RNA–Protein interactions for RNA: ENST00000356316.7

CAPN3-204, Transcript of calpain 3, humanhuman

TSL 5 BASIC

Gene CAPN3, Length 1,291 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-204ENST00000356316 KCNU1A8MYU2 1149 aa11.02□□□□□ -0.65
CAPN3-204ENST00000356316 FLRT2O43155 660 aa11.02□□□□□ -0.65
CAPN3-204ENST00000356316 PAPSS1O43252 624 aaPredicted RBP11.02□□□□□ -0.65
CAPN3-204ENST00000356316 SIN3BO75182 1162 aa11.02□□□□□ -0.65
CAPN3-204ENST00000356316 SLC9A1P19634 815 aa11.02□□□□□ -0.65
CAPN3-204ENST00000356316 TACR2P21452 398 aa11.02□□□□□ -0.65
CAPN3-204ENST00000356316 CCR1P32246 355 aa11.02□□□□□ -0.65
CAPN3-204ENST00000356316 SLC8A1P32418 973 aa11.02□□□□□ -0.65
CAPN3-204ENST00000356316 KRT9P35527 623 aa11.02□□□□□ -0.65
CAPN3-204ENST00000356316 MTIF2P46199 727 aaKnown RBP11.02□□□□□ -0.65
CAPN3-204ENST00000356316 OXCT1P55809 520 aa11.02□□□□□ -0.65
CAPN3-204ENST00000356316 C21orf59P57076 290 aa11.02□□□□□ -0.65
CAPN3-204ENST00000356316 MTA1Q13330 715 aa11.02□□□□□ -0.65
CAPN3-204ENST00000356316 SLC12A1Q13621 1099 aa11.02□□□□□ -0.65
CAPN3-204ENST00000356316 EXOC3L4Q17RC7 722 aa11.02□□□□□ -0.65
CAPN3-204ENST00000356316 HNRNPA1L2Q32P51 320 aaKnown RBP11.02□□□□□ -0.65
CAPN3-204ENST00000356316 FSCBQ5H9T9 825 aa11.02□□□□□ -0.65
CAPN3-204ENST00000356316 PITRM1Q5JRX3 1037 aa11.02□□□□□ -0.65
CAPN3-204ENST00000356316 RABGAP1LQ5R372 815 aa11.02□□□□□ -0.65
CAPN3-204ENST00000356316 TTC39BQ5VTQ0 682 aaPredicted RBP11.02□□□□□ -0.65
CAPN3-204ENST00000356316 RAP1GAP2Q684P5 730 aa11.02□□□□□ -0.65
CAPN3-204ENST00000356316 TRIM65Q6PJ69 517 aa11.02□□□□□ -0.65
CAPN3-204ENST00000356316 RAB44Q7Z6P3 723 aaPredicted RBP11.02□□□□□ -0.65
CAPN3-204ENST00000356316 MMAAQ8IVH4 418 aaKnown RBP11.02□□□□□ -0.65
CAPN3-204ENST00000356316 PNPLA1Q8N8W4 532 aa11.02□□□□□ -0.65
CAPN3-204ENST00000356316 ZCCHC14Q8WYQ9 949 aaKnown RBP11.02□□□□□ -0.65
CAPN3-204ENST00000356316 GATA6Q92908 595 aa11.02□□□□□ -0.65
CAPN3-204ENST00000356316 PPP1R13BQ96KQ4 1090 aa11.02□□□□□ -0.65
CAPN3-204ENST00000356316 PRICKLE1Q96MT3 831 aaPredicted RBP11.02□□□□□ -0.65
CAPN3-204ENST00000356316 PABPC3Q9H361 631 aaKnown RBP11.02□□□□□ -0.65
CAPN3-204ENST00000356316 MTG2Q9H4K7 406 aa11.02□□□□□ -0.65
CAPN3-204ENST00000356316 SYNCQ9H7C4 482 aa11.02□□□□□ -0.65
CAPN3-204ENST00000356316 IL21RQ9HBE5 538 aa11.02□□□□□ -0.65
CAPN3-204ENST00000356316 TM9SF3Q9HD45 589 aa11.02□□□□□ -0.65
CAPN3-204ENST00000356316 OSGEPQ9NPF4 335 aa11.02□□□□□ -0.65
CAPN3-204ENST00000356316 KIAA1468Q9P260 1216 aa11.02□□□□□ -0.65
CAPN3-204ENST00000356316 PCOLCE2Q9UKZ9 415 aa11.02□□□□□ -0.65
CAPN3-204ENST00000356316 ANKRD6Q9Y2G4 727 aa11.02□□□□□ -0.65
CAPN3-204ENST00000356316 SNX11Q9Y5W9 270 aa11.02□□□□□ -0.65
CAPN3-204ENST00000356316 SYNJ2BP-COX16A0A087WUM0 186 aa11.01□□□□□ -0.65
CAPN3-204ENST00000356316 EDDM13A0A1B0GTR0 161 aa11.01□□□□□ -0.65
CAPN3-204ENST00000356316 FAM221BA6H8Z2 402 aa11.01□□□□□ -0.65
CAPN3-204ENST00000356316 TTC34A8MYJ7 566 aa11.01□□□□□ -0.65
CAPN3-204ENST00000356316 DFNA5O60443 496 aa11.01□□□□□ -0.65
CAPN3-204ENST00000356316 RNASEH2AO75792 299 aaKnown RBP11.01□□□□□ -0.65
CAPN3-204ENST00000356316 GLI1P08151 1106 aa11.01□□□□□ -0.65
CAPN3-204ENST00000356316 FTH1P19P0C7X4 201 aa11.01□□□□□ -0.65
CAPN3-204ENST00000356316 GRIA4P48058 902 aa11.01□□□□□ -0.65
CAPN3-204ENST00000356316 UBE2HP62256 183 aa11.01□□□□□ -0.65
CAPN3-204ENST00000356316 SULT2A1Q06520 285 aa11.01□□□□□ -0.65
CAPN3-204ENST00000356316 PDCLQ13371 301 aa11.01□□□□□ -0.65
CAPN3-204ENST00000356316 ARID5BQ14865 1188 aa11.01□□□□□ -0.65
CAPN3-204ENST00000356316 CST6Q15828 149 aa11.01□□□□□ -0.65
CAPN3-204ENST00000356316 KIF19Q2TAC6 998 aa11.01□□□□□ -0.65
CAPN3-204ENST00000356316 INAVAQ3KP66 663 aa11.01□□□□□ -0.65
CAPN3-204ENST00000356316 C9orf64Q5T6V5 341 aa11.01□□□□□ -0.65
CAPN3-204ENST00000356316 KIAA0895LQ68EN5 471 aa11.01□□□□□ -0.65
CAPN3-204ENST00000356316 GJB7Q6PEY0 223 aa11.01□□□□□ -0.65
CAPN3-204ENST00000356316 MMS22LQ6ZRQ5 1243 aa11.01□□□□□ -0.65
CAPN3-204ENST00000356316 SND1Q7KZF4 910 aaKnown RBP eCLIP11.01□□□□□ -0.65
CAPN3-204ENST00000356316 GLRX5Q86SX6 157 aa11.01□□□□□ -0.65
CAPN3-204ENST00000356316 FAM114A1Q8IWE2 563 aa11.01□□□□□ -0.65
CAPN3-204ENST00000356316 MLKLQ8NB16 471 aa11.01□□□□□ -0.65
CAPN3-204ENST00000356316 C1orf216Q8TAB5 229 aa11.01□□□□□ -0.65
CAPN3-204ENST00000356316 ADAMTS14Q8WXS8 1223 aa11.01□□□□□ -0.65
CAPN3-204ENST00000356316 LMLNQ96KR4 655 aa11.01□□□□□ -0.65
CAPN3-204ENST00000356316 RPL10LQ96L21 214 aaKnown RBP11.01□□□□□ -0.65
CAPN3-204ENST00000356316 MRGPRX3Q96LB0 322 aa11.01□□□□□ -0.65
CAPN3-204ENST00000356316 ACE2Q9BYF1 805 aaPredicted RBP11.01□□□□□ -0.65
CAPN3-204ENST00000356316 PDCL3Q9H2J4 239 aa11.01□□□□□ -0.65
CAPN3-204ENST00000356316 DDIT4Q9NX09 232 aa11.01□□□□□ -0.65
CAPN3-204ENST00000356316 COX16Q9P0S2 106 aa11.01□□□□□ -0.65
CAPN3-204ENST00000356316 INTS6Q9UL03 887 aaKnown RBP11.01□□□□□ -0.65
CAPN3-204ENST00000356316 FZD4Q9ULV1 537 aa11.01□□□□□ -0.65
CAPN3-204ENST00000356316 CEP295Q9C0D2 2601 aa11.01□□□□□ -0.65
CAPN3-204ENST00000356316 ZZEF1O43149 2961 aa11.01□□□□□ -0.65
CAPN3-204ENST00000356316 A0A1W2PP55 124 aa11□□□□□ -0.65
CAPN3-204ENST00000356316 GTPBP10A4D1E9 387 aaKnown RBP11□□□□□ -0.65
CAPN3-204ENST00000356316 GOLGA8CPA6NN73 597 aa11□□□□□ -0.65
CAPN3-204ENST00000356316 KCNK3O14649 394 aa11□□□□□ -0.65
CAPN3-204ENST00000356316 MID1O15344 667 aa11□□□□□ -0.65
CAPN3-204ENST00000356316 HSF2BPO75031 334 aa11□□□□□ -0.65
CAPN3-204ENST00000356316 ADH1BP00325 375 aa11□□□□□ -0.65
CAPN3-204ENST00000356316 IL1BP01584 269 aa11□□□□□ -0.65
CAPN3-204ENST00000356316 GOT1P17174 413 aa11□□□□□ -0.65
CAPN3-204ENST00000356316 C5AR1P21730 350 aa11□□□□□ -0.65
CAPN3-204ENST00000356316 CTSOP43234 321 aaPredicted RBP11□□□□□ -0.65
CAPN3-204ENST00000356316 GALCP54803 685 aa11□□□□□ -0.65
CAPN3-204ENST00000356316 BPIFB4P59827 614 aa11□□□□□ -0.65
CAPN3-204ENST00000356316 RACK1P63244 317 aaKnown RBP11□□□□□ -0.65
CAPN3-204ENST00000356316 NME3Q13232 169 aa11□□□□□ -0.65
CAPN3-204ENST00000356316 TAF5Q15542 800 aa11□□□□□ -0.65
CAPN3-204ENST00000356316 ACCSLQ4AC99 568 aa11□□□□□ -0.65
CAPN3-204ENST00000356316 OR6B2Q6IFH4 312 aa11□□□□□ -0.65
CAPN3-204ENST00000356316 C11orf57Q6ZUT1 292 aaPredicted RBP11□□□□□ -0.65
CAPN3-204ENST00000356316 DSG4Q86SJ6 1040 aa11□□□□□ -0.65
CAPN3-204ENST00000356316 PASD1Q8IV76 773 aa11□□□□□ -0.65
CAPN3-204ENST00000356316 APCDD1Q8J025 514 aa11□□□□□ -0.65
CAPN3-204ENST00000356316 DEFB106AQ8N104 65 aa11□□□□□ -0.65
CAPN3-204ENST00000356316 CCAR2Q8N163 923 aaKnown RBP11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms