RNA–Protein interactions for RNA: ENST00000346495.6

TSPAN3-202, Transcript of tetraspanin 3, humanhuman

TSL 2 BASIC

Gene TSPAN3, Length 1,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-202ENST00000346495 ARHGAP12Q8IWW6 846 aa22.04■■□□□ 1.12
TSPAN3-202ENST00000346495 MRPL43Q8N983 215 aaKnown RBP22.04■■□□□ 1.12
TSPAN3-202ENST00000346495 DPF3Q92784 378 aa22.04■■□□□ 1.12
TSPAN3-202ENST00000346495 TSGA13Q96PP4 275 aa22.04■■□□□ 1.12
TSPAN3-202ENST00000346495 TLR9Q9NR96 1032 aa22.04■■□□□ 1.12
TSPAN3-202ENST00000346495 MPP6Q9NZW5 540 aa22.04■■□□□ 1.12
TSPAN3-202ENST00000346495 NUP205Q92621 2012 aa22.03■■□□□ 1.12
TSPAN3-202ENST00000346495 C2orf71A6NGG8 1288 aa22.03■■□□□ 1.12
TSPAN3-202ENST00000346495 E7ESA3 106 aa22.03■■□□□ 1.12
TSPAN3-202ENST00000346495 C5orf67F2Z3F1 127 aa22.03■■□□□ 1.12
TSPAN3-202ENST00000346495 POLR3GO15318 223 aaPredicted RBP22.03■■□□□ 1.12
TSPAN3-202ENST00000346495 OAS1P00973 400 aaKnown RBP22.03■■□□□ 1.12
TSPAN3-202ENST00000346495 F11P03951 625 aa22.03■■□□□ 1.12
TSPAN3-202ENST00000346495 SHBGP04278 402 aa22.03■■□□□ 1.12
TSPAN3-202ENST00000346495 KCNQ1P51787 676 aa22.03■■□□□ 1.12
TSPAN3-202ENST00000346495 GAD2Q05329 585 aa22.03■■□□□ 1.12
TSPAN3-202ENST00000346495 CBLBQ13191 982 aa22.03■■□□□ 1.12
TSPAN3-202ENST00000346495 PARP6Q2NL67 630 aa22.03■■□□□ 1.12
TSPAN3-202ENST00000346495 FNBP1LQ5T0N5 605 aa22.03■■□□□ 1.12
TSPAN3-202ENST00000346495 UBAP2Q5T6F2 1119 aaKnown RBP22.03■■□□□ 1.12
TSPAN3-202ENST00000346495 PLPP4Q5VZY2 271 aa22.03■■□□□ 1.12
TSPAN3-202ENST00000346495 AFMIDQ63HM1 303 aa22.03■■□□□ 1.12
TSPAN3-202ENST00000346495 FBXL22Q6P050 247 aa22.03■■□□□ 1.12
TSPAN3-202ENST00000346495 CHSY1Q86X52 802 aa22.03■■□□□ 1.12
TSPAN3-202ENST00000346495 LRRC49Q8IUZ0 686 aa22.03■■□□□ 1.12
TSPAN3-202ENST00000346495 ZNF567Q8N184 647 aa22.03■■□□□ 1.12
TSPAN3-202ENST00000346495 KREMEN2Q8NCW0 462 aa22.03■■□□□ 1.12
TSPAN3-202ENST00000346495 MCUQ8NE86 351 aa22.03■■□□□ 1.12
TSPAN3-202ENST00000346495 ARL8AQ96BM9 186 aa22.03■■□□□ 1.12
TSPAN3-202ENST00000346495 C9orf72Q96LT7 481 aa22.03■■□□□ 1.12
TSPAN3-202ENST00000346495 VAT1Q99536 393 aa22.03■■□□□ 1.12
TSPAN3-202ENST00000346495 TMEM109Q9BVC6 243 aa22.03■■□□□ 1.12
TSPAN3-202ENST00000346495 ZNF334Q9HCZ1 680 aaPredicted RBP22.03■■□□□ 1.12
TSPAN3-202ENST00000346495 TMEM248Q9NWD8 314 aa22.03■■□□□ 1.12
TSPAN3-202ENST00000346495 OBSL1O75147 1896 aa22.03■■□□□ 1.12
TSPAN3-202ENST00000346495 DRGXA6NNA5 263 aa22.02■■□□□ 1.12
TSPAN3-202ENST00000346495 E7EVH7 732 aa22.02■■□□□ 1.12
TSPAN3-202ENST00000346495 DFFAO00273 331 aa22.02■■□□□ 1.12
TSPAN3-202ENST00000346495 ACSL4O60488 711 aa22.02■■□□□ 1.12
TSPAN3-202ENST00000346495 LPXNO60711 386 aa22.02■■□□□ 1.12
TSPAN3-202ENST00000346495 GLUD1P00367 558 aa22.02■■□□□ 1.12
TSPAN3-202ENST00000346495 RB1P06400 928 aa22.02■■□□□ 1.12
TSPAN3-202ENST00000346495 APRTP07741 180 aa22.02■■□□□ 1.12
TSPAN3-202ENST00000346495 ABHD2P08910 425 aa22.02■■□□□ 1.12
TSPAN3-202ENST00000346495 CCNCP24863 283 aa22.02■■□□□ 1.12
TSPAN3-202ENST00000346495 PTPN3P26045 913 aa22.02■■□□□ 1.12
TSPAN3-202ENST00000346495 SLC11A2P49281 568 aa22.02■■□□□ 1.12
TSPAN3-202ENST00000346495 KRT71Q3SY84 523 aa22.02■■□□□ 1.12
TSPAN3-202ENST00000346495 ZBED8Q8IZ13 594 aa22.02■■□□□ 1.12
TSPAN3-202ENST00000346495 ATPAF2Q8N5M1 289 aa22.02■■□□□ 1.12
TSPAN3-202ENST00000346495 UHMK1Q8TAS1 419 aaKnown RBP22.02■■□□□ 1.12
TSPAN3-202ENST00000346495 AZIN2Q96A70 460 aa22.02■■□□□ 1.12
TSPAN3-202ENST00000346495 C17orf80Q9BSJ5 609 aa22.02■■□□□ 1.12
TSPAN3-202ENST00000346495 SLC39A8Q9C0K1 460 aa22.02■■□□□ 1.12
TSPAN3-202ENST00000346495 VPS18Q9P253 973 aa22.02■■□□□ 1.12
TSPAN3-202ENST00000346495 KLHL8Q9P2G9 620 aaPredicted RBP22.02■■□□□ 1.12
TSPAN3-202ENST00000346495 IGSF9Q9P2J2 1179 aa22.02■■□□□ 1.12
TSPAN3-202ENST00000346495 TRHDEQ9UKU6 1024 aa22.02■■□□□ 1.12
TSPAN3-202ENST00000346495 SHROOM3Q8TF72 1996 aa22.02■■□□□ 1.12
TSPAN3-202ENST00000346495 KCNK1O00180 336 aa22.02■■□□□ 1.11
TSPAN3-202ENST00000346495 C8AP07357 584 aa22.02■■□□□ 1.11
TSPAN3-202ENST00000346495 TACR2P21452 398 aa22.02■■□□□ 1.11
TSPAN3-202ENST00000346495 NDST2P52849 883 aa22.02■■□□□ 1.11
TSPAN3-202ENST00000346495 TTMPQ5BVD1 217 aa22.02■■□□□ 1.11
TSPAN3-202ENST00000346495 FAM182AQ5T1J6 154 aa22.02■■□□□ 1.11
TSPAN3-202ENST00000346495 NADSYN1Q6IA69 706 aa22.02■■□□□ 1.11
TSPAN3-202ENST00000346495 PID1Q7Z2X4 250 aa22.02■■□□□ 1.11
TSPAN3-202ENST00000346495 TMEM150AQ86TG1 271 aa22.02■■□□□ 1.11
TSPAN3-202ENST00000346495 UMODL1-AS1Q8N2C9 162 aa22.02■■□□□ 1.11
TSPAN3-202ENST00000346495 ELMOD1Q8N336 334 aa22.02■■□□□ 1.11
TSPAN3-202ENST00000346495 DEPDC1BQ8WUY9 529 aa22.02■■□□□ 1.11
TSPAN3-202ENST00000346495 KLF16Q9BXK1 252 aaPredicted RBP22.02■■□□□ 1.11
TSPAN3-202ENST00000346495 ROPN1BQ9BZX4 212 aaPredicted RBP22.02■■□□□ 1.11
TSPAN3-202ENST00000346495 ROPN1Q9HAT0 212 aaPredicted RBP22.02■■□□□ 1.11
TSPAN3-202ENST00000346495 IL21Q9HBE4 155 aa22.02■■□□□ 1.11
TSPAN3-202ENST00000346495 MTCL1Q9Y4B5 1905 aaKnown RBP22.01■■□□□ 1.11
TSPAN3-202ENST00000346495 C2orf78A6NCI8 922 aa22.01■■□□□ 1.11
TSPAN3-202ENST00000346495 F5H5T6 163 aa22.01■■□□□ 1.11
TSPAN3-202ENST00000346495 DNAJB1P25685 340 aa22.01■■□□□ 1.11
TSPAN3-202ENST00000346495 CDK16Q00536 496 aa22.01■■□□□ 1.11
TSPAN3-202ENST00000346495 TIGD7Q6NT04 549 aaPredicted RBP22.01■■□□□ 1.11
TSPAN3-202ENST00000346495 IGSF8Q969P0 613 aa22.01■■□□□ 1.11
TSPAN3-202ENST00000346495 ATP6V1G3Q96LB4 118 aa22.01■■□□□ 1.11
TSPAN3-202ENST00000346495 RPRD1AQ96P16 312 aaPredicted RBP22.01■■□□□ 1.11
TSPAN3-202ENST00000346495 RNF38Q9H0F5 515 aa22.01■■□□□ 1.11
TSPAN3-202ENST00000346495 EIF2B3Q9NR50 452 aaKnown RBP22.01■■□□□ 1.11
TSPAN3-202ENST00000346495 NDFIP2Q9NV92 336 aa22.01■■□□□ 1.11
TSPAN3-202ENST00000346495 GOLGA6CA6NDK9 693 aa22■■□□□ 1.11
TSPAN3-202ENST00000346495 HIDE1A8MVS5 230 aa22■■□□□ 1.11
TSPAN3-202ENST00000346495 HMGB1P1B2RPK0 211 aaPredicted RBP22■■□□□ 1.11
TSPAN3-202ENST00000346495 STC2O76061 302 aa22■■□□□ 1.11
TSPAN3-202ENST00000346495 GOLGA6DP0CG33 693 aa22■■□□□ 1.11
TSPAN3-202ENST00000346495 LMAN1P49257 510 aa22■■□□□ 1.11
TSPAN3-202ENST00000346495 SARNPP82979 210 aaKnown RBP22■■□□□ 1.11
TSPAN3-202ENST00000346495 FASTKD3Q14CZ7 662 aaKnown RBP22■■□□□ 1.11
TSPAN3-202ENST00000346495 BBS9Q3SYG4 887 aa22■■□□□ 1.11
TSPAN3-202ENST00000346495 C5orf22Q49AR2 442 aa22■■□□□ 1.11
TSPAN3-202ENST00000346495 MSS51Q4VC12 460 aa22■■□□□ 1.11
TSPAN3-202ENST00000346495 TEX44Q53QW1 395 aa22■■□□□ 1.11
TSPAN3-202ENST00000346495 SYCP2LQ5T4T6 812 aa22■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms