□□□ -0.54
CSNK1E-202ENST00000366216 FBXO38Q6PIJ6 1188 aa11.66□□□□□ -0.54
CSNK1E-202ENST00000366216 CCNI2Q6ZMN8 369 aaPredicted RBP11.66□□□□□ -0.54
CSNK1E-202ENST00000366216 FAM183BPQ6ZVS7 135 aa11.66□□□□□ -0.54
CSNK1E-202ENST00000366216 PAQR9Q6ZVX9 377 aa11.66□□□□□ -0.54
CSNK1E-202ENST00000366216 POLNQ7Z5Q5 900 aa11.66□□□□□ -0.54
CSNK1E-202ENST00000366216 SLC13A5Q86YT5 568 aaPredicted RBP11.66□□□□□ -0.54
CSNK1E-202ENST00000366216 CMTM8Q8IZV2 173 aa11.66□□□□□ -0.54
CSNK1E-202ENST00000366216 FUKQ8N0W3 1084 aa11.66□□□□□ -0.54
CSNK1E-202ENST00000366216 FRMD1Q8N878 549 aa11.66□□□□□ -0.54
CSNK1E-202ENST00000366216 EXD1Q8NHP7 514 aa11.66□□□□□ -0.54
CSNK1E-202ENST00000366216 JOSD2Q8TAC2 188 aa11.66□□□□□ -0.54
CSNK1E-202ENST00000366216 MDM1Q8TC05 714 aa11.66□□□□□ -0.54
CSNK1E-202ENST00000366216 MAIP1Q8WWC4 291 aa11.66□□□□□ -0.54
CSNK1E-202ENST00000366216 KCTD13Q8WZ19 329 aa11.66□□□□□ -0.54
CSNK1E-202ENST00000366216 GCNAQ96QF7 691 aa11.66□□□□□ -0.54
CSNK1E-202ENST00000366216 PNKPQ96T60 521 aa11.66□□□□□ -0.54
CSNK1E-202ENST00000366216 NCAPGQ9BPX3 1015 aa11.66□□□□□ -0.54
CSNK1E-202ENST00000366216 LRRC1Q9BTT6 524 aa11.66□□□□□ -0.54
CSNK1E-202ENST00000366216 UBXN6Q9BZV1 441 aa11.66□□□□□ -0.54
CSNK1E-202ENST00000366216 FSCN3Q9NQT6 498 aa11.66□□□□□ -0.54
CSNK1E-202ENST00000366216 COL6A6A6NMZ7 2263 aa11.66□□□□□ -0.54
CSNK1E-202ENST00000366216 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.65□□□□□ -0.54
CSNK1E-202ENST00000366216 C2CD4BA6NLJ0 364 aa11.65□□□□□ -0.54
CSNK1E-202ENST00000366216 F8VP50 259 aa11.65□□□□□ -0.54
CSNK1E-202ENST00000366216 TULP2O00295 520 aa11.65□□□□□ -0.54
CSNK1E-202ENST00000366216 OPHN1O60890 802 aa11.65□□□□□ -0.54
CSNK1E-202ENST00000366216 ATP2C2O75185 946 aa11.65□□□□□ -0.54
CSNK1E-202ENST00000366216 PRB1P04280 392 aa11.65□□□□□ -0.54
CSNK1E-202ENST00000366216 CFIP05156 583 aa11.65□□□□□ -0.54
CSNK1E-202ENST00000366216 ACAT1P24752 427 aaKnown RBP11.65□□□□□ -0.54
CSNK1E-202ENST00000366216 CDC25CP30307 473 aa11.65□□□□□ -0.54
CSNK1E-202ENST00000366216 GJA4P35212 333 aa11.65□□□□□ -0.54
CSNK1E-202ENST00000366216 RGS7P49802 495 aa11.65□□□□□ -0.54
CSNK1E-202ENST00000366216 CLCN6P51797 869 aa11.65□□□□□ -0.54
CSNK1E-202ENST00000366216 ZNF143P52747 638 aaPredicted RBP11.65□□□□□ -0.54
CSNK1E-202ENST00000366216 ATXN3P54252 364 aaPredicted RBP11.65□□□□□ -0.54
CSNK1E-202ENST00000366216 TAS2R40P59535 323 aa11.65□□□□□ -0.54
CSNK1E-202ENST00000366216 HADHQ16836 314 aaKnown RBP11.65□□□□□ -0.54
CSNK1E-202ENST00000366216 MDH1BQ5I0G3 518 aa11.65□□□□□ -0.54
CSNK1E-202ENST00000366216 INTS6LQ5JSJ4 861 aaKnown RBP11.65□□□□□ -0.54
CSNK1E-202ENST00000366216 ANO7Q6IWH7 933 aa11.65□□□□□ -0.54
CSNK1E-202ENST00000366216 C8orf74Q6P047 294 aa11.65□□□□□ -0.54
CSNK1E-202ENST00000366216 FAM171BQ6P995 826 aa11.65□□□□□ -0.54
CSNK1E-202ENST00000366216 OLFML1Q6UWY5 402 aa11.65□□□□□ -0.54
CSNK1E-202ENST00000366216 ARMCX6Q7L4S7 300 aa11.65□□□□□ -0.54
CSNK1E-202ENST00000366216 MTERF4Q7Z6M4 381 aaKnown RBP11.65□□□□□ -0.54
CSNK1E-202ENST00000366216 TMEFF1Q8IYR6 380 aa11.65□□□□□ -0.54
CSNK1E-202ENST00000366216 RCOR2Q8IZ40 523 aa11.65□□□□□ -0.54
CSNK1E-202ENST00000366216 THEM5Q8N1Q8 247 aa11.65□□□□□ -0.54
CSNK1E-202ENST00000366216 STKLD1Q8NE28 680 aa11.65□□□□□ -0.54
CSNK1E-202ENST00000366216 MDGA1Q8NFP4 955 aa11.65□□□□□ -0.54
CSNK1E-202ENST00000366216 OR10T2Q8NGX3 314 aa11.65□□□□□ -0.54
CSNK1E-202ENST00000366216 MYCBPAPQ8TBZ2 947 aa11.65□□□□□ -0.54
CSNK1E-202ENST00000366216 ADAMTS14Q8WXS8 1223 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms