RNA–Protein interactions for RNA: ENST00000276573.11

TRIM55-201, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-201ENST00000276573 TAC1P20366 129 aa9.83□□□□□ -0.84
TRIM55-201ENST00000276573 CA4P22748 312 aa9.83□□□□□ -0.84
TRIM55-201ENST00000276573 CCNCP24863 283 aa9.83□□□□□ -0.84
TRIM55-201ENST00000276573 FOXN2P32314 431 aa9.83□□□□□ -0.84
TRIM55-201ENST00000276573 GBP2P32456 591 aaPredicted RBP9.83□□□□□ -0.84
TRIM55-201ENST00000276573 CD68P34810 354 aaPredicted RBP9.83□□□□□ -0.84
TRIM55-201ENST00000276573 PBX3P40426 434 aa9.83□□□□□ -0.84
TRIM55-201ENST00000276573 MNX1P50219 401 aaPredicted RBP9.83□□□□□ -0.84
TRIM55-201ENST00000276573 TUBP50607 506 aa9.83□□□□□ -0.84
TRIM55-201ENST00000276573 TLE2Q04725 743 aa9.83□□□□□ -0.84
TRIM55-201ENST00000276573 SPARCL1Q14515 664 aa9.83□□□□□ -0.84
TRIM55-201ENST00000276573 SLC1A5Q15758 541 aa9.83□□□□□ -0.84
TRIM55-201ENST00000276573 TTC39BQ5VTQ0 682 aaPredicted RBP9.83□□□□□ -0.84
TRIM55-201ENST00000276573 STEAP4Q687X5 459 aa9.83□□□□□ -0.84
TRIM55-201ENST00000276573 NUGGCQ68CJ6 796 aa9.83□□□□□ -0.84
TRIM55-201ENST00000276573 TRMT10BQ6PF06 316 aaKnown RBP9.83□□□□□ -0.84
TRIM55-201ENST00000276573 RNF19BQ6ZMZ0 732 aa9.83□□□□□ -0.84
TRIM55-201ENST00000276573 ANKS3Q6ZW76 656 aa9.83□□□□□ -0.84
TRIM55-201ENST00000276573 DEFB128Q7Z7B8 93 aa9.83□□□□□ -0.84
TRIM55-201ENST00000276573 C14orf80Q86SX3 495 aa9.83□□□□□ -0.84
TRIM55-201ENST00000276573 CCNJLQ8IV13 435 aa9.83□□□□□ -0.84
TRIM55-201ENST00000276573 ARHGAP12Q8IWW6 846 aa9.83□□□□□ -0.84
TRIM55-201ENST00000276573 CTAGE3PQ8IX95 158 aa9.83□□□□□ -0.84
TRIM55-201ENST00000276573 BANPQ8N9N5 519 aa9.83□□□□□ -0.84
TRIM55-201ENST00000276573 ZNF784Q8NCA9 323 aaPredicted RBP9.83□□□□□ -0.84
TRIM55-201ENST00000276573 GPR152Q8TDT2 470 aa9.83□□□□□ -0.84
TRIM55-201ENST00000276573 BCL7CQ8WUZ0 217 aaPredicted RBP9.83□□□□□ -0.84
TRIM55-201ENST00000276573 ARNTL2Q8WYA1 636 aa9.83□□□□□ -0.84
TRIM55-201ENST00000276573 ALKBH8Q96BT7 664 aaKnown RBP9.83□□□□□ -0.84
TRIM55-201ENST00000276573 TEKT5Q96M29 485 aa9.83□□□□□ -0.84
TRIM55-201ENST00000276573 TOX2Q96NM4 488 aa9.83□□□□□ -0.84
TRIM55-201ENST00000276573 AGAP3Q96P47 875 aa9.83□□□□□ -0.84
TRIM55-201ENST00000276573 ELAC2Q9BQ52 826 aaKnown RBP9.83□□□□□ -0.84
TRIM55-201ENST00000276573 GORASP1Q9BQQ3 440 aa9.83□□□□□ -0.84
TRIM55-201ENST00000276573 TRIM56Q9BRZ2 755 aaKnown RBP9.83□□□□□ -0.84
TRIM55-201ENST00000276573 TTPALQ9BTX7 342 aa9.83□□□□□ -0.84
TRIM55-201ENST00000276573 PPP1R12CQ9BZL4 782 aa9.83□□□□□ -0.84
TRIM55-201ENST00000276573 NSRP1Q9H0G5 558 aaKnown RBP9.83□□□□□ -0.84
TRIM55-201ENST00000276573 CRISPLD1Q9H336 500 aa9.83□□□□□ -0.84
TRIM55-201ENST00000276573 CATSPERBQ9H7T0 1116 aa9.83□□□□□ -0.84
TRIM55-201ENST00000276573 COMMD8Q9NX08 183 aa9.83□□□□□ -0.84
TRIM55-201ENST00000276573 CLIC5Q9NZA1 410 aa9.83□□□□□ -0.84
TRIM55-201ENST00000276573 HS3ST4Q9Y661 456 aa9.83□□□□□ -0.84
TRIM55-201ENST00000276573 TET1Q8NFU7 2136 aa9.83□□□□□ -0.84
TRIM55-201ENST00000276573 SOAT2O75908 522 aa9.83□□□□□ -0.84
TRIM55-201ENST00000276573 FAM155BO75949 473 aa9.83□□□□□ -0.84
TRIM55-201ENST00000276573 ALDH1A2O94788 518 aa9.83□□□□□ -0.84
TRIM55-201ENST00000276573 SUN1O94901 812 aa9.83□□□□□ -0.84
TRIM55-201ENST00000276573 ZWINTO95229 277 aa9.83□□□□□ -0.84
TRIM55-201ENST00000276573 AP2A1O95782 977 aa9.83□□□□□ -0.84
TRIM55-201ENST00000276573 SNRPAP09012 282 aaKnown RBP9.83□□□□□ -0.84
TRIM55-201ENST00000276573 MGAT1P26572 445 aa9.83□□□□□ -0.84
TRIM55-201ENST00000276573 PSEN1P49768 467 aa9.83□□□□□ -0.84
TRIM55-201ENST00000276573 TBX4P57082 545 aa9.83□□□□□ -0.84
TRIM55-201ENST00000276573 CORO7P57737 925 aa9.83□□□□□ -0.84
TRIM55-201ENST00000276573 SESN2P58004 480 aaPredicted RBP9.83□□□□□ -0.84
TRIM55-201ENST00000276573 SLC18A2Q05940 514 aa9.83□□□□□ -0.84
TRIM55-201ENST00000276573 IFT88Q13099 833 aa9.83□□□□□ -0.84
TRIM55-201ENST00000276573 ZBTB17Q13105 803 aa9.83□□□□□ -0.84
TRIM55-201ENST00000276573 LGSNQ5TDP6 509 aa9.83□□□□□ -0.84
TRIM55-201ENST00000276573 RASIP1Q5U651 963 aa9.83□□□□□ -0.84
TRIM55-201ENST00000276573 KCTD11Q693B1 232 aa9.83□□□□□ -0.84
TRIM55-201ENST00000276573 ITPRIPL1Q6GPH6 555 aa9.83□□□□□ -0.84
TRIM55-201ENST00000276573 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.83□□□□□ -0.84
TRIM55-201ENST00000276573 SH2D5Q6ZV89 423 aa9.83□□□□□ -0.84
TRIM55-201ENST00000276573 TMEM173Q86WV6 379 aaPredicted RBP9.83□□□□□ -0.84
TRIM55-201ENST00000276573 CCDC197Q8NCU1 140 aa9.83□□□□□ -0.84
TRIM55-201ENST00000276573 C2orf15Q8WU43 125 aaKnown RBP9.83□□□□□ -0.84
TRIM55-201ENST00000276573 FBXO32Q969P5 355 aa9.83□□□□□ -0.84
TRIM55-201ENST00000276573 OXNAD1Q96HP4 312 aaPredicted RBP9.83□□□□□ -0.84
TRIM55-201ENST00000276573 CABS1Q96KC9 395 aa9.83□□□□□ -0.84
TRIM55-201ENST00000276573 TGS1Q96RS0 853 aaKnown RBP9.83□□□□□ -0.84
TRIM55-201ENST00000276573 PAIP2Q9BPZ3 127 aaKnown RBP9.83□□□□□ -0.84
TRIM55-201ENST00000276573 NAT9Q9BTE0 207 aa9.83□□□□□ -0.84
TRIM55-201ENST00000276573 SLC39A8Q9C0K1 460 aa9.83□□□□□ -0.84
TRIM55-201ENST00000276573 GBA3Q9H227 469 aa9.83□□□□□ -0.84
TRIM55-201ENST00000276573 ERI2A8K979 691 aaKnown RBP9.82□□□□□ -0.84
TRIM55-201ENST00000276573 WASH4PA8MWX3 477 aa9.82□□□□□ -0.84
TRIM55-201ENST00000276573 ANKRD65E5RJM6 399 aa9.82□□□□□ -0.84
TRIM55-201ENST00000276573 E9PAM4 449 aa9.82□□□□□ -0.84
TRIM55-201ENST00000276573 GOLGA8RI6L899 631 aa9.82□□□□□ -0.84
TRIM55-201ENST00000276573 UGT1A9O60656 530 aa9.82□□□□□ -0.84
TRIM55-201ENST00000276573 UPP2O95045 317 aa9.82□□□□□ -0.84
TRIM55-201ENST00000276573 EFEMP2O95967 443 aa9.82□□□□□ -0.84
TRIM55-201ENST00000276573 MOCS2O96007 188 aaPredicted RBP9.82□□□□□ -0.84
TRIM55-201ENST00000276573 NFKB1P19838 968 aa9.82□□□□□ -0.84
TRIM55-201ENST00000276573 RPL10AP62906 217 aaKnown RBP9.82□□□□□ -0.84
TRIM55-201ENST00000276573 CRADDP78560 199 aa9.82□□□□□ -0.84
TRIM55-201ENST00000276573 EFEMP1Q12805 493 aa9.82□□□□□ -0.84
TRIM55-201ENST00000276573 TAF10Q12962 218 aa9.82□□□□□ -0.84
TRIM55-201ENST00000276573 DUSP4Q13115 394 aa9.82□□□□□ -0.84
TRIM55-201ENST00000276573 MGAT5BQ3V5L5 792 aa9.82□□□□□ -0.84
TRIM55-201ENST00000276573 AFMIDQ63HM1 303 aa9.82□□□□□ -0.84
TRIM55-201ENST00000276573 PRSS55Q6UWB4 352 aaPredicted RBP9.82□□□□□ -0.84
TRIM55-201ENST00000276573 YTHDF3Q7Z739 585 aaKnown RBP9.82□□□□□ -0.84
TRIM55-201ENST00000276573 LRRC43Q8N309 656 aa9.82□□□□□ -0.84
TRIM55-201ENST00000276573 CNTD1Q8N815 330 aa9.82□□□□□ -0.84
TRIM55-201ENST00000276573 TTC17Q96AE7 1141 aa9.82□□□□□ -0.84
TRIM55-201ENST00000276573 SERAC1Q96JX3 654 aa9.82□□□□□ -0.84
TRIM55-201ENST00000276573 KLF6Q99612 283 aaPredicted RBP9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms