RNA–Protein interactions for RNA: ENST00000267996.11

TPM1-201, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-201ENST00000267996 IL21Q9HBE4 155 aa16.81■□□□□ 0.28
TPM1-201ENST00000267996 LRRC4CQ9HCJ2 640 aa16.81■□□□□ 0.28
TPM1-201ENST00000267996 IGSF9Q9P2J2 1179 aa16.81■□□□□ 0.28
TPM1-201ENST00000267996 VANGL2Q9ULK5 521 aa16.81■□□□□ 0.28
TPM1-201ENST00000267996 C5orf67F2Z3F1 127 aa16.8■□□□□ 0.28
TPM1-201ENST00000267996 TCEA3O75764 348 aa16.8■□□□□ 0.28
TPM1-201ENST00000267996 HMBSP08397 361 aa16.8■□□□□ 0.28
TPM1-201ENST00000267996 PTPN3P26045 913 aa16.8■□□□□ 0.28
TPM1-201ENST00000267996 KCNQ1P51787 676 aa16.8■□□□□ 0.28
TPM1-201ENST00000267996 UBE3AQ05086 875 aa16.8■□□□□ 0.28
TPM1-201ENST00000267996 PDIA2Q13087 525 aaKnown RBP16.8■□□□□ 0.28
TPM1-201ENST00000267996 FASTKD3Q14CZ7 662 aaKnown RBP16.8■□□□□ 0.28
TPM1-201ENST00000267996 PARP6Q2NL67 630 aa16.8■□□□□ 0.28
TPM1-201ENST00000267996 C5orf22Q49AR2 442 aa16.8■□□□□ 0.28
TPM1-201ENST00000267996 FAXCQ5TGI0 409 aa16.8■□□□□ 0.28
TPM1-201ENST00000267996 AGBL2Q5U5Z8 902 aa16.8■□□□□ 0.28
TPM1-201ENST00000267996 NADSYN1Q6IA69 706 aa16.8■□□□□ 0.28
TPM1-201ENST00000267996 FBXL22Q6P050 247 aa16.8■□□□□ 0.28
TPM1-201ENST00000267996 LRRC49Q8IUZ0 686 aa16.8■□□□□ 0.28
TPM1-201ENST00000267996 CCDC13Q8IYE1 715 aa16.8■□□□□ 0.28
TPM1-201ENST00000267996 UMODL1-AS1Q8N2C9 162 aa16.8■□□□□ 0.28
TPM1-201ENST00000267996 MRPL43Q8N983 215 aaKnown RBP16.8■□□□□ 0.28
TPM1-201ENST00000267996 AZIN2Q96A70 460 aa16.8■□□□□ 0.28
TPM1-201ENST00000267996 CELF6Q96J87 481 aaKnown RBP16.8■□□□□ 0.28
TPM1-201ENST00000267996 VAT1Q99536 393 aa16.8■□□□□ 0.28
TPM1-201ENST00000267996 ROPN1BQ9BZX4 212 aaPredicted RBP16.8■□□□□ 0.28
TPM1-201ENST00000267996 ROPN1Q9HAT0 212 aaPredicted RBP16.8■□□□□ 0.28
TPM1-201ENST00000267996 ZNF334Q9HCZ1 680 aaPredicted RBP16.8■□□□□ 0.28
TPM1-201ENST00000267996 NDFIP2Q9NV92 336 aa16.8■□□□□ 0.28
TPM1-201ENST00000267996 TMEM248Q9NWD8 314 aa16.8■□□□□ 0.28
TPM1-201ENST00000267996 DONSONQ9NYP3 566 aa16.8■□□□□ 0.28
TPM1-201ENST00000267996 MPP6Q9NZW5 540 aa16.8■□□□□ 0.28
TPM1-201ENST00000267996 ZNF212Q9UDV6 495 aa16.8■□□□□ 0.28
TPM1-201ENST00000267996 GOLGA6L10A6NI86 522 aa16.79■□□□□ 0.28
TPM1-201ENST00000267996 KCNK1O00180 336 aa16.79■□□□□ 0.28
TPM1-201ENST00000267996 CCNCP24863 283 aa16.79■□□□□ 0.28
TPM1-201ENST00000267996 CDK16Q00536 496 aa16.79■□□□□ 0.28
TPM1-201ENST00000267996 KRT71Q3SY84 523 aa16.79■□□□□ 0.28
TPM1-201ENST00000267996 RAP1GAP2Q684P5 730 aa16.79■□□□□ 0.28
TPM1-201ENST00000267996 CCDC149Q6ZUS6 474 aa16.79■□□□□ 0.28
TPM1-201ENST00000267996 PLD4Q96BZ4 506 aa16.79■□□□□ 0.28
TPM1-201ENST00000267996 ATP6V1G3Q96LB4 118 aa16.79■□□□□ 0.28
TPM1-201ENST00000267996 SERPINB12Q96P63 405 aa16.79■□□□□ 0.28
TPM1-201ENST00000267996 TCF25Q9BQ70 676 aa16.79■□□□□ 0.28
TPM1-201ENST00000267996 WDR83Q9BRX9 315 aaKnown RBP16.79■□□□□ 0.28
TPM1-201ENST00000267996 KLF16Q9BXK1 252 aaPredicted RBP16.79■□□□□ 0.28
TPM1-201ENST00000267996 EMILIN2Q9BXX0 1053 aa16.79■□□□□ 0.28
TPM1-201ENST00000267996 SLC39A8Q9C0K1 460 aa16.79■□□□□ 0.28
TPM1-201ENST00000267996 NOL6Q9H6R4 1146 aaKnown RBP16.79■□□□□ 0.28
TPM1-201ENST00000267996 ALG13Q9NP73 1137 aaKnown RBP16.79■□□□□ 0.28
TPM1-201ENST00000267996 EIF2B3Q9NR50 452 aaKnown RBP16.79■□□□□ 0.28
TPM1-201ENST00000267996 VPS18Q9P253 973 aa16.79■□□□□ 0.28
TPM1-201ENST00000267996 TRHDEQ9UKU6 1024 aa16.79■□□□□ 0.28
TPM1-201ENST00000267996 CLUHO75153 1309 aa16.79■□□□□ 0.28
TPM1-201ENST00000267996 MYO18AQ92614 2054 aaKnown RBP16.79■□□□□ 0.28
TPM1-201ENST00000267996 GOLGA6CA6NDK9 693 aa16.78■□□□□ 0.28
TPM1-201ENST00000267996 C2orf71A6NGG8 1288 aa16.78■□□□□ 0.28
TPM1-201ENST00000267996 HMGB1P1B2RPK0 211 aaPredicted RBP16.78■□□□□ 0.28
TPM1-201ENST00000267996 ACSL4O60488 711 aa16.78■□□□□ 0.28
TPM1-201ENST00000267996 APRTP07741 180 aa16.78■□□□□ 0.28
TPM1-201ENST00000267996 SPATA31D3P0C874 917 aa16.78■□□□□ 0.28
TPM1-201ENST00000267996 GOLGA6DP0CG33 693 aa16.78■□□□□ 0.28
TPM1-201ENST00000267996 TSHRP16473 764 aa16.78■□□□□ 0.28
TPM1-201ENST00000267996 DNAJB1P25685 340 aa16.78■□□□□ 0.28
TPM1-201ENST00000267996 MAGEA3P43357 314 aa16.78■□□□□ 0.28
TPM1-201ENST00000267996 IRAK1P51617 712 aa16.78■□□□□ 0.28
TPM1-201ENST00000267996 NDST2P52849 883 aa16.78■□□□□ 0.28
TPM1-201ENST00000267996 PABPC1LQ4VXU2 614 aaKnown RBP16.78■□□□□ 0.28
TPM1-201ENST00000267996 SPATA31D4Q6ZUB0 917 aa16.78■□□□□ 0.28
TPM1-201ENST00000267996 CAND1Q86VP6 1230 aaKnown RBP16.78■□□□□ 0.28
TPM1-201ENST00000267996 ZBED8Q8IZ13 594 aa16.78■□□□□ 0.28
TPM1-201ENST00000267996 UHMK1Q8TAS1 419 aaKnown RBP16.78■□□□□ 0.28
TPM1-201ENST00000267996 DEPDC1BQ8WUY9 529 aa16.78■□□□□ 0.28
TPM1-201ENST00000267996 IGSF8Q969P0 613 aa16.78■□□□□ 0.28
TPM1-201ENST00000267996 LRRC3Q9BY71 257 aa16.78■□□□□ 0.28
TPM1-201ENST00000267996 NACA2Q9H009 215 aa16.78■□□□□ 0.28
TPM1-201ENST00000267996 RNF38Q9H0F5 515 aa16.78■□□□□ 0.28
TPM1-201ENST00000267996 GOLGA6AQ9NYA3 693 aa16.78■□□□□ 0.28
TPM1-201ENST00000267996 SEPT10Q9P0V9 454 aa16.78■□□□□ 0.28
TPM1-201ENST00000267996 C2orf78A6NCI8 922 aa16.78■□□□□ 0.28
TPM1-201ENST00000267996 MAFKO60675 156 aa16.78■□□□□ 0.28
TPM1-201ENST00000267996 BANF1O75531 89 aa16.78■□□□□ 0.28
TPM1-201ENST00000267996 STC2O76061 302 aa16.78■□□□□ 0.28
TPM1-201ENST00000267996 C1RP00736 705 aa16.78■□□□□ 0.28
TPM1-201ENST00000267996 RB1P06400 928 aa16.78■□□□□ 0.28
TPM1-201ENST00000267996 TACR2P21452 398 aa16.78■□□□□ 0.28
TPM1-201ENST00000267996 TEX44Q53QW1 395 aa16.78■□□□□ 0.28
TPM1-201ENST00000267996 ALFQ53S48 1182 aa16.78■□□□□ 0.28
TPM1-201ENST00000267996 ZNF534Q76KX8 674 aa16.78■□□□□ 0.28
TPM1-201ENST00000267996 KREMEN2Q8NCW0 462 aa16.78■□□□□ 0.28
TPM1-201ENST00000267996 POF1BQ8WVV4 589 aa16.78■□□□□ 0.28
TPM1-201ENST00000267996 FATE1Q969F0 183 aa16.78■□□□□ 0.28
TPM1-201ENST00000267996 PGM2Q96G03 612 aa16.78■□□□□ 0.28
TPM1-201ENST00000267996 RETREG1Q9H6L5 497 aa16.78■□□□□ 0.28
TPM1-201ENST00000267996 TEX264Q9Y6I9 313 aa16.78■□□□□ 0.28
TPM1-201ENST00000267996 HIDE1A8MVS5 230 aa16.77■□□□□ 0.28
TPM1-201ENST00000267996 CNTN5O94779 1100 aa16.77■□□□□ 0.28
TPM1-201ENST00000267996 ARHGEF15O94989 841 aa16.77■□□□□ 0.28
TPM1-201ENST00000267996 OLFM2O95897 454 aa16.77■□□□□ 0.28
TPM1-201ENST00000267996 KLKB1P03952 638 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms