RNA–Protein interactions for RNA: ENST00000338368.7

PRKDC-202, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKDC, Length 12,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-202ENST00000338368 KIF3CO14782 793 aa6.43□□□□□ -1.38
PRKDC-202ENST00000338368 OR4Q2P0C623 313 aa6.43□□□□□ -1.38
PRKDC-202ENST00000338368 KCNA10Q16322 511 aa6.43□□□□□ -1.38
PRKDC-202ENST00000338368 SH3PXD2AQ5TCZ1 1133 aa6.43□□□□□ -1.38
PRKDC-202ENST00000338368 TTC23LQ6PF05 361 aa6.43□□□□□ -1.38
PRKDC-202ENST00000338368 MRPS31Q92665 395 aaKnown RBP6.43□□□□□ -1.38
PRKDC-202ENST00000338368 LATS2Q9NRM7 1088 aa6.43□□□□□ -1.38
PRKDC-202ENST00000338368 IGKV6-21A0A0C4DH24 114 aa6.43□□□□□ -1.38
PRKDC-202ENST00000338368 TSPAN3O60637 253 aa6.43□□□□□ -1.38
PRKDC-202ENST00000338368 CALB2P22676 271 aa6.43□□□□□ -1.38
PRKDC-202ENST00000338368 PEX19P40855 299 aa6.43□□□□□ -1.38
PRKDC-202ENST00000338368 CLCNKBP51801 687 aa6.43□□□□□ -1.38
PRKDC-202ENST00000338368 CSHL1Q14406 222 aa6.43□□□□□ -1.38
PRKDC-202ENST00000338368 PREPLQ4J6C6 727 aaPredicted RBP6.43□□□□□ -1.38
PRKDC-202ENST00000338368 TEX44Q53QW1 395 aa6.43□□□□□ -1.38
PRKDC-202ENST00000338368 CD274Q9NZQ7 290 aa6.43□□□□□ -1.38
PRKDC-202ENST00000338368 ARHGAP26Q9UNA1 814 aa6.43□□□□□ -1.38
PRKDC-202ENST00000338368 FCHO1O14526 889 aa6.43□□□□□ -1.38
PRKDC-202ENST00000338368 RTN3O95197 1032 aaPredicted RBP6.43□□□□□ -1.38
PRKDC-202ENST00000338368 HDAC4P56524 1084 aa6.43□□□□□ -1.38
PRKDC-202ENST00000338368 TEDDM1Q5T9Z0 273 aa6.43□□□□□ -1.38
PRKDC-202ENST00000338368 RETSATQ6NUM9 610 aa6.43□□□□□ -1.38
PRKDC-202ENST00000338368 TRIML2Q8N7C3 387 aa6.43□□□□□ -1.38
PRKDC-202ENST00000338368 LPCAT1Q8NF37 534 aa6.43□□□□□ -1.38
PRKDC-202ENST00000338368 TMEM237Q96Q45 408 aa6.43□□□□□ -1.38
PRKDC-202ENST00000338368 MYLK2Q9H1R3 596 aa6.43□□□□□ -1.38
PRKDC-202ENST00000338368 SYTL2Q9HCH5 934 aa6.43□□□□□ -1.38
PRKDC-202ENST00000338368 NCKIPSDQ9NZQ3 722 aa6.43□□□□□ -1.38
PRKDC-202ENST00000338368 VPS28Q9UK41 221 aa6.43□□□□□ -1.38
PRKDC-202ENST00000338368 GLI3P10071 1580 aa6.43□□□□□ -1.38
PRKDC-202ENST00000338368 GSTA4O15217 222 aa6.43□□□□□ -1.38
PRKDC-202ENST00000338368 PDHA1P08559 390 aa6.43□□□□□ -1.38
PRKDC-202ENST00000338368 MLNP12872 115 aa6.43□□□□□ -1.38
PRKDC-202ENST00000338368 ATXN1P54253 815 aaKnown RBP6.43□□□□□ -1.38
PRKDC-202ENST00000338368 ST8SIA6P61647 398 aa6.43□□□□□ -1.38
PRKDC-202ENST00000338368 OLFML2BQ68BL8 750 aa6.43□□□□□ -1.38
PRKDC-202ENST00000338368 ARHGAP17Q68EM7 881 aa6.43□□□□□ -1.38
PRKDC-202ENST00000338368 KRT80Q6KB66 452 aa6.43□□□□□ -1.38
PRKDC-202ENST00000338368 NAT8LQ8N9F0 302 aa6.43□□□□□ -1.38
PRKDC-202ENST00000338368 CD101Q93033 1021 aa6.43□□□□□ -1.38
PRKDC-202ENST00000338368 SH3BP1Q9Y3L3 701 aa6.43□□□□□ -1.38
PRKDC-202ENST00000338368 CITO14578 2027 aa6.43□□□□□ -1.38
PRKDC-202ENST00000338368 DNAJC6O75061 913 aa6.43□□□□□ -1.38
PRKDC-202ENST00000338368 SRP72O76094 671 aaKnown RBP6.43□□□□□ -1.38
PRKDC-202ENST00000338368 ATP5C1P36542 298 aaKnown RBP6.43□□□□□ -1.38
PRKDC-202ENST00000338368 POLD3Q15054 466 aaPredicted RBP6.43□□□□□ -1.38
PRKDC-202ENST00000338368 TAPT1Q6NXT6 567 aa6.43□□□□□ -1.38
PRKDC-202ENST00000338368 PYROXD2Q8N2H3 581 aa6.43□□□□□ -1.38
PRKDC-202ENST00000338368 PDZD8Q8NEN9 1154 aa6.43□□□□□ -1.38
PRKDC-202ENST00000338368 PIK3R5Q8WYR1 880 aa6.43□□□□□ -1.38
PRKDC-202ENST00000338368 TRIM17Q9Y577 477 aa6.43□□□□□ -1.38
PRKDC-202ENST00000338368 CRYBG1Q9Y4K1 1723 aa6.43□□□□□ -1.38
PRKDC-202ENST00000338368 MFSD11O43934 449 aa6.43□□□□□ -1.38
PRKDC-202ENST00000338368 GLP2RO95838 553 aa6.43□□□□□ -1.38
PRKDC-202ENST00000338368 SETD3Q86TU7 594 aaPredicted RBP6.43□□□□□ -1.38
PRKDC-202ENST00000338368 SPDL1Q96EA4 605 aa6.43□□□□□ -1.38
PRKDC-202ENST00000338368 ACBD6Q9BR61 282 aa6.43□□□□□ -1.38
PRKDC-202ENST00000338368 TMEM63AO94886 807 aa6.42□□□□□ -1.38
PRKDC-202ENST00000338368 THRAP10827 490 aa6.42□□□□□ -1.38
PRKDC-202ENST00000338368 MBL2P11226 248 aaPredicted RBP6.42□□□□□ -1.38
PRKDC-202ENST00000338368 IL1RL1Q01638 556 aa6.42□□□□□ -1.38
PRKDC-202ENST00000338368 GLIS1Q8NBF1 620 aa6.42□□□□□ -1.38
PRKDC-202ENST00000338368 TRIM15Q9C019 465 aa6.42□□□□□ -1.38
PRKDC-202ENST00000338368 ATP13A1Q9HD20 1204 aa6.42□□□□□ -1.38
PRKDC-202ENST00000338368 DPP7Q9UHL4 492 aa6.42□□□□□ -1.38
PRKDC-202ENST00000338368 TAGLN3Q9UI15 199 aa6.42□□□□□ -1.38
PRKDC-202ENST00000338368 TRMT6Q9UJA5 497 aaKnown RBP6.42□□□□□ -1.38
PRKDC-202ENST00000338368 ANGPT2O15123 496 aa6.42□□□□□ -1.38
PRKDC-202ENST00000338368 NVLO15381 856 aaKnown RBP6.42□□□□□ -1.38
PRKDC-202ENST00000338368 PQBP1O60828 265 aaKnown RBP6.42□□□□□ -1.38
PRKDC-202ENST00000338368 LRG1P02750 347 aa6.42□□□□□ -1.38
PRKDC-202ENST00000338368 RBP1P09455 135 aa6.42□□□□□ -1.38
PRKDC-202ENST00000338368 CREB1P16220 341 aa6.42□□□□□ -1.38
PRKDC-202ENST00000338368 ATXN3P54252 364 aaPredicted RBP6.42□□□□□ -1.38
PRKDC-202ENST00000338368 STX5Q13190 355 aa6.42□□□□□ -1.38
PRKDC-202ENST00000338368 CDH18Q13634 790 aa6.42□□□□□ -1.38
PRKDC-202ENST00000338368 LAYNQ6UX15 382 aa6.42□□□□□ -1.38
PRKDC-202ENST00000338368 OXNAD1Q96HP4 312 aaPredicted RBP6.42□□□□□ -1.38
PRKDC-202ENST00000338368 TMEM106CQ9BVX2 250 aa6.42□□□□□ -1.38
PRKDC-202ENST00000338368 SLC4A5Q9BY07 1137 aa6.42□□□□□ -1.38
PRKDC-202ENST00000338368 NMRAL1Q9HBL8 299 aa6.42□□□□□ -1.38
PRKDC-202ENST00000338368 SAR1AQ9NR31 198 aa6.42□□□□□ -1.38
PRKDC-202ENST00000338368 LTBP4Q8N2S1 1624 aa6.42□□□□□ -1.38
PRKDC-202ENST00000338368 TLR5O60602 858 aa6.42□□□□□ -1.38
PRKDC-202ENST00000338368 HMOX2P30519 316 aa6.42□□□□□ -1.38
PRKDC-202ENST00000338368 COPAP53621 1224 aa6.42□□□□□ -1.38
PRKDC-202ENST00000338368 TBCCQ15814 346 aa6.42□□□□□ -1.38
PRKDC-202ENST00000338368 LRRC36Q1X8D7 754 aa6.42□□□□□ -1.38
PRKDC-202ENST00000338368 CCDC153Q494R4 210 aa6.42□□□□□ -1.38
PRKDC-202ENST00000338368 FAM182AQ5T1J6 154 aa6.42□□□□□ -1.38
PRKDC-202ENST00000338368 LGI2Q8N0V4 545 aa6.42□□□□□ -1.38
PRKDC-202ENST00000338368 NUP93Q8N1F7 819 aa6.42□□□□□ -1.38
PRKDC-202ENST00000338368 IL22Q9GZX6 179 aa6.42□□□□□ -1.38
PRKDC-202ENST00000338368 MRGBPQ9NV56 204 aa6.42□□□□□ -1.38
PRKDC-202ENST00000338368 UTP6Q9NYH9 597 aaKnown RBP6.42□□□□□ -1.38
PRKDC-202ENST00000338368 DNAJC25-GNG10A0A024R161 153 aa6.42□□□□□ -1.38
PRKDC-202ENST00000338368 PPEF2O14830 753 aa6.42□□□□□ -1.38
PRKDC-202ENST00000338368 ANP32DO95626 131 aa6.42□□□□□ -1.38
PRKDC-202ENST00000338368 CRTAMO95727 393 aa6.42□□□□□ -1.38
PRKDC-202ENST00000338368 CDH5P33151 784 aaPredicted RBP6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms