RNA–Protein interactions for RNA: ENST00000339269.5

CDK5RAP1-201, Transcript of CDK5 regulatory subunit associated protein 1, humanhuman

TSL 1 (best) BASIC

Gene CDK5RAP1, Length 1,891 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1-201ENST00000339269 M0QZQ0 153 aa13.31□□□□□ -0.28
CDK5RAP1-201ENST00000339269 PPP1R12AO14974 1030 aaPredicted RBP13.31□□□□□ -0.28
CDK5RAP1-201ENST00000339269 DNAJC6O75061 913 aa13.31□□□□□ -0.28
CDK5RAP1-201ENST00000339269 SNNO75324 88 aaPredicted RBP13.31□□□□□ -0.28
CDK5RAP1-201ENST00000339269 KRT38O76015 456 aa13.31□□□□□ -0.28
CDK5RAP1-201ENST00000339269 POMCP01189 267 aa13.31□□□□□ -0.28
CDK5RAP1-201ENST00000339269 TROVE2P10155 538 aaKnown RBP eCLIP13.31□□□□□ -0.28
CDK5RAP1-201ENST00000339269 SERPINB9P50453 376 aa13.31□□□□□ -0.28
CDK5RAP1-201ENST00000339269 TPI1P60174 286 aa13.31□□□□□ -0.28
CDK5RAP1-201ENST00000339269 GALNT2Q10471 571 aa13.31□□□□□ -0.28
CDK5RAP1-201ENST00000339269 SETDB1Q15047 1291 aa13.31□□□□□ -0.28
CDK5RAP1-201ENST00000339269 INTS6LQ5JSJ4 861 aaKnown RBP13.31□□□□□ -0.28
CDK5RAP1-201ENST00000339269 FYB2Q5VWT5 728 aa13.31□□□□□ -0.28
CDK5RAP1-201ENST00000339269 CES3Q6UWW8 571 aa13.31□□□□□ -0.28
CDK5RAP1-201ENST00000339269 ATG14Q6ZNE5 492 aa13.31□□□□□ -0.28
CDK5RAP1-201ENST00000339269 NDUFAF2Q8N183 169 aa13.31□□□□□ -0.28
CDK5RAP1-201ENST00000339269 CCNYQ8ND76 341 aa13.31□□□□□ -0.28
CDK5RAP1-201ENST00000339269 PTCD3Q96EY7 689 aaKnown RBP13.31□□□□□ -0.28
CDK5RAP1-201ENST00000339269 ZNF419Q96HQ0 510 aaPredicted RBP13.31□□□□□ -0.28
CDK5RAP1-201ENST00000339269 MIPEPQ99797 713 aa13.31□□□□□ -0.28
CDK5RAP1-201ENST00000339269 TMEM120AQ9BXJ8 343 aa13.31□□□□□ -0.28
CDK5RAP1-201ENST00000339269 TLE6Q9H808 572 aa13.31□□□□□ -0.28
CDK5RAP1-201ENST00000339269 XPNPEP3Q9NQH7 507 aa13.31□□□□□ -0.28
CDK5RAP1-201ENST00000339269 BAIAP2L1Q9UHR4 511 aa13.31□□□□□ -0.28
CDK5RAP1-201ENST00000339269 NLRC5Q86WI3 1866 aa13.31□□□□□ -0.28
CDK5RAP1-201ENST00000339269 USP12O75317 370 aa13.31□□□□□ -0.28
CDK5RAP1-201ENST00000339269 BPGMP07738 259 aa13.31□□□□□ -0.28
CDK5RAP1-201ENST00000339269 PRKAR2AP13861 404 aaKnown RBP13.31□□□□□ -0.28
CDK5RAP1-201ENST00000339269 BDNFP23560 247 aa13.31□□□□□ -0.28
CDK5RAP1-201ENST00000339269 PCSK1P29120 753 aa13.31□□□□□ -0.28
CDK5RAP1-201ENST00000339269 ALDH3A1P30838 453 aa13.31□□□□□ -0.28
CDK5RAP1-201ENST00000339269 GMPRP36959 345 aa13.31□□□□□ -0.28
CDK5RAP1-201ENST00000339269 SMAD1Q15797 465 aaKnown RBP13.31□□□□□ -0.28
CDK5RAP1-201ENST00000339269 PREPLQ4J6C6 727 aaPredicted RBP13.31□□□□□ -0.28
CDK5RAP1-201ENST00000339269 MFSD14CQ5VZR4 134 aa13.31□□□□□ -0.28
CDK5RAP1-201ENST00000339269 TTC7BQ86TV6 843 aa13.31□□□□□ -0.28
CDK5RAP1-201ENST00000339269 ZNF598Q86UK7 904 aaKnown RBP13.31□□□□□ -0.28
CDK5RAP1-201ENST00000339269 KLHDC8BQ8IXV7 354 aa13.31□□□□□ -0.28
CDK5RAP1-201ENST00000339269 SCML4Q8N228 414 aa13.31□□□□□ -0.28
CDK5RAP1-201ENST00000339269 STKLD1Q8NE28 680 aa13.31□□□□□ -0.28
CDK5RAP1-201ENST00000339269 KLHDC9Q8NEP7 349 aa13.31□□□□□ -0.28
CDK5RAP1-201ENST00000339269 OR52K1Q8NGK4 314 aa13.31□□□□□ -0.28
CDK5RAP1-201ENST00000339269 DQX1Q8TE96 717 aaKnown RBP13.31□□□□□ -0.28
CDK5RAP1-201ENST00000339269 PGBD4Q96DM1 585 aa13.31□□□□□ -0.28
CDK5RAP1-201ENST00000339269 C7orf26Q96N11 449 aa13.31□□□□□ -0.28
CDK5RAP1-201ENST00000339269 CASS4Q9NQ75 786 aa13.31□□□□□ -0.28
CDK5RAP1-201ENST00000339269 FBXO6Q9NRD1 293 aaPredicted RBP13.31□□□□□ -0.28
CDK5RAP1-201ENST00000339269 ARL8BQ9NVJ2 186 aa13.31□□□□□ -0.28
CDK5RAP1-201ENST00000339269 RAD54BQ9Y620 910 aa13.31□□□□□ -0.28
CDK5RAP1-201ENST00000339269 PTPRDP23468 1912 aa13.3□□□□□ -0.28
CDK5RAP1-201ENST00000339269 A0A0G2JND7 137 aa13.3□□□□□ -0.28
CDK5RAP1-201ENST00000339269 A0A0U1RQF3 1178 aa13.3□□□□□ -0.28
CDK5RAP1-201ENST00000339269 CAPN9O14815 690 aa13.3□□□□□ -0.28
CDK5RAP1-201ENST00000339269 GPR182O15218 404 aa13.3□□□□□ -0.28
CDK5RAP1-201ENST00000339269 ZBTB24O43167 697 aaPredicted RBP13.3□□□□□ -0.28
CDK5RAP1-201ENST00000339269 STK10O94804 968 aaKnown RBP13.3□□□□□ -0.28
CDK5RAP1-201ENST00000339269 LRIG2O94898 1065 aa13.3□□□□□ -0.28
CDK5RAP1-201ENST00000339269 AP2A1O95782 977 aa13.3□□□□□ -0.28
CDK5RAP1-201ENST00000339269 F7P08709 466 aaPredicted RBP13.3□□□□□ -0.28
CDK5RAP1-201ENST00000339269 GM2AP17900 193 aa13.3□□□□□ -0.28
CDK5RAP1-201ENST00000339269 THPOP40225 353 aa13.3□□□□□ -0.28
CDK5RAP1-201ENST00000339269 SARNPP82979 210 aaKnown RBP13.3□□□□□ -0.28
CDK5RAP1-201ENST00000339269 CACNB2Q08289 660 aaPredicted RBP13.3□□□□□ -0.28
CDK5RAP1-201ENST00000339269 PDE1CQ14123 709 aaPredicted RBP13.3□□□□□ -0.28
CDK5RAP1-201ENST00000339269 BSPRYQ5W0U4 402 aa13.3□□□□□ -0.28
CDK5RAP1-201ENST00000339269 ZNF449Q6P9G9 518 aa13.3□□□□□ -0.28
CDK5RAP1-201ENST00000339269 RSPH3Q86UC2 560 aa13.3□□□□□ -0.28
CDK5RAP1-201ENST00000339269 HASPINQ8TF76 798 aa13.3□□□□□ -0.28
CDK5RAP1-201ENST00000339269 IRGQQ8WZA9 623 aa13.3□□□□□ -0.28
CDK5RAP1-201ENST00000339269 INPP5DQ92835 1189 aa13.3□□□□□ -0.28
CDK5RAP1-201ENST00000339269 HDAC11Q96DB2 347 aa13.3□□□□□ -0.28
CDK5RAP1-201ENST00000339269 ACBD6Q9BR61 282 aa13.3□□□□□ -0.28
CDK5RAP1-201ENST00000339269 TRIM55Q9BYV6 548 aa13.3□□□□□ -0.28
CDK5RAP1-201ENST00000339269 TKTL2Q9H0I9 626 aa13.3□□□□□ -0.28
CDK5RAP1-201ENST00000339269 GBA3Q9H227 469 aa13.3□□□□□ -0.28
CDK5RAP1-201ENST00000339269 HEY2Q9UBP5 337 aa13.3□□□□□ -0.28
CDK5RAP1-201ENST00000339269 LNPEPQ9UIQ6 1025 aa13.3□□□□□ -0.28
CDK5RAP1-201ENST00000339269 ZFP69BQ9UJL9 534 aa13.3□□□□□ -0.28
CDK5RAP1-201ENST00000339269 PATJQ8NI35 1801 aa13.3□□□□□ -0.28
CDK5RAP1-201ENST00000339269 ZCWPW2A0A1B0GU75 182 aa13.29□□□□□ -0.28
CDK5RAP1-201ENST00000339269 CCDC195A0A1B0GUA6 201 aa13.29□□□□□ -0.28
CDK5RAP1-201ENST00000339269 FAM237BA0A1B0GVD1 139 aa13.29□□□□□ -0.28
CDK5RAP1-201ENST00000339269 TPP1O14773 563 aa13.29□□□□□ -0.28
CDK5RAP1-201ENST00000339269 SEPT4O43236 478 aa13.29□□□□□ -0.28
CDK5RAP1-201ENST00000339269 ATP5HO75947 161 aa13.29□□□□□ -0.28
CDK5RAP1-201ENST00000339269 ASGR1P07306 291 aa13.29□□□□□ -0.28
CDK5RAP1-201ENST00000339269 ERVK-10P10266 1014 aa13.29□□□□□ -0.28
CDK5RAP1-201ENST00000339269 ODC1P11926 461 aa13.29□□□□□ -0.28
CDK5RAP1-201ENST00000339269 CCL5P13501 91 aa13.29□□□□□ -0.28
CDK5RAP1-201ENST00000339269 SERPINB3P29508 390 aa13.29□□□□□ -0.28
CDK5RAP1-201ENST00000339269 GARSP41250 739 aaKnown RBP13.29□□□□□ -0.28
CDK5RAP1-201ENST00000339269 MAGEA12P43365 314 aa13.29□□□□□ -0.28
CDK5RAP1-201ENST00000339269 CHI3L2Q15782 390 aa13.29□□□□□ -0.28
CDK5RAP1-201ENST00000339269 LGSNQ5TDP6 509 aa13.29□□□□□ -0.28
CDK5RAP1-201ENST00000339269 C16orf46Q6P387 395 aa13.29□□□□□ -0.28
CDK5RAP1-201ENST00000339269 CASC4Q6P4E1 433 aa13.29□□□□□ -0.28
CDK5RAP1-201ENST00000339269 PID1Q7Z2X4 250 aa13.29□□□□□ -0.28
CDK5RAP1-201ENST00000339269 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.29□□□□□ -0.28
CDK5RAP1-201ENST00000339269 SCAMP5Q8TAC9 235 aa13.29□□□□□ -0.28
CDK5RAP1-201ENST00000339269 RSPH1Q8WYR4 309 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms