RNA–Protein interactions for RNA: ENST00000333213.10

TSEN54-201, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSEN54, Length 1,944 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-201ENST00000333213 FAM153CQ494X1 144 aa23.92■■□□□ 1.42
TSEN54-201ENST00000333213 SLC45A4Q5BKX6 768 aa23.92■■□□□ 1.42
TSEN54-201ENST00000333213 C12orf76Q8N812 135 aaPredicted RBP23.92■■□□□ 1.42
TSEN54-201ENST00000333213 PPARGC1AQ9UBK2 798 aaKnown RBP23.92■■□□□ 1.42
TSEN54-201ENST00000333213 FAM153AQ9UHL3 310 aa23.92■■□□□ 1.42
TSEN54-201ENST00000333213 AGO1Q9UL18 857 aaKnown RBP23.92■■□□□ 1.42
TSEN54-201ENST00000333213 SCAMP3O14828 347 aaKnown RBP23.92■■□□□ 1.42
TSEN54-201ENST00000333213 RFWD3Q6PCD5 774 aa23.92■■□□□ 1.42
TSEN54-201ENST00000333213 CHRDL2Q6WN34 429 aa23.92■■□□□ 1.42
TSEN54-201ENST00000333213 GRASPQ7Z6J2 395 aaPredicted RBP23.92■■□□□ 1.42
TSEN54-201ENST00000333213 CCDC89Q8N998 374 aa23.92■■□□□ 1.42
TSEN54-201ENST00000333213 RSAD2Q8WXG1 361 aa23.92■■□□□ 1.42
TSEN54-201ENST00000333213 CELF6Q96J87 481 aaKnown RBP23.92■■□□□ 1.42
TSEN54-201ENST00000333213 GDAP1L1Q96MZ0 367 aa23.92■■□□□ 1.42
TSEN54-201ENST00000333213 QKIQ96PU8 341 aaKnown RBP eCLIP23.92■■□□□ 1.42
TSEN54-201ENST00000333213 PCDH9Q9HC56 1237 aa23.92■■□□□ 1.42
TSEN54-201ENST00000333213 FAM114A2Q9NRY5 505 aa23.92■■□□□ 1.42
TSEN54-201ENST00000333213 ZNF212Q9UDV6 495 aa23.92■■□□□ 1.42
TSEN54-201ENST00000333213 NUP205Q92621 2012 aa23.91■■□□□ 1.42
TSEN54-201ENST00000333213 DOCK4Q8N1I0 1966 aa23.91■■□□□ 1.42
TSEN54-201ENST00000333213 DRGXA6NNA5 263 aa23.91■■□□□ 1.42
TSEN54-201ENST00000333213 FGF10O15520 208 aaPredicted RBP23.91■■□□□ 1.42
TSEN54-201ENST00000333213 KCNN4O15554 427 aa23.91■■□□□ 1.42
TSEN54-201ENST00000333213 TACR2P21452 398 aa23.91■■□□□ 1.42
TSEN54-201ENST00000333213 STIP1P31948 543 aaKnown RBP23.91■■□□□ 1.42
TSEN54-201ENST00000333213 SMAD3P84022 425 aaKnown RBP23.91■■□□□ 1.42
TSEN54-201ENST00000333213 PRSS36Q5K4E3 855 aa23.91■■□□□ 1.42
TSEN54-201ENST00000333213 PDZD4Q76G19 769 aaPredicted RBP23.91■■□□□ 1.42
TSEN54-201ENST00000333213 CHSY1Q86X52 802 aa23.91■■□□□ 1.42
TSEN54-201ENST00000333213 ARHGAP12Q8IWW6 846 aa23.91■■□□□ 1.42
TSEN54-201ENST00000333213 RTL3Q8N8U3 475 aaKnown RBP23.91■■□□□ 1.42
TSEN54-201ENST00000333213 FBXO25Q8TCJ0 367 aa23.91■■□□□ 1.42
TSEN54-201ENST00000333213 ADAM7Q9H2U9 754 aa23.91■■□□□ 1.42
TSEN54-201ENST00000333213 CATSPERBQ9H7T0 1116 aa23.91■■□□□ 1.42
TSEN54-201ENST00000333213 PDE4DIPQ5VU43 2346 aa23.91■■□□□ 1.42
TSEN54-201ENST00000333213 MYO9BQ13459 2157 aa23.91■■□□□ 1.42
TSEN54-201ENST00000333213 CKMP06732 381 aa23.9■■□□□ 1.42
TSEN54-201ENST00000333213 RPL22P35268 128 aaKnown RBP23.9■■□□□ 1.42
TSEN54-201ENST00000333213 ADCY8P40145 1251 aa23.9■■□□□ 1.42
TSEN54-201ENST00000333213 SLC7A9P82251 487 aa23.9■■□□□ 1.42
TSEN54-201ENST00000333213 HLTFQ14527 1009 aaKnown RBP eCLIP23.9■■□□□ 1.42
TSEN54-201ENST00000333213 PRKD1Q15139 912 aaPredicted RBP23.9■■□□□ 1.42
TSEN54-201ENST00000333213 TEAD2Q15562 447 aa23.9■■□□□ 1.42
TSEN54-201ENST00000333213 CIR1Q86X95 450 aaPredicted RBP23.9■■□□□ 1.42
TSEN54-201ENST00000333213 EIF1ADQ8N9N8 165 aaKnown RBP23.9■■□□□ 1.42
TSEN54-201ENST00000333213 AZIN2Q96A70 460 aa23.9■■□□□ 1.42
TSEN54-201ENST00000333213 MRPL38Q96DV4 380 aaKnown RBP23.9■■□□□ 1.42
TSEN54-201ENST00000333213 RTP4Q96DX8 246 aa23.9■■□□□ 1.42
TSEN54-201ENST00000333213 ZYG11BQ9C0D3 744 aa23.9■■□□□ 1.42
TSEN54-201ENST00000333213 SMG9Q9H0W8 520 aaKnown RBP23.9■■□□□ 1.42
TSEN54-201ENST00000333213 WASH4PA8MWX3 477 aa23.9■■□□□ 1.42
TSEN54-201ENST00000333213 PLTPP55058 493 aa23.9■■□□□ 1.42
TSEN54-201ENST00000333213 GALNT2Q10471 571 aa23.9■■□□□ 1.42
TSEN54-201ENST00000333213 BZW1Q7L1Q6 419 aaKnown RBP23.9■■□□□ 1.42
TSEN54-201ENST00000333213 TFAP2DQ7Z6R9 452 aa23.9■■□□□ 1.42
TSEN54-201ENST00000333213 TFB1MQ8WVM0 346 aaKnown RBP23.9■■□□□ 1.42
TSEN54-201ENST00000333213 GCNAQ96QF7 691 aa23.9■■□□□ 1.42
TSEN54-201ENST00000333213 NOL6Q9H6R4 1146 aaKnown RBP23.9■■□□□ 1.42
TSEN54-201ENST00000333213 TRDMT1O14717 391 aaKnown RBP23.89■■□□□ 1.42
TSEN54-201ENST00000333213 XYLBO75191 536 aa23.89■■□□□ 1.42
TSEN54-201ENST00000333213 SLC11A2P49281 568 aa23.89■■□□□ 1.42
TSEN54-201ENST00000333213 PDK1Q15118 436 aa23.89■■□□□ 1.42
TSEN54-201ENST00000333213 P3H1Q32P28 736 aa23.89■■□□□ 1.42
TSEN54-201ENST00000333213 C5orf22Q49AR2 442 aa23.89■■□□□ 1.42
TSEN54-201ENST00000333213 LRRC31Q6UY01 552 aa23.89■■□□□ 1.42
TSEN54-201ENST00000333213 SRLQ86TD4 932 aa23.89■■□□□ 1.42
TSEN54-201ENST00000333213 CDKL3Q8IVW4 592 aaPredicted RBP23.89■■□□□ 1.42
TSEN54-201ENST00000333213 DEPDC1BQ8WUY9 529 aa23.89■■□□□ 1.42
TSEN54-201ENST00000333213 ART4Q93070 314 aa23.89■■□□□ 1.42
TSEN54-201ENST00000333213 PRICKLE1Q96MT3 831 aaPredicted RBP23.89■■□□□ 1.42
TSEN54-201ENST00000333213 RPRD1AQ96P16 312 aaPredicted RBP23.89■■□□□ 1.42
TSEN54-201ENST00000333213 DPP7Q9UHL4 492 aa23.89■■□□□ 1.42
TSEN54-201ENST00000333213 PAPLNO95428 1278 aa23.88■■□□□ 1.41
TSEN54-201ENST00000333213 RHOQP17081 205 aa23.88■■□□□ 1.41
TSEN54-201ENST00000333213 SERPINB6P35237 376 aa23.88■■□□□ 1.41
TSEN54-201ENST00000333213 SGSHP51688 502 aa23.88■■□□□ 1.41
TSEN54-201ENST00000333213 GPS1Q13098 491 aa23.88■■□□□ 1.41
TSEN54-201ENST00000333213 MTA1Q13330 715 aa23.88■■□□□ 1.41
TSEN54-201ENST00000333213 GPR158Q5T848 1215 aa23.88■■□□□ 1.41
TSEN54-201ENST00000333213 AFMIDQ63HM1 303 aa23.88■■□□□ 1.41
TSEN54-201ENST00000333213 EMBQ6PCB8 327 aa23.88■■□□□ 1.41
TSEN54-201ENST00000333213 TMC5Q6UXY8 1006 aa23.88■■□□□ 1.41
TSEN54-201ENST00000333213 LGI2Q8N0V4 545 aa23.88■■□□□ 1.41
TSEN54-201ENST00000333213 CFAP52Q8N1V2 620 aa23.88■■□□□ 1.41
TSEN54-201ENST00000333213 SNF8Q96H20 258 aa23.88■■□□□ 1.41
TSEN54-201ENST00000333213 SLC39A8Q9C0K1 460 aa23.88■■□□□ 1.41
TSEN54-201ENST00000333213 TMEM248Q9NWD8 314 aa23.88■■□□□ 1.41
TSEN54-201ENST00000333213 WHRNQ9P202 907 aa23.88■■□□□ 1.41
TSEN54-201ENST00000333213 STOML2Q9UJZ1 356 aa23.88■■□□□ 1.41
TSEN54-201ENST00000333213 UNC80Q8N2C7 3258 aa23.88■■□□□ 1.41
TSEN54-201ENST00000333213 TRAV19A0A0A6YYK7 116 aa23.88■■□□□ 1.41
TSEN54-201ENST00000333213 HACD1B0YJ81 288 aa23.88■■□□□ 1.41
TSEN54-201ENST00000333213 GLP2RO95838 553 aa23.88■■□□□ 1.41
TSEN54-201ENST00000333213 POU2F2P09086 479 aa23.88■■□□□ 1.41
TSEN54-201ENST00000333213 GARSP41250 739 aaKnown RBP23.88■■□□□ 1.41
TSEN54-201ENST00000333213 RGS19P49795 217 aa23.88■■□□□ 1.41
TSEN54-201ENST00000333213 AP1B1Q10567 949 aa23.88■■□□□ 1.41
TSEN54-201ENST00000333213 ACBD5Q5T8D3 534 aaPredicted RBP23.88■■□□□ 1.41
TSEN54-201ENST00000333213 Q6ZNB5 142 aa23.88■■□□□ 1.41
TSEN54-201ENST00000333213 ARHGAP36Q6ZRI8 547 aa23.88■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms