RNA–Protein interactions for RNA: ENST00000290650.8

UBR1-201, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR1, Length 7,761 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-201ENST00000290650 NAIF1Q69YI7 327 aaPredicted RBP4.89□□□□□ -1.63
UBR1-201ENST00000290650 CHADLQ6NUI6 762 aa4.89□□□□□ -1.63
UBR1-201ENST00000290650 DHX30Q7L2E3 1194 aaKnown RBP eCLIP4.89□□□□□ -1.63
UBR1-201ENST00000290650 ADCK2Q7Z695 626 aa4.89□□□□□ -1.63
UBR1-201ENST00000290650 SLC44A2Q8IWA5 706 aaPredicted RBP4.89□□□□□ -1.63
UBR1-201ENST00000290650 CD302Q8IX05 232 aa4.89□□□□□ -1.63
UBR1-201ENST00000290650 LGI2Q8N0V4 545 aa4.89□□□□□ -1.63
UBR1-201ENST00000290650 CMTM5Q96DZ9 223 aa4.89□□□□□ -1.63
UBR1-201ENST00000290650 VCPIP1Q96JH7 1222 aa4.89□□□□□ -1.63
UBR1-201ENST00000290650 KCTD15Q96SI1 283 aaPredicted RBP4.89□□□□□ -1.63
UBR1-201ENST00000290650 CAPN10Q9HC96 672 aa4.89□□□□□ -1.63
UBR1-201ENST00000290650 DMAC2Q9NW81 257 aa4.89□□□□□ -1.63
UBR1-201ENST00000290650 KCNH4Q9UQ05 1017 aa4.89□□□□□ -1.63
UBR1-201ENST00000290650 SH3BP1Q9Y3L3 701 aa4.89□□□□□ -1.63
UBR1-201ENST00000290650 ORC6Q9Y5N6 252 aa4.89□□□□□ -1.63
UBR1-201ENST00000290650 SNX13Q9Y5W8 968 aa4.89□□□□□ -1.63
UBR1-201ENST00000290650 POLR2AP24928 1970 aaKnown RBP4.89□□□□□ -1.63
UBR1-201ENST00000290650 F5H5T6 163 aa4.89□□□□□ -1.63
UBR1-201ENST00000290650 FSCN2O14926 492 aa4.89□□□□□ -1.63
UBR1-201ENST00000290650 GLRA3O75311 464 aa4.89□□□□□ -1.63
UBR1-201ENST00000290650 TNFRSF8P28908 595 aa4.89□□□□□ -1.63
UBR1-201ENST00000290650 OGDHQ02218 1023 aa4.89□□□□□ -1.63
UBR1-201ENST00000290650 PPIL2Q13356 520 aa4.89□□□□□ -1.63
UBR1-201ENST00000290650 SLC45A4Q5BKX6 768 aa4.89□□□□□ -1.63
UBR1-201ENST00000290650 OLFML2BQ68BL8 750 aa4.89□□□□□ -1.63
UBR1-201ENST00000290650 SEL1L3Q68CR1 1132 aa4.89□□□□□ -1.63
UBR1-201ENST00000290650 ARHGAP17Q68EM7 881 aa4.89□□□□□ -1.63
UBR1-201ENST00000290650 ZDHHC24Q6UX98 284 aa4.89□□□□□ -1.63
UBR1-201ENST00000290650 LBX2Q6XYB7 198 aa4.89□□□□□ -1.63
UBR1-201ENST00000290650 PIK3R5Q8WYR1 880 aa4.89□□□□□ -1.63
UBR1-201ENST00000290650 POMKQ9H5K3 350 aa4.89□□□□□ -1.63
UBR1-201ENST00000290650 ASB7Q9H672 318 aa4.89□□□□□ -1.63
UBR1-201ENST00000290650 CAAP1Q9H8G2 361 aa4.89□□□□□ -1.63
UBR1-201ENST00000290650 POPDC2Q9HBU9 364 aa4.89□□□□□ -1.63
UBR1-201ENST00000290650 VTA1Q9NP79 307 aa4.89□□□□□ -1.63
UBR1-201ENST00000290650 VPS28Q9UK41 221 aa4.89□□□□□ -1.63
UBR1-201ENST00000290650 MAFBQ9Y5Q3 323 aaPredicted RBP4.89□□□□□ -1.63
UBR1-201ENST00000290650 TUBGCP6Q96RT7 1819 aa4.89□□□□□ -1.63
UBR1-201ENST00000290650 DOCK5Q9H7D0 1870 aa4.89□□□□□ -1.63
UBR1-201ENST00000290650 BTNL10A8MVZ5 291 aa4.89□□□□□ -1.63
UBR1-201ENST00000290650 TSPAN1O60635 241 aa4.89□□□□□ -1.63
UBR1-201ENST00000290650 KRT36O76013 467 aa4.89□□□□□ -1.63
UBR1-201ENST00000290650 EPHA3P29320 983 aa4.89□□□□□ -1.63
UBR1-201ENST00000290650 NAGLUP54802 743 aa4.89□□□□□ -1.63
UBR1-201ENST00000290650 TBX4P57082 545 aa4.89□□□□□ -1.63
UBR1-201ENST00000290650 TBL3Q12788 808 aaKnown RBP4.89□□□□□ -1.63
UBR1-201ENST00000290650 PREPLQ4J6C6 727 aaPredicted RBP4.89□□□□□ -1.63
UBR1-201ENST00000290650 RARS2Q5T160 578 aaKnown RBP4.89□□□□□ -1.63
UBR1-201ENST00000290650 TRMT10BQ6PF06 316 aaKnown RBP4.89□□□□□ -1.63
UBR1-201ENST00000290650 MILR1Q7Z6M3 343 aa4.89□□□□□ -1.63
UBR1-201ENST00000290650 OR52K2Q8NGK3 314 aa4.89□□□□□ -1.63
UBR1-201ENST00000290650 NAT14Q8WUY8 206 aa4.89□□□□□ -1.63
UBR1-201ENST00000290650 SMARCD1Q96GM5 515 aa4.89□□□□□ -1.63
UBR1-201ENST00000290650 SEPHS2Q99611 448 aa4.89□□□□□ -1.63
UBR1-201ENST00000290650 GPR88Q9GZN0 384 aa4.89□□□□□ -1.63
UBR1-201ENST00000290650 RERGLQ9H628 205 aa4.89□□□□□ -1.63
UBR1-201ENST00000290650 ALG9Q9H6U8 611 aa4.89□□□□□ -1.63
UBR1-201ENST00000290650 PCDH18Q9HCL0 1135 aa4.89□□□□□ -1.63
UBR1-201ENST00000290650 KIF17Q9P2E2 1029 aa4.89□□□□□ -1.63
UBR1-201ENST00000290650 DCDC2Q9UHG0 476 aa4.89□□□□□ -1.63
UBR1-201ENST00000290650 STXBP5LQ9Y2K9 1186 aa4.89□□□□□ -1.63
UBR1-201ENST00000290650 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP4.88□□□□□ -1.63
UBR1-201ENST00000290650 STK25O00506 426 aa4.88□□□□□ -1.63
UBR1-201ENST00000290650 MT-CYBP00156 380 aaPredicted RBP4.88□□□□□ -1.63
UBR1-201ENST00000290650 PAEPP09466 180 aa4.88□□□□□ -1.63
UBR1-201ENST00000290650 ERCC2P18074 760 aa4.88□□□□□ -1.63
UBR1-201ENST00000290650 LHX1P48742 406 aa4.88□□□□□ -1.63
UBR1-201ENST00000290650 BST1Q10588 318 aa4.88□□□□□ -1.63
UBR1-201ENST00000290650 ZNF177Q13360 481 aaPredicted RBP4.88□□□□□ -1.63
UBR1-201ENST00000290650 MTFR1Q15390 333 aa4.88□□□□□ -1.63
UBR1-201ENST00000290650 KCTD4Q8WVF5 259 aa4.88□□□□□ -1.63
UBR1-201ENST00000290650 CPT1BQ92523 772 aa4.88□□□□□ -1.63
UBR1-201ENST00000290650 SH3KBP1Q96B97 665 aa4.88□□□□□ -1.63
UBR1-201ENST00000290650 PGM2Q96G03 612 aa4.88□□□□□ -1.63
UBR1-201ENST00000290650 CAMKK2Q96RR4 588 aa4.88□□□□□ -1.63
UBR1-201ENST00000290650 AGAP2Q99490 1192 aa4.88□□□□□ -1.63
UBR1-201ENST00000290650 ZBTB18Q99592 522 aa4.88□□□□□ -1.63
UBR1-201ENST00000290650 TBC1D10AQ9BXI6 508 aa4.88□□□□□ -1.63
UBR1-201ENST00000290650 CDY1Q9Y6F8 540 aa4.88□□□□□ -1.63
UBR1-201ENST00000290650 ITGAVP06756 1048 aa4.88□□□□□ -1.63
UBR1-201ENST00000290650 MYL4P12829 197 aa4.88□□□□□ -1.63
UBR1-201ENST00000290650 HOXD10P28358 340 aa4.88□□□□□ -1.63
UBR1-201ENST00000290650 ASPAP45381 313 aa4.88□□□□□ -1.63
UBR1-201ENST00000290650 POU4F1Q01851 419 aa4.88□□□□□ -1.63
UBR1-201ENST00000290650 PWP1Q13610 501 aa4.88□□□□□ -1.63
UBR1-201ENST00000290650 POLD3Q15054 466 aaPredicted RBP4.88□□□□□ -1.63
UBR1-201ENST00000290650 NOMO1Q15155 1222 aa4.88□□□□□ -1.63
UBR1-201ENST00000290650 SPRED3Q2MJR0 410 aa4.88□□□□□ -1.63
UBR1-201ENST00000290650 NOMO2Q5JPE7 1267 aa4.88□□□□□ -1.63
UBR1-201ENST00000290650 SCARA3Q6AZY7 606 aa4.88□□□□□ -1.63
UBR1-201ENST00000290650 YTHDF3Q7Z739 585 aaKnown RBP4.88□□□□□ -1.63
UBR1-201ENST00000290650 DENND1CQ8IV53 801 aa4.88□□□□□ -1.63
UBR1-201ENST00000290650 CLEC4FQ8N1N0 589 aa4.88□□□□□ -1.63
UBR1-201ENST00000290650 ZNF513Q8N8E2 541 aaPredicted RBP4.88□□□□□ -1.63
UBR1-201ENST00000290650 SCAMP5Q8TAC9 235 aa4.88□□□□□ -1.63
UBR1-201ENST00000290650 NMD3Q96D46 503 aaKnown RBP4.88□□□□□ -1.63
UBR1-201ENST00000290650 PIWIL1Q96J94 861 aaKnown RBP4.88□□□□□ -1.63
UBR1-201ENST00000290650 CNDP1Q96KN2 507 aa4.88□□□□□ -1.63
UBR1-201ENST00000290650 R3HDMLQ9H3Y0 253 aa4.88□□□□□ -1.63
UBR1-201ENST00000290650 VCX3AQ9NNX9 186 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms