RNA–Protein interactions for RNA: ENST00000322344.7

PNKP-201, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 2,041 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-201ENST00000322344 GIT1Q9Y2X7 761 aa22.91■■□□□ 1.26
PNKP-201ENST00000322344 GRK2P25098 689 aa22.9■■□□□ 1.26
PNKP-201ENST00000322344 GALNT2Q10471 571 aa22.9■■□□□ 1.26
PNKP-201ENST00000322344 GPRIN1Q7Z2K8 1008 aa22.9■■□□□ 1.26
PNKP-201ENST00000322344 TEX9Q8N6V9 391 aa22.9■■□□□ 1.26
PNKP-201ENST00000322344 OR52K1Q8NGK4 314 aa22.9■■□□□ 1.26
PNKP-201ENST00000322344 ADAM32Q8TC27 787 aa22.9■■□□□ 1.26
PNKP-201ENST00000322344 COLEC11Q9BWP8 271 aa22.9■■□□□ 1.26
PNKP-201ENST00000322344 GBA3Q9H227 469 aa22.9■■□□□ 1.26
PNKP-201ENST00000322344 ZNF395Q9H8N7 513 aaPredicted RBP22.9■■□□□ 1.26
PNKP-201ENST00000322344 VANGL2Q9ULK5 521 aa22.9■■□□□ 1.26
PNKP-201ENST00000322344 PSAT1Q9Y617 370 aa22.9■■□□□ 1.26
PNKP-201ENST00000322344 MAGEB16A2A368 324 aa22.89■■□□□ 1.26
PNKP-201ENST00000322344 HHLA1C9JL84 531 aa22.89■■□□□ 1.26
PNKP-201ENST00000322344 USP1O94782 785 aa22.89■■□□□ 1.26
PNKP-201ENST00000322344 SERPINE1P05121 402 aa22.89■■□□□ 1.26
PNKP-201ENST00000322344 USP17L7P0C7H9 530 aa22.89■■□□□ 1.26
PNKP-201ENST00000322344 FGF3P11487 239 aaPredicted RBP22.89■■□□□ 1.26
PNKP-201ENST00000322344 CYP2B6P20813 491 aa22.89■■□□□ 1.26
PNKP-201ENST00000322344 CXCR3P49682 368 aa22.89■■□□□ 1.26
PNKP-201ENST00000322344 CLCNKBP51801 687 aa22.89■■□□□ 1.26
PNKP-201ENST00000322344 C16orf46Q6P387 395 aa22.89■■□□□ 1.26
PNKP-201ENST00000322344 TMPRSS6Q8IU80 811 aa22.89■■□□□ 1.26
PNKP-201ENST00000322344 TP53INP2Q8IXH6 220 aa22.89■■□□□ 1.26
PNKP-201ENST00000322344 SERBP1Q8NC51 408 aaKnown RBP eCLIP22.89■■□□□ 1.26
PNKP-201ENST00000322344 KCNK16Q96T55 309 aa22.89■■□□□ 1.26
PNKP-201ENST00000322344 APBA2Q99767 749 aa22.89■■□□□ 1.26
PNKP-201ENST00000322344 C20orf27Q9GZN8 174 aa22.89■■□□□ 1.26
PNKP-201ENST00000322344 CSNK1G1Q9HCP0 422 aa22.89■■□□□ 1.26
PNKP-201ENST00000322344 ANLNQ9NQW6 1124 aa22.89■■□□□ 1.26
PNKP-201ENST00000322344 TRIP12Q14669 1992 aaPredicted RBP22.89■■□□□ 1.25
PNKP-201ENST00000322344 AP3B1O00203 1094 aa22.89■■□□□ 1.25
PNKP-201ENST00000322344 ENTPD5O75356 428 aa22.89■■□□□ 1.25
PNKP-201ENST00000322344 TOP3BO95985 862 aaKnown RBP22.89■■□□□ 1.25
PNKP-201ENST00000322344 PROCP04070 461 aa22.89■■□□□ 1.25
PNKP-201ENST00000322344 SERPINA6P08185 405 aa22.89■■□□□ 1.25
PNKP-201ENST00000322344 ERVK-10P10266 1014 aa22.89■■□□□ 1.25
PNKP-201ENST00000322344 KITP10721 976 aa22.89■■□□□ 1.25
PNKP-201ENST00000322344 IGFBP6P24592 240 aaPredicted RBP22.89■■□□□ 1.25
PNKP-201ENST00000322344 TYK2P29597 1187 aa22.89■■□□□ 1.25
PNKP-201ENST00000322344 SPRP35270 261 aaPredicted RBP22.89■■□□□ 1.25
PNKP-201ENST00000322344 MAGEA12P43365 314 aa22.89■■□□□ 1.25
PNKP-201ENST00000322344 KCTD11Q693B1 232 aa22.89■■□□□ 1.25
PNKP-201ENST00000322344 TMEM135Q86UB9 458 aa22.89■■□□□ 1.25
PNKP-201ENST00000322344 MAB21L3Q8N8X9 362 aa22.89■■□□□ 1.25
PNKP-201ENST00000322344 TTC8Q8TAM2 541 aa22.89■■□□□ 1.25
PNKP-201ENST00000322344 PIWIL2Q8TC59 973 aaKnown RBP22.89■■□□□ 1.25
PNKP-201ENST00000322344 GORASP1Q9BQQ3 440 aa22.89■■□□□ 1.25
PNKP-201ENST00000322344 BATF3Q9NR55 127 aa22.89■■□□□ 1.25
PNKP-201ENST00000322344 ARMCX1Q9P291 453 aa22.89■■□□□ 1.25
PNKP-201ENST00000322344 TAGLN3Q9UI15 199 aa22.89■■□□□ 1.25
PNKP-201ENST00000322344 MEIS3P2A8K0S8 358 aa22.88■■□□□ 1.25
PNKP-201ENST00000322344 AKR1A1P14550 325 aa22.88■■□□□ 1.25
PNKP-201ENST00000322344 SLC1A6P48664 564 aa22.88■■□□□ 1.25
PNKP-201ENST00000322344 NPY2RP49146 381 aa22.88■■□□□ 1.25
PNKP-201ENST00000322344 CLNS1AP54105 237 aaKnown RBP22.88■■□□□ 1.25
PNKP-201ENST00000322344 RPL10AP62906 217 aaKnown RBP22.88■■□□□ 1.25
PNKP-201ENST00000322344 IRX4P78413 519 aa22.88■■□□□ 1.25
PNKP-201ENST00000322344 CCDC153Q494R4 210 aa22.88■■□□□ 1.25
PNKP-201ENST00000322344 TEDDM1Q5T9Z0 273 aa22.88■■□□□ 1.25
PNKP-201ENST00000322344 RFWD3Q6PCD5 774 aa22.88■■□□□ 1.25
PNKP-201ENST00000322344 ZCCHC23Q6ZST2 131 aa22.88■■□□□ 1.25
PNKP-201ENST00000322344 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP22.88■■□□□ 1.25
PNKP-201ENST00000322344 ZNF669Q96BR6 464 aaPredicted RBP22.88■■□□□ 1.25
PNKP-201ENST00000322344 ZNF570Q96NI8 536 aa22.88■■□□□ 1.25
PNKP-201ENST00000322344 RBBP8Q99708 897 aa22.88■■□□□ 1.25
PNKP-201ENST00000322344 WDCPQ9H6R7 721 aa22.88■■□□□ 1.25
PNKP-201ENST00000322344 MARCOQ9UEW3 520 aaPredicted RBP22.88■■□□□ 1.25
PNKP-201ENST00000322344 I6L893 689 aaPredicted RBP22.87■■□□□ 1.25
PNKP-201ENST00000322344 ZBTB24O43167 697 aaPredicted RBP22.87■■□□□ 1.25
PNKP-201ENST00000322344 MAGEC1O60732 1142 aa22.87■■□□□ 1.25
PNKP-201ENST00000322344 IGHA2P01877 340 aa22.87■■□□□ 1.25
PNKP-201ENST00000322344 SERPINB8P50452 374 aa22.87■■□□□ 1.25
PNKP-201ENST00000322344 CDK7P50613 346 aa22.87■■□□□ 1.25
PNKP-201ENST00000322344 PCLAFQ15004 111 aa22.87■■□□□ 1.25
PNKP-201ENST00000322344 BHLHA9Q7RTU4 235 aa22.87■■□□□ 1.25
PNKP-201ENST00000322344 SCML4Q8N228 414 aa22.87■■□□□ 1.25
PNKP-201ENST00000322344 DNAAF3Q8N9W5 541 aa22.87■■□□□ 1.25
PNKP-201ENST00000322344 SOCS4Q8WXH5 440 aa22.87■■□□□ 1.25
PNKP-201ENST00000322344 RILPQ96NA2 401 aa22.87■■□□□ 1.25
PNKP-201ENST00000322344 FCRL3Q96P31 734 aaPredicted RBP22.87■■□□□ 1.25
PNKP-201ENST00000322344 MTG1Q9BT17 334 aaPredicted RBP22.87■■□□□ 1.25
PNKP-201ENST00000322344 TRIM62Q9BVG3 475 aa22.87■■□□□ 1.25
PNKP-201ENST00000322344 CCDC106Q9BWC9 280 aa22.87■■□□□ 1.25
PNKP-201ENST00000322344 GEMIN8Q9NWZ8 242 aaKnown RBP22.87■■□□□ 1.25
PNKP-201ENST00000322344 TIMM13Q9Y5L4 95 aaPredicted RBP22.87■■□□□ 1.25
PNKP-201ENST00000322344 SPECC1L-ADORA2AF8WAN1 911 aa22.87■■□□□ 1.25
PNKP-201ENST00000322344 DNAJB2P25686 324 aa22.87■■□□□ 1.25
PNKP-201ENST00000322344 CACNA2D1P54289 1103 aa22.87■■□□□ 1.25
PNKP-201ENST00000322344 ZNF33AQ06730 810 aa22.87■■□□□ 1.25
PNKP-201ENST00000322344 NPWQ8N729 165 aa22.87■■□□□ 1.25
PNKP-201ENST00000322344 PPP4R1Q8TF05 950 aa22.87■■□□□ 1.25
PNKP-201ENST00000322344 AGAP3Q96P47 875 aa22.87■■□□□ 1.25
PNKP-201ENST00000322344 CXorf56Q9H5V9 222 aa22.87■■□□□ 1.25
PNKP-201ENST00000322344 MIOSQ9NXC5 875 aa22.87■■□□□ 1.25
PNKP-201ENST00000322344 CACNG4Q9UBN1 327 aa22.87■■□□□ 1.25
PNKP-201ENST00000322344 LRRC42Q9Y546 428 aa22.87■■□□□ 1.25
PNKP-201ENST00000322344 ARL5CA6NH57 179 aa22.86■■□□□ 1.25
PNKP-201ENST00000322344 B2RBV5 119 aa22.86■■□□□ 1.25
PNKP-201ENST00000322344 PSMD3O43242 534 aa22.86■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms