RNA–Protein interactions for RNA: ENST00000300302.9

HERPUD1-201, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HERPUD1, Length 1,862 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-201ENST00000300302 A0A087WUV0 522 aaPredicted RBP16.13■□□□□ 0.17
HERPUD1-201ENST00000300302 TGM5O43548 720 aa16.13■□□□□ 0.17
HERPUD1-201ENST00000300302 IVLP07476 585 aa16.13■□□□□ 0.17
HERPUD1-201ENST00000300302 RHOQP17081 205 aa16.13■□□□□ 0.17
HERPUD1-201ENST00000300302 LMAN1P49257 510 aa16.13■□□□□ 0.17
HERPUD1-201ENST00000300302 HARS2P49590 506 aaKnown RBP16.13■□□□□ 0.17
HERPUD1-201ENST00000300302 CDK16Q00536 496 aa16.13■□□□□ 0.17
HERPUD1-201ENST00000300302 GAD2Q05329 585 aa16.13■□□□□ 0.17
HERPUD1-201ENST00000300302 WASHC5Q12768 1159 aa16.13■□□□□ 0.17
HERPUD1-201ENST00000300302 PARP6Q2NL67 630 aa16.13■□□□□ 0.17
HERPUD1-201ENST00000300302 FNBP1LQ5T0N5 605 aa16.13■□□□□ 0.17
HERPUD1-201ENST00000300302 UBAP2Q5T6F2 1119 aaKnown RBP16.13■□□□□ 0.17
HERPUD1-201ENST00000300302 AGBL2Q5U5Z8 902 aa16.13■□□□□ 0.17
HERPUD1-201ENST00000300302 CCDC149Q6ZUS6 474 aa16.13■□□□□ 0.17
HERPUD1-201ENST00000300302 C14orf80Q86SX3 495 aa16.13■□□□□ 0.17
HERPUD1-201ENST00000300302 LRRC49Q8IUZ0 686 aa16.13■□□□□ 0.17
HERPUD1-201ENST00000300302 ATPAF2Q8N5M1 289 aa16.13■□□□□ 0.17
HERPUD1-201ENST00000300302 BCCIPQ9P287 314 aaKnown RBP eCLIP16.13■□□□□ 0.17
HERPUD1-201ENST00000300302 KLHL8Q9P2G9 620 aaPredicted RBP16.13■□□□□ 0.17
HERPUD1-201ENST00000300302 IGLV3-10A0A075B6K4 115 aa16.12■□□□□ 0.17
HERPUD1-201ENST00000300302 KCNK1O00180 336 aa16.12■□□□□ 0.17
HERPUD1-201ENST00000300302 DFFAO00273 331 aa16.12■□□□□ 0.17
HERPUD1-201ENST00000300302 RASGRF2O14827 1237 aa16.12■□□□□ 0.17
HERPUD1-201ENST00000300302 COCHO43405 550 aa16.12■□□□□ 0.17
HERPUD1-201ENST00000300302 CCNCP24863 283 aa16.12■□□□□ 0.17
HERPUD1-201ENST00000300302 PHBP35232 272 aa16.12■□□□□ 0.17
HERPUD1-201ENST00000300302 CBLBQ13191 982 aa16.12■□□□□ 0.17
HERPUD1-201ENST00000300302 STAT4Q14765 748 aa16.12■□□□□ 0.17
HERPUD1-201ENST00000300302 BBS9Q3SYG4 887 aa16.12■□□□□ 0.17
HERPUD1-201ENST00000300302 PABPC1LQ4VXU2 614 aaKnown RBP16.12■□□□□ 0.17
HERPUD1-201ENST00000300302 RAP1GAP2Q684P5 730 aa16.12■□□□□ 0.17
HERPUD1-201ENST00000300302 KCTD16Q68DU8 428 aa16.12■□□□□ 0.17
HERPUD1-201ENST00000300302 PID1Q7Z2X4 250 aa16.12■□□□□ 0.17
HERPUD1-201ENST00000300302 ZNF683Q8IZ20 524 aa16.12■□□□□ 0.17
HERPUD1-201ENST00000300302 ZNF567Q8N184 647 aa16.12■□□□□ 0.17
HERPUD1-201ENST00000300302 PLD4Q96BZ4 506 aa16.12■□□□□ 0.17
HERPUD1-201ENST00000300302 TSGA13Q96PP4 275 aa16.12■□□□□ 0.17
HERPUD1-201ENST00000300302 TCF25Q9BQ70 676 aa16.12■□□□□ 0.17
HERPUD1-201ENST00000300302 STMN4Q9H169 189 aaPredicted RBP16.12■□□□□ 0.17
HERPUD1-201ENST00000300302 ENTPD7Q9NQZ7 604 aa16.12■□□□□ 0.17
HERPUD1-201ENST00000300302 MPP6Q9NZW5 540 aa16.12■□□□□ 0.17
HERPUD1-201ENST00000300302 IGSF9Q9P2J2 1179 aa16.12■□□□□ 0.17
HERPUD1-201ENST00000300302 NR2E3Q9Y5X4 410 aa16.12■□□□□ 0.17
HERPUD1-201ENST00000300302 IRAK3Q9Y616 596 aa16.12■□□□□ 0.17
HERPUD1-201ENST00000300302 TLDC2A0PJX2 215 aa16.12■□□□□ 0.17
HERPUD1-201ENST00000300302 LCHNA4D1U4 455 aa16.12■□□□□ 0.17
HERPUD1-201ENST00000300302 PTPN3P26045 913 aa16.12■□□□□ 0.17
HERPUD1-201ENST00000300302 SLC11A2P49281 568 aa16.12■□□□□ 0.17
HERPUD1-201ENST00000300302 GABPB1Q06547 395 aaPredicted RBP16.12■□□□□ 0.17
HERPUD1-201ENST00000300302 FASTKD3Q14CZ7 662 aaKnown RBP16.12■□□□□ 0.17
HERPUD1-201ENST00000300302 HP1BP3Q5SSJ5 553 aaPredicted RBP16.12■□□□□ 0.17
HERPUD1-201ENST00000300302 SYCP2LQ5T4T6 812 aa16.12■□□□□ 0.17
HERPUD1-201ENST00000300302 ARTNQ5T4W7 220 aa16.12■□□□□ 0.17
HERPUD1-201ENST00000300302 ITPRIPL1Q6GPH6 555 aa16.12■□□□□ 0.17
HERPUD1-201ENST00000300302 NLRP14Q86W24 1093 aa16.12■□□□□ 0.17
HERPUD1-201ENST00000300302 CHSY1Q86X52 802 aa16.12■□□□□ 0.17
HERPUD1-201ENST00000300302 ATP11CQ8NB49 1132 aa16.12■□□□□ 0.17
HERPUD1-201ENST00000300302 PGM2Q96G03 612 aa16.12■□□□□ 0.17
HERPUD1-201ENST00000300302 SERPINB12Q96P63 405 aa16.12■□□□□ 0.17
HERPUD1-201ENST00000300302 VPS37BQ9H9H4 285 aa16.12■□□□□ 0.17
HERPUD1-201ENST00000300302 EIF2B3Q9NR50 452 aaKnown RBP16.12■□□□□ 0.17
HERPUD1-201ENST00000300302 TMEM248Q9NWD8 314 aa16.12■□□□□ 0.17
HERPUD1-201ENST00000300302 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.12■□□□□ 0.17
HERPUD1-201ENST00000300302 PLXNA4Q9HCM2 1894 aa16.11■□□□□ 0.17
HERPUD1-201ENST00000300302 RGS16O15492 202 aaPredicted RBP16.11■□□□□ 0.17
HERPUD1-201ENST00000300302 TCEA3O75764 348 aa16.11■□□□□ 0.17
HERPUD1-201ENST00000300302 LRG1P02750 347 aa16.11■□□□□ 0.17
HERPUD1-201ENST00000300302 SPATA31D3P0C874 917 aa16.11■□□□□ 0.17
HERPUD1-201ENST00000300302 TSHRP16473 764 aa16.11■□□□□ 0.17
HERPUD1-201ENST00000300302 NDST2P52849 883 aa16.11■□□□□ 0.17
HERPUD1-201ENST00000300302 MSS51Q4VC12 460 aa16.11■□□□□ 0.17
HERPUD1-201ENST00000300302 CCDC38Q502W7 563 aa16.11■□□□□ 0.17
HERPUD1-201ENST00000300302 DNAJC21Q5F1R6 531 aaKnown RBP16.11■□□□□ 0.17
HERPUD1-201ENST00000300302 AFMIDQ63HM1 303 aa16.11■□□□□ 0.17
HERPUD1-201ENST00000300302 TIGD7Q6NT04 549 aaPredicted RBP16.11■□□□□ 0.17
HERPUD1-201ENST00000300302 FBXL22Q6P050 247 aa16.11■□□□□ 0.17
HERPUD1-201ENST00000300302 SPATA31D4Q6ZUB0 917 aa16.11■□□□□ 0.17
HERPUD1-201ENST00000300302 ANKMY2Q8IV38 441 aa16.11■□□□□ 0.17
HERPUD1-201ENST00000300302 ARHGAP12Q8IWW6 846 aa16.11■□□□□ 0.17
HERPUD1-201ENST00000300302 PALM2Q8IXS6 379 aa16.11■□□□□ 0.17
HERPUD1-201ENST00000300302 UMODL1-AS1Q8N2C9 162 aa16.11■□□□□ 0.17
HERPUD1-201ENST00000300302 FBXO36Q8NEA4 188 aa16.11■□□□□ 0.17
HERPUD1-201ENST00000300302 RPRD1AQ96P16 312 aaPredicted RBP16.11■□□□□ 0.17
HERPUD1-201ENST00000300302 KLHL5Q96PQ7 755 aa16.11■□□□□ 0.17
HERPUD1-201ENST00000300302 PRMT1Q99873 361 aaKnown RBP16.11■□□□□ 0.17
HERPUD1-201ENST00000300302 CEP41Q9BYV8 373 aa16.11■□□□□ 0.17
HERPUD1-201ENST00000300302 SLC39A8Q9C0K1 460 aa16.11■□□□□ 0.17
HERPUD1-201ENST00000300302 LRRC4CQ9HCJ2 640 aa16.11■□□□□ 0.17
HERPUD1-201ENST00000300302 XAB2Q9HCS7 855 aaKnown RBP16.11■□□□□ 0.17
HERPUD1-201ENST00000300302 ADAM21Q9UKJ8 722 aa16.11■□□□□ 0.17
HERPUD1-201ENST00000300302 SMIM23A6NLE4 172 aa16.1■□□□□ 0.17
HERPUD1-201ENST00000300302 DRGXA6NNA5 263 aa16.1■□□□□ 0.17
HERPUD1-201ENST00000300302 F5H5T6 163 aa16.1■□□□□ 0.17
HERPUD1-201ENST00000300302 LPXNO60711 386 aa16.1■□□□□ 0.17
HERPUD1-201ENST00000300302 OAS1P00973 400 aaKnown RBP16.1■□□□□ 0.17
HERPUD1-201ENST00000300302 KCNQ1P51787 676 aa16.1■□□□□ 0.17
HERPUD1-201ENST00000300302 GYS2P54840 703 aa16.1■□□□□ 0.17
HERPUD1-201ENST00000300302 UBE3AQ05086 875 aa16.1■□□□□ 0.17
HERPUD1-201ENST00000300302 TEX44Q53QW1 395 aa16.1■□□□□ 0.17
HERPUD1-201ENST00000300302 LILRA6Q6PI73 481 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms