RNA–Protein interactions for RNA: ENST00000264555.9

PHRF1-201, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,523 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-201ENST00000264555 CBX6O95503 412 aa17.07■□□□□ 0.32
PHRF1-201ENST00000264555 NOMO1Q15155 1222 aa17.07■□□□□ 0.32
PHRF1-201ENST00000264555 ANKRD23Q86SG2 305 aa17.07■□□□□ 0.32
PHRF1-201ENST00000264555 ITIH5Q86UX2 942 aa17.07■□□□□ 0.32
PHRF1-201ENST00000264555 ZNF398Q8TD17 642 aa17.07■□□□□ 0.32
PHRF1-201ENST00000264555 FAM162AQ96A26 154 aa17.07■□□□□ 0.32
PHRF1-201ENST00000264555 CERS2Q96G23 380 aa17.07■□□□□ 0.32
PHRF1-201ENST00000264555 CAMKK2Q96RR4 588 aa17.07■□□□□ 0.32
PHRF1-201ENST00000264555 MMADHCQ9H3L0 296 aaPredicted RBP17.07■□□□□ 0.32
PHRF1-201ENST00000264555 ATXN3LQ9H3M9 355 aa17.07■□□□□ 0.32
PHRF1-201ENST00000264555 ATP13A1Q9HD20 1204 aa17.07■□□□□ 0.32
PHRF1-201ENST00000264555 CNGB3Q9NQW8 809 aa17.07■□□□□ 0.32
PHRF1-201ENST00000264555 DLGAP2Q9P1A6 1054 aa17.07■□□□□ 0.32
PHRF1-201ENST00000264555 ADAM28Q9UKQ2 775 aa17.07■□□□□ 0.32
PHRF1-201ENST00000264555 RAD54BQ9Y620 910 aa17.07■□□□□ 0.32
PHRF1-201ENST00000264555 DHX15O43143 795 aaKnown RBP17.07■□□□□ 0.32
PHRF1-201ENST00000264555 HOXB8P17481 243 aaPredicted RBP17.07■□□□□ 0.32
PHRF1-201ENST00000264555 CDH2P19022 906 aaPredicted RBP17.07■□□□□ 0.32
PHRF1-201ENST00000264555 TUFMP49411 452 aaKnown RBP17.07■□□□□ 0.32
PHRF1-201ENST00000264555 NUMBP49757 651 aa17.07■□□□□ 0.32
PHRF1-201ENST00000264555 MBTD1Q05BQ5 628 aa17.07■□□□□ 0.32
PHRF1-201ENST00000264555 FAM110CQ1W6H9 321 aa17.07■□□□□ 0.32
PHRF1-201ENST00000264555 LRRC23Q53EV4 343 aaPredicted RBP17.07■□□□□ 0.32
PHRF1-201ENST00000264555 TRABD2AQ86V40 505 aa17.07■□□□□ 0.32
PHRF1-201ENST00000264555 NKD2Q969F2 451 aaPredicted RBP17.07■□□□□ 0.32
PHRF1-201ENST00000264555 RGS18Q9NS28 235 aa17.07■□□□□ 0.32
PHRF1-201ENST00000264555 ENDOD1O94919 500 aa17.07■□□□□ 0.32
PHRF1-201ENST00000264555 AIF1P55008 147 aa17.07■□□□□ 0.32
PHRF1-201ENST00000264555 TMED1Q13445 227 aa17.07■□□□□ 0.32
PHRF1-201ENST00000264555 TTC27Q6P3X3 843 aa17.07■□□□□ 0.32
PHRF1-201ENST00000264555 STRADAQ7RTN6 431 aa17.07■□□□□ 0.32
PHRF1-201ENST00000264555 DEFB107AQ8IZN7 70 aa17.07■□□□□ 0.32
PHRF1-201ENST00000264555 VPS37AQ8NEZ2 397 aa17.07■□□□□ 0.32
PHRF1-201ENST00000264555 LPCAT1Q8NF37 534 aa17.07■□□□□ 0.32
PHRF1-201ENST00000264555 ACMSDQ8TDX5 336 aa17.07■□□□□ 0.32
PHRF1-201ENST00000264555 ECSITQ9BQ95 431 aa17.07■□□□□ 0.32
PHRF1-201ENST00000264555 NEUROG2Q9H2A3 272 aa17.07■□□□□ 0.32
PHRF1-201ENST00000264555 IPPQ9Y573 584 aa17.07■□□□□ 0.32
PHRF1-201ENST00000264555 LRCH4O75427 683 aa17.07■□□□□ 0.32
PHRF1-201ENST00000264555 PSMA4P25789 261 aaKnown RBP17.07■□□□□ 0.32
PHRF1-201ENST00000264555 CSE1LP55060 971 aaKnown RBP17.07■□□□□ 0.32
PHRF1-201ENST00000264555 TBL3Q12788 808 aaKnown RBP17.07■□□□□ 0.32
PHRF1-201ENST00000264555 SLC25A52Q3SY17 297 aa17.07■□□□□ 0.32
PHRF1-201ENST00000264555 RETSATQ6NUM9 610 aa17.07■□□□□ 0.32
PHRF1-201ENST00000264555 ADGRA3Q8IWK6 1321 aa17.07■□□□□ 0.32
PHRF1-201ENST00000264555 USP6NLQ92738 828 aa17.07■□□□□ 0.32
PHRF1-201ENST00000264555 EMILIN2Q9BXX0 1053 aa17.07■□□□□ 0.32
PHRF1-201ENST00000264555 BCAS3Q9H6U6 928 aa17.07■□□□□ 0.32
PHRF1-201ENST00000264555 SLC24A3Q9HC58 644 aa17.07■□□□□ 0.32
PHRF1-201ENST00000264555 AJAP1Q9UKB5 411 aaPredicted RBP17.07■□□□□ 0.32
PHRF1-201ENST00000264555 CLUHO75153 1309 aa17.06■□□□□ 0.32
PHRF1-201ENST00000264555 C16orf96A6NNT2 1141 aa17.06■□□□□ 0.32
PHRF1-201ENST00000264555 PTK2BQ14289 1009 aa17.06■□□□□ 0.32
PHRF1-201ENST00000264555 KRT72Q14CN4 511 aa17.06■□□□□ 0.32
PHRF1-201ENST00000264555 LGI2Q8N0V4 545 aa17.06■□□□□ 0.32
PHRF1-201ENST00000264555 CYGBQ8WWM9 190 aa17.06■□□□□ 0.32
PHRF1-201ENST00000264555 ABTB1Q969K4 478 aaPredicted RBP17.06■□□□□ 0.32
PHRF1-201ENST00000264555 TEX12Q9BXU0 123 aa17.06■□□□□ 0.32
PHRF1-201ENST00000264555 MARCH2Q9P0N8 246 aa17.06■□□□□ 0.32
PHRF1-201ENST00000264555 EVPLLA8MZ36 301 aa17.06■□□□□ 0.32
PHRF1-201ENST00000264555 GOLGA8TH3BQL2 631 aa17.06■□□□□ 0.32
PHRF1-201ENST00000264555 PGK1P00558 417 aa17.06■□□□□ 0.32
PHRF1-201ENST00000264555 CDKN2BP42772 138 aa17.06■□□□□ 0.32
PHRF1-201ENST00000264555 KCTD19Q17RG1 926 aaPredicted RBP17.06■□□□□ 0.32
PHRF1-201ENST00000264555 LRRC49Q8IUZ0 686 aa17.06■□□□□ 0.32
PHRF1-201ENST00000264555 TBC1D19Q8N5T2 526 aa17.06■□□□□ 0.32
PHRF1-201ENST00000264555 MYLPFQ96A32 169 aa17.06■□□□□ 0.32
PHRF1-201ENST00000264555 APOBEC3GQ9HC16 384 aaKnown RBP17.06■□□□□ 0.32
PHRF1-201ENST00000264555 SLC25A13Q9UJS0 675 aa17.06■□□□□ 0.32
PHRF1-201ENST00000264555 STXBP5LQ9Y2K9 1186 aa17.06■□□□□ 0.32
PHRF1-201ENST00000264555 KIF1CO43896 1103 aaKnown RBP17.06■□□□□ 0.32
PHRF1-201ENST00000264555 SOX11P35716 441 aa17.06■□□□□ 0.32
PHRF1-201ENST00000264555 CRADDP78560 199 aa17.06■□□□□ 0.32
PHRF1-201ENST00000264555 PHF21BQ96EK2 531 aa17.06■□□□□ 0.32
PHRF1-201ENST00000264555 NAF1Q96HR8 494 aaKnown RBP17.06■□□□□ 0.32
PHRF1-201ENST00000264555 LGMNQ99538 433 aa17.06■□□□□ 0.32
PHRF1-201ENST00000264555 UNKQ9C0B0 810 aaKnown RBP17.06■□□□□ 0.32
PHRF1-201ENST00000264555 ADNPQ9H2P0 1102 aa17.06■□□□□ 0.32
PHRF1-201ENST00000264555 PDP2Q9P2J9 529 aa17.06■□□□□ 0.32
PHRF1-201ENST00000264555 TUBGCP4Q9UGJ1 667 aa17.06■□□□□ 0.32
PHRF1-201ENST00000264555 C5P01031 1676 aa17.06■□□□□ 0.32
PHRF1-201ENST00000264555 A0A087X1B8 175 aa17.06■□□□□ 0.32
PHRF1-201ENST00000264555 TCRBV9S1A1TA0A576 114 aa17.06■□□□□ 0.32
PHRF1-201ENST00000264555 GPR25O00155 361 aa17.06■□□□□ 0.32
PHRF1-201ENST00000264555 SERPINH1P50454 418 aaKnown RBP17.06■□□□□ 0.32
PHRF1-201ENST00000264555 C16orf46Q6P387 395 aa17.06■□□□□ 0.32
PHRF1-201ENST00000264555 PRCCQ92733 491 aaPredicted RBP17.06■□□□□ 0.32
PHRF1-201ENST00000264555 FAXDC2Q96IV6 333 aa17.06■□□□□ 0.32
PHRF1-201ENST00000264555 CXorf56Q9H5V9 222 aa17.06■□□□□ 0.32
PHRF1-201ENST00000264555 CDHR5Q9HBB8 845 aa17.06■□□□□ 0.32
PHRF1-201ENST00000264555 LRRC4CQ9HCJ2 640 aa17.06■□□□□ 0.32
PHRF1-201ENST00000264555 NMRK2Q9NPI5 230 aa17.06■□□□□ 0.32
PHRF1-201ENST00000264555 ARMCX1Q9P291 453 aa17.06■□□□□ 0.32
PHRF1-201ENST00000264555 A0A0G2JLL6 359 aaPredicted RBP17.05■□□□□ 0.32
PHRF1-201ENST00000264555 SMIM28A0A1B0GU29 152 aa17.05■□□□□ 0.32
PHRF1-201ENST00000264555 TSPAN1O60635 241 aa17.05■□□□□ 0.32
PHRF1-201ENST00000264555 HIRAP54198 1017 aaPredicted RBP17.05■□□□□ 0.32
PHRF1-201ENST00000264555 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.05■□□□□ 0.32
PHRF1-201ENST00000264555 PRRT2Q7Z6L0 340 aaPredicted RBP17.05■□□□□ 0.32
PHRF1-201ENST00000264555 PRPF18Q99633 342 aaKnown RBP17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms