RNA–Protein interactions for RNA: ENST00000324659.12

NLRC3-201, Transcript of NLR family CARD domain containing 3, humanhuman

TSL 5 BASIC

Gene NLRC3, Length 3,414 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLRC3-201ENST00000324659 PDK2Q15119 407 aa12.36□□□□□ -0.43
NLRC3-201ENST00000324659 PDK3Q15120 406 aa12.36□□□□□ -0.43
NLRC3-201ENST00000324659 STILQ15468 1287 aa12.36□□□□□ -0.43
NLRC3-201ENST00000324659 DLG2Q15700 870 aa12.36□□□□□ -0.43
NLRC3-201ENST00000324659 FAM91A1Q658Y4 838 aa12.36□□□□□ -0.43
NLRC3-201ENST00000324659 GRAMD4Q6IC98 578 aa12.36□□□□□ -0.43
NLRC3-201ENST00000324659 B3GNT6Q6ZMB0 384 aa12.36□□□□□ -0.43
NLRC3-201ENST00000324659 CATSPER4Q7RTX7 472 aa12.36□□□□□ -0.43
NLRC3-201ENST00000324659 TTC30AQ86WT1 665 aa12.36□□□□□ -0.43
NLRC3-201ENST00000324659 PDSS2Q86YH6 399 aa12.36□□□□□ -0.43
NLRC3-201ENST00000324659 DGCR14Q96DF8 476 aaKnown RBP12.36□□□□□ -0.43
NLRC3-201ENST00000324659 NT5C1AQ9BXI3 368 aa12.36□□□□□ -0.43
NLRC3-201ENST00000324659 PRDM16Q9HAZ2 1276 aa12.36□□□□□ -0.43
NLRC3-201ENST00000324659 PFDN4Q9NQP4 134 aa12.36□□□□□ -0.43
NLRC3-201ENST00000324659 BARX2Q9UMQ3 279 aaPredicted RBP12.36□□□□□ -0.43
NLRC3-201ENST00000324659 AP4E1Q9UPM8 1137 aa12.36□□□□□ -0.43
NLRC3-201ENST00000324659 POMPQ9Y244 141 aa12.36□□□□□ -0.43
NLRC3-201ENST00000324659 ZBTB42B2RXF5 422 aa12.36□□□□□ -0.43
NLRC3-201ENST00000324659 PPEF2O14830 753 aa12.36□□□□□ -0.43
NLRC3-201ENST00000324659 HSPA4LO95757 839 aa12.36□□□□□ -0.43
NLRC3-201ENST00000324659 PFKMP08237 780 aa12.36□□□□□ -0.43
NLRC3-201ENST00000324659 RALBP11234 206 aa12.36□□□□□ -0.43
NLRC3-201ENST00000324659 GABRB2P47870 512 aa12.36□□□□□ -0.43
NLRC3-201ENST00000324659 TMEM132DQ14C87 1099 aa12.36□□□□□ -0.43
NLRC3-201ENST00000324659 TMCO4Q5TGY1 634 aa12.36□□□□□ -0.43
NLRC3-201ENST00000324659 ARMCX2Q7L311 632 aa12.36□□□□□ -0.43
NLRC3-201ENST00000324659 ZNF554Q86TJ5 538 aa12.36□□□□□ -0.43
NLRC3-201ENST00000324659 ZNF781Q8N8C0 355 aa12.36□□□□□ -0.43
NLRC3-201ENST00000324659 COLGALT1Q8NBJ5 622 aa12.36□□□□□ -0.43
NLRC3-201ENST00000324659 OR6B3Q8NGW1 331 aa12.36□□□□□ -0.43
NLRC3-201ENST00000324659 CDKL2Q92772 493 aa12.36□□□□□ -0.43
NLRC3-201ENST00000324659 C12orf42Q96LP6 360 aa12.36□□□□□ -0.43
NLRC3-201ENST00000324659 GPR20Q99678 358 aa12.36□□□□□ -0.43
NLRC3-201ENST00000324659 MRPL45Q9BRJ2 306 aaKnown RBP12.36□□□□□ -0.43
NLRC3-201ENST00000324659 UNKQ9C0B0 810 aaKnown RBP12.36□□□□□ -0.43
NLRC3-201ENST00000324659 SETD4Q9NVD3 440 aa12.36□□□□□ -0.43
NLRC3-201ENST00000324659 SYBUQ9NX95 663 aa12.36□□□□□ -0.43
NLRC3-201ENST00000324659 HEMK1Q9Y5R4 338 aaPredicted RBP12.36□□□□□ -0.43
NLRC3-201ENST00000324659 PDLIM1O00151 329 aa12.35□□□□□ -0.43
NLRC3-201ENST00000324659 BIRC5O15392 142 aa12.35□□□□□ -0.43
NLRC3-201ENST00000324659 PAPSS1O43252 624 aaPredicted RBP12.35□□□□□ -0.43
NLRC3-201ENST00000324659 P4HA1P13674 534 aa12.35□□□□□ -0.43
NLRC3-201ENST00000324659 ITGAXP20702 1163 aa12.35□□□□□ -0.43
NLRC3-201ENST00000324659 EPHX2P34913 555 aa12.35□□□□□ -0.43
NLRC3-201ENST00000324659 RGS2P41220 211 aa12.35□□□□□ -0.43
NLRC3-201ENST00000324659 CCR10P46092 362 aa12.35□□□□□ -0.43
NLRC3-201ENST00000324659 SERPINB9P50453 376 aa12.35□□□□□ -0.43
NLRC3-201ENST00000324659 SH3D19Q5HYK7 790 aa12.35□□□□□ -0.43
NLRC3-201ENST00000324659 CELF3Q5SZQ8 465 aaKnown RBP12.35□□□□□ -0.43
NLRC3-201ENST00000324659 ARCQ7LC44 396 aa12.35□□□□□ -0.43
NLRC3-201ENST00000324659 TFB1MQ8WVM0 346 aaKnown RBP12.35□□□□□ -0.43
NLRC3-201ENST00000324659 MARK4Q96L34 752 aa12.35□□□□□ -0.43
NLRC3-201ENST00000324659 C2orf40Q9H1Z8 148 aa12.35□□□□□ -0.43
NLRC3-201ENST00000324659 PTPRHQ9HD43 1115 aa12.35□□□□□ -0.43
NLRC3-201ENST00000324659 DDX43Q9NXZ2 648 aaKnown RBP12.35□□□□□ -0.43
NLRC3-201ENST00000324659 SH3GLB1Q9Y371 365 aa12.35□□□□□ -0.43
NLRC3-201ENST00000324659 GLRA3O75311 464 aa12.35□□□□□ -0.43
NLRC3-201ENST00000324659 KLHL2O95198 593 aa12.35□□□□□ -0.43
NLRC3-201ENST00000324659 SERPINE1P05121 402 aa12.35□□□□□ -0.43
NLRC3-201ENST00000324659 ICAM3P32942 547 aa12.35□□□□□ -0.43
NLRC3-201ENST00000324659 MBTD1Q05BQ5 628 aa12.35□□□□□ -0.43
NLRC3-201ENST00000324659 SLC10A6Q3KNW5 377 aa12.35□□□□□ -0.43
NLRC3-201ENST00000324659 SLC9B1Q4ZJI4 515 aa12.35□□□□□ -0.43
NLRC3-201ENST00000324659 PPM1LQ5SGD2 360 aa12.35□□□□□ -0.43
NLRC3-201ENST00000324659 SLC9A4Q6AI14 798 aa12.35□□□□□ -0.43
NLRC3-201ENST00000324659 OLFML1Q6UWY5 402 aa12.35□□□□□ -0.43
NLRC3-201ENST00000324659 KYAT3Q6YP21 454 aaKnown RBP12.35□□□□□ -0.43
NLRC3-201ENST00000324659 TP53INP2Q8IXH6 220 aa12.35□□□□□ -0.43
NLRC3-201ENST00000324659 PLD6Q8N2A8 252 aaKnown RBP12.35□□□□□ -0.43
NLRC3-201ENST00000324659 USP13Q92995 863 aaPredicted RBP12.35□□□□□ -0.43
NLRC3-201ENST00000324659 FAM149B1Q96BN6 582 aa12.35□□□□□ -0.43
NLRC3-201ENST00000324659 SORT1Q99523 831 aa12.35□□□□□ -0.43
NLRC3-201ENST00000324659 APOL2Q9BQE5 337 aa12.35□□□□□ -0.43
NLRC3-201ENST00000324659 WDR55Q9H6Y2 383 aaPredicted RBP12.35□□□□□ -0.43
NLRC3-201ENST00000324659 GBA2Q9HCG7 927 aaPredicted RBP12.35□□□□□ -0.43
NLRC3-201ENST00000324659 ERAP1Q9NZ08 941 aa12.35□□□□□ -0.43
NLRC3-201ENST00000324659 INPP5FQ9Y2H2 1132 aa12.35□□□□□ -0.43
NLRC3-201ENST00000324659 CENPFP49454 3210 aa12.35□□□□□ -0.43
NLRC3-201ENST00000324659 KCNK1O00180 336 aa12.34□□□□□ -0.43
NLRC3-201ENST00000324659 ZBTB14O43829 449 aa12.34□□□□□ -0.43
NLRC3-201ENST00000324659 AMHP03971 560 aa12.34□□□□□ -0.43
NLRC3-201ENST00000324659 TCN1P20061 433 aaPredicted RBP12.34□□□□□ -0.43
NLRC3-201ENST00000324659 PSMB4P28070 264 aa12.34□□□□□ -0.43
NLRC3-201ENST00000324659 NUDT2P50583 147 aa12.34□□□□□ -0.43
NLRC3-201ENST00000324659 PPIDQ08752 370 aaKnown RBP12.34□□□□□ -0.43
NLRC3-201ENST00000324659 TBCCQ15814 346 aa12.34□□□□□ -0.43
NLRC3-201ENST00000324659 ANKRD23Q86SG2 305 aa12.34□□□□□ -0.43
NLRC3-201ENST00000324659 NCSTNQ92542 709 aa12.34□□□□□ -0.43
NLRC3-201ENST00000324659 CNBD2Q96M20 576 aa12.34□□□□□ -0.43
NLRC3-201ENST00000324659 KCTD15Q96SI1 283 aaPredicted RBP12.34□□□□□ -0.43
NLRC3-201ENST00000324659 COG4Q9H9E3 785 aa12.34□□□□□ -0.43
NLRC3-201ENST00000324659 LIN28AQ9H9Z2 209 aaKnown RBP12.34□□□□□ -0.43
NLRC3-201ENST00000324659 GPAMQ9HCL2 828 aa12.34□□□□□ -0.43
NLRC3-201ENST00000324659 DPP3Q9NY33 737 aa12.34□□□□□ -0.43
NLRC3-201ENST00000324659 DTLQ9NZJ0 730 aa12.34□□□□□ -0.43
NLRC3-201ENST00000324659 CCL15-CCL14A0A0B4J2E2 113 aa12.34□□□□□ -0.43
NLRC3-201ENST00000324659 TRIM43BA6NCK2 446 aa12.34□□□□□ -0.43
NLRC3-201ENST00000324659 CCDC130P13994 396 aa12.34□□□□□ -0.43
NLRC3-201ENST00000324659 PROZP22891 400 aa12.34□□□□□ -0.43
NLRC3-201ENST00000324659 PKNOX1P55347 436 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms