RNA–Protein interactions for RNA: ENST00000329553.2

RIPPLY3-201, Transcript of ripply transcriptional repressor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIPPLY3, Length 2,235 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3-201ENST00000329553 ANKS4BQ8N8V4 417 aa20.82■□□□□ 0.92
RIPPLY3-201ENST00000329553 DEPDC1BQ8WUY9 529 aa20.82■□□□□ 0.92
RIPPLY3-201ENST00000329553 CELF6Q96J87 481 aaKnown RBP20.82■□□□□ 0.92
RIPPLY3-201ENST00000329553 YME1L1Q96TA2 773 aa20.82■□□□□ 0.92
RIPPLY3-201ENST00000329553 TTLL2Q9BWV7 592 aa20.82■□□□□ 0.92
RIPPLY3-201ENST00000329553 IL23AQ9NPF7 189 aa20.82■□□□□ 0.92
RIPPLY3-201ENST00000329553 KCNK1O00180 336 aa20.81■□□□□ 0.92
RIPPLY3-201ENST00000329553 HOXC13P31276 330 aa20.81■□□□□ 0.92
RIPPLY3-201ENST00000329553 SERPINB6P35237 376 aa20.81■□□□□ 0.92
RIPPLY3-201ENST00000329553 PPIDQ08752 370 aaKnown RBP20.81■□□□□ 0.92
RIPPLY3-201ENST00000329553 GALNT2Q10471 571 aa20.81■□□□□ 0.92
RIPPLY3-201ENST00000329553 PPP1R21Q6ZMI0 780 aa20.81■□□□□ 0.92
RIPPLY3-201ENST00000329553 CAND1Q86VP6 1230 aaKnown RBP20.81■□□□□ 0.92
RIPPLY3-201ENST00000329553 MIB1Q86YT6 1006 aa20.81■□□□□ 0.92
RIPPLY3-201ENST00000329553 IGDCC3Q8IVU1 814 aa20.81■□□□□ 0.92
RIPPLY3-201ENST00000329553 FERMT1Q9BQL6 677 aa20.81■□□□□ 0.92
RIPPLY3-201ENST00000329553 CCDC77Q9BR77 488 aa20.81■□□□□ 0.92
RIPPLY3-201ENST00000329553 HERC2P3Q9BVR0 1158 aa20.81■□□□□ 0.92
RIPPLY3-201ENST00000329553 OLA1Q9NTK5 396 aaKnown RBP20.81■□□□□ 0.92
RIPPLY3-201ENST00000329553 MARCH2Q9P0N8 246 aa20.81■□□□□ 0.92
RIPPLY3-201ENST00000329553 CTNNAL1Q9UBT7 734 aa20.81■□□□□ 0.92
RIPPLY3-201ENST00000329553 F5H423 210 aaPredicted RBP20.81■□□□□ 0.92
RIPPLY3-201ENST00000329553 STK10O94804 968 aaKnown RBP20.81■□□□□ 0.92
RIPPLY3-201ENST00000329553 BAIAP3O94812 1187 aa20.81■□□□□ 0.92
RIPPLY3-201ENST00000329553 SLC2A3P11169 496 aa20.81■□□□□ 0.92
RIPPLY3-201ENST00000329553 MX2P20592 715 aa20.81■□□□□ 0.92
RIPPLY3-201ENST00000329553 SSTR1P30872 391 aa20.81■□□□□ 0.92
RIPPLY3-201ENST00000329553 MNAT1P51948 309 aa20.81■□□□□ 0.92
RIPPLY3-201ENST00000329553 SEMA5AQ13591 1074 aa20.81■□□□□ 0.92
RIPPLY3-201ENST00000329553 PIK3R6Q5UE93 754 aa20.81■□□□□ 0.92
RIPPLY3-201ENST00000329553 ZNF567Q8N184 647 aa20.81■□□□□ 0.92
RIPPLY3-201ENST00000329553 AGGF1Q8N302 714 aaeCLIP20.81■□□□□ 0.92
RIPPLY3-201ENST00000329553 HDAC11Q96DB2 347 aa20.81■□□□□ 0.92
RIPPLY3-201ENST00000329553 TBC1D31Q96DN5 1066 aa20.81■□□□□ 0.92
RIPPLY3-201ENST00000329553 C1orf74Q96LT6 269 aa20.81■□□□□ 0.92
RIPPLY3-201ENST00000329553 UBE2OQ9C0C9 1292 aaKnown RBP20.81■□□□□ 0.92
RIPPLY3-201ENST00000329553 CCSER2Q9H7U1 834 aa20.81■□□□□ 0.92
RIPPLY3-201ENST00000329553 E9PAM4 449 aa20.8■□□□□ 0.92
RIPPLY3-201ENST00000329553 OPHN1O60890 802 aa20.8■□□□□ 0.92
RIPPLY3-201ENST00000329553 GARSP41250 739 aaKnown RBP20.8■□□□□ 0.92
RIPPLY3-201ENST00000329553 ELK3P41970 407 aa20.8■□□□□ 0.92
RIPPLY3-201ENST00000329553 TUBP50607 506 aa20.8■□□□□ 0.92
RIPPLY3-201ENST00000329553 CBLBQ13191 982 aa20.8■□□□□ 0.92
RIPPLY3-201ENST00000329553 DDX53Q86TM3 631 aaKnown RBP20.8■□□□□ 0.92
RIPPLY3-201ENST00000329553 MCUQ8NE86 351 aa20.8■□□□□ 0.92
RIPPLY3-201ENST00000329553 AUTS2Q8WXX7 1259 aa20.8■□□□□ 0.92
RIPPLY3-201ENST00000329553 ARHGEF2Q92974 986 aaKnown RBP20.8■□□□□ 0.92
RIPPLY3-201ENST00000329553 SAMD15Q9P1V8 674 aa20.8■□□□□ 0.92
RIPPLY3-201ENST00000329553 DNAJC8O75937 253 aaPredicted RBP20.8■□□□□ 0.92
RIPPLY3-201ENST00000329553 TPSB2P20231 275 aa20.8■□□□□ 0.92
RIPPLY3-201ENST00000329553 ATP5DP30049 168 aa20.8■□□□□ 0.92
RIPPLY3-201ENST00000329553 HTR7P34969 479 aa20.8■□□□□ 0.92
RIPPLY3-201ENST00000329553 NRG1Q02297 640 aaPredicted RBP20.8■□□□□ 0.92
RIPPLY3-201ENST00000329553 TRIP4Q15650 581 aaPredicted RBP20.8■□□□□ 0.92
RIPPLY3-201ENST00000329553 TPSAB1Q15661 275 aa20.8■□□□□ 0.92
RIPPLY3-201ENST00000329553 C3orf62Q6ZUJ4 267 aa20.8■□□□□ 0.92
RIPPLY3-201ENST00000329553 CEP295NLQ96MC4 621 aa20.8■□□□□ 0.92
RIPPLY3-201ENST00000329553 FRMD8Q9BZ67 464 aaPredicted RBP20.8■□□□□ 0.92
RIPPLY3-201ENST00000329553 BRD8Q9H0E9 1235 aa20.8■□□□□ 0.92
RIPPLY3-201ENST00000329553 CHMP2BQ9UQN3 213 aa20.8■□□□□ 0.92
RIPPLY3-201ENST00000329553 TEX264Q9Y6I9 313 aa20.8■□□□□ 0.92
RIPPLY3-201ENST00000329553 PTPRSQ13332 1948 aa20.79■□□□□ 0.92
RIPPLY3-201ENST00000329553 SLC12A8A0AV02 714 aa20.79■□□□□ 0.92
RIPPLY3-201ENST00000329553 TLR5O60602 858 aa20.79■□□□□ 0.92
RIPPLY3-201ENST00000329553 PTPN3P26045 913 aa20.79■□□□□ 0.92
RIPPLY3-201ENST00000329553 FDFT1P37268 417 aa20.79■□□□□ 0.92
RIPPLY3-201ENST00000329553 TPGS2Q68CL5 300 aa20.79■□□□□ 0.92
RIPPLY3-201ENST00000329553 PID1Q7Z2X4 250 aa20.79■□□□□ 0.92
RIPPLY3-201ENST00000329553 PALM2Q8IXS6 379 aa20.79■□□□□ 0.92
RIPPLY3-201ENST00000329553 ATP11CQ8NB49 1132 aa20.79■□□□□ 0.92
RIPPLY3-201ENST00000329553 CATSPERBQ9H7T0 1116 aa20.79■□□□□ 0.92
RIPPLY3-201ENST00000329553 CYP4F11Q9HBI6 524 aa20.79■□□□□ 0.92
RIPPLY3-201ENST00000329553 NDFIP2Q9NV92 336 aa20.79■□□□□ 0.92
RIPPLY3-201ENST00000329553 MPP6Q9NZW5 540 aa20.79■□□□□ 0.92
RIPPLY3-201ENST00000329553 FGF10O15520 208 aaPredicted RBP20.78■□□□□ 0.92
RIPPLY3-201ENST00000329553 APOEP02649 317 aa20.78■□□□□ 0.92
RIPPLY3-201ENST00000329553 HMBSP08397 361 aa20.78■□□□□ 0.92
RIPPLY3-201ENST00000329553 VIMP08670 466 aaKnown RBP20.78■□□□□ 0.92
RIPPLY3-201ENST00000329553 HSPA1AP0DMV8 641 aaKnown RBP20.78■□□□□ 0.92
RIPPLY3-201ENST00000329553 HSPA1BP0DMV9 641 aaKnown RBP20.78■□□□□ 0.92
RIPPLY3-201ENST00000329553 DNAJB2P25686 324 aa20.78■□□□□ 0.92
RIPPLY3-201ENST00000329553 GCAP28676 217 aa20.78■□□□□ 0.92
RIPPLY3-201ENST00000329553 GRIA1P42261 906 aa20.78■□□□□ 0.92
RIPPLY3-201ENST00000329553 ZNF534Q76KX8 674 aa20.78■□□□□ 0.92
RIPPLY3-201ENST00000329553 CYP4X1Q8N118 509 aa20.78■□□□□ 0.92
RIPPLY3-201ENST00000329553 NSRP1Q9H0G5 558 aaKnown RBP20.78■□□□□ 0.92
RIPPLY3-201ENST00000329553 SHROOM3Q8TF72 1996 aa20.78■□□□□ 0.92
RIPPLY3-201ENST00000329553 EXOC1LA0A1B0GW35 172 aa20.78■□□□□ 0.92
RIPPLY3-201ENST00000329553 ZBBXA8MT70 800 aa20.78■□□□□ 0.92
RIPPLY3-201ENST00000329553 URODP06132 367 aa20.78■□□□□ 0.92
RIPPLY3-201ENST00000329553 HMGA1P17096 107 aaKnown RBP20.78■□□□□ 0.92
RIPPLY3-201ENST00000329553 IFNAR2P48551 515 aa20.78■□□□□ 0.92
RIPPLY3-201ENST00000329553 PARP6Q2NL67 630 aa20.78■□□□□ 0.92
RIPPLY3-201ENST00000329553 MS4A13Q5J8X5 152 aa20.78■□□□□ 0.92
RIPPLY3-201ENST00000329553 ARHGAP12Q8IWW6 846 aa20.78■□□□□ 0.92
RIPPLY3-201ENST00000329553 ELAC2Q9BQ52 826 aaKnown RBP20.78■□□□□ 0.92
RIPPLY3-201ENST00000329553 RABGEF1Q9UJ41 708 aa20.78■□□□□ 0.92
RIPPLY3-201ENST00000329553 TMEM120BA0PK00 339 aa20.77■□□□□ 0.92
RIPPLY3-201ENST00000329553 IGLV3-27P01718 113 aa20.77■□□□□ 0.92
RIPPLY3-201ENST00000329553 EN2P19622 333 aaPredicted RBP20.77■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms