RNA–Protein interactions for RNA: ENST00000263309.7

CLNS1A-201, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 3 BASIC

Gene CLNS1A, Length 1,172 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-201ENST00000263309 HCAR3P49019 387 aa12.92□□□□□ -0.34
CLNS1A-201ENST00000263309 DGKEP52429 567 aa12.92□□□□□ -0.34
CLNS1A-201ENST00000263309 SEC13P55735 322 aa12.92□□□□□ -0.34
CLNS1A-201ENST00000263309 NHLH1Q02575 133 aa12.92□□□□□ -0.34
CLNS1A-201ENST00000263309 TCEAL1Q15170 157 aa12.92□□□□□ -0.34
CLNS1A-201ENST00000263309 FNDC3BQ53EP0 1204 aaKnown RBP12.92□□□□□ -0.34
CLNS1A-201ENST00000263309 FAM133BQ5BKY9 247 aaKnown RBP12.92□□□□□ -0.34
CLNS1A-201ENST00000263309 C1orf210Q8IVY1 113 aa12.92□□□□□ -0.34
CLNS1A-201ENST00000263309 PGBD3Q8N328 593 aa12.92□□□□□ -0.34
CLNS1A-201ENST00000263309 BBS5Q8N3I7 341 aa12.92□□□□□ -0.34
CLNS1A-201ENST00000263309 UBL4BQ8N7F7 174 aa12.92□□□□□ -0.34
CLNS1A-201ENST00000263309 DTWD2Q8NBA8 298 aa12.92□□□□□ -0.34
CLNS1A-201ENST00000263309 TRIM44Q96DX7 344 aaPredicted RBP12.92□□□□□ -0.34
CLNS1A-201ENST00000263309 CHFRQ96EP1 664 aa12.92□□□□□ -0.34
CLNS1A-201ENST00000263309 ZNF830Q96NB3 372 aaPredicted RBP12.92□□□□□ -0.34
CLNS1A-201ENST00000263309 SPON2Q9BUD6 331 aa12.92□□□□□ -0.34
CLNS1A-201ENST00000263309 FAM126AQ9BYI3 521 aaPredicted RBP12.92□□□□□ -0.34
CLNS1A-201ENST00000263309 BCCIPQ9P287 314 aaKnown RBP eCLIP12.92□□□□□ -0.34
CLNS1A-201ENST00000263309 FBXO10Q9UK96 956 aa12.92□□□□□ -0.34
CLNS1A-201ENST00000263309 STARD13Q9Y3M8 1113 aa12.92□□□□□ -0.34
CLNS1A-201ENST00000263309 MYO16Q9Y6X6 1858 aa12.92□□□□□ -0.34
CLNS1A-201ENST00000263309 ZNF638Q14966 1978 aaKnown RBP12.91□□□□□ -0.34
CLNS1A-201ENST00000263309 ILVBLA1L0T0 632 aa12.91□□□□□ -0.34
CLNS1A-201ENST00000263309 ZSCAN5CA6NGD5 496 aaPredicted RBP12.91□□□□□ -0.34
CLNS1A-201ENST00000263309 OTOL1A6NHN0 477 aaPredicted RBP12.91□□□□□ -0.34
CLNS1A-201ENST00000263309 BTNL10A8MVZ5 291 aa12.91□□□□□ -0.34
CLNS1A-201ENST00000263309 CHURC1-FNTBB4DL54 471 aa12.91□□□□□ -0.34
CLNS1A-201ENST00000263309 RAMP2O60895 175 aa12.91□□□□□ -0.34
CLNS1A-201ENST00000263309 RNF40O75150 1001 aa12.91□□□□□ -0.34
CLNS1A-201ENST00000263309 MTA2O94776 668 aa12.91□□□□□ -0.34
CLNS1A-201ENST00000263309 EGFP01133 1207 aa12.91□□□□□ -0.34
CLNS1A-201ENST00000263309 SRPRAP08240 638 aaKnown RBP12.91□□□□□ -0.34
CLNS1A-201ENST00000263309 DLDP09622 509 aaKnown RBP12.91□□□□□ -0.34
CLNS1A-201ENST00000263309 FECHP22830 423 aa12.91□□□□□ -0.34
CLNS1A-201ENST00000263309 TARSP26639 723 aaKnown RBP12.91□□□□□ -0.34
CLNS1A-201ENST00000263309 HOXD9P28356 352 aaPredicted RBP12.91□□□□□ -0.34
CLNS1A-201ENST00000263309 SLC6A4P31645 630 aa12.91□□□□□ -0.34
CLNS1A-201ENST00000263309 YBEYP58557 167 aaPredicted RBP12.91□□□□□ -0.34
CLNS1A-201ENST00000263309 RPS24P62847 133 aaKnown RBP12.91□□□□□ -0.34
CLNS1A-201ENST00000263309 PITX1P78337 314 aaPredicted RBP12.91□□□□□ -0.34
CLNS1A-201ENST00000263309 ECT2LQ008S8 904 aa12.91□□□□□ -0.34
CLNS1A-201ENST00000263309 POLD3Q15054 466 aaPredicted RBP12.91□□□□□ -0.34
CLNS1A-201ENST00000263309 ACCSLQ4AC99 568 aa12.91□□□□□ -0.34
CLNS1A-201ENST00000263309 SH3PXD2AQ5TCZ1 1133 aa12.91□□□□□ -0.34
CLNS1A-201ENST00000263309 MBLAC2Q68D91 279 aa12.91□□□□□ -0.34
CLNS1A-201ENST00000263309 NADSYN1Q6IA69 706 aa12.91□□□□□ -0.34
CLNS1A-201ENST00000263309 FSTL4Q6MZW2 842 aa12.91□□□□□ -0.34
CLNS1A-201ENST00000263309 SERPINA13PQ6UXR4 307 aa12.91□□□□□ -0.34
CLNS1A-201ENST00000263309 MAMSTRQ6ZN01 415 aa12.91□□□□□ -0.34
CLNS1A-201ENST00000263309 BNIPLQ7Z465 357 aa12.91□□□□□ -0.34
CLNS1A-201ENST00000263309 POLNQ7Z5Q5 900 aa12.91□□□□□ -0.34
CLNS1A-201ENST00000263309 DSG4Q86SJ6 1040 aa12.91□□□□□ -0.34
CLNS1A-201ENST00000263309 ETFBKMTQ8IXQ9 262 aa12.91□□□□□ -0.34
CLNS1A-201ENST00000263309 KDM1BQ8NB78 822 aa12.91□□□□□ -0.34
CLNS1A-201ENST00000263309 RPLP0P6Q8NHW5 317 aa12.91□□□□□ -0.34
CLNS1A-201ENST00000263309 RIN3Q8TB24 985 aa12.91□□□□□ -0.34
CLNS1A-201ENST00000263309 ATRIPQ8WXE1 791 aa12.91□□□□□ -0.34
CLNS1A-201ENST00000263309 WBP2Q969T9 261 aa12.91□□□□□ -0.34
CLNS1A-201ENST00000263309 CALN1Q9BXU9 219 aa12.91□□□□□ -0.34
CLNS1A-201ENST00000263309 MAGEH1Q9H213 219 aa12.91□□□□□ -0.34
CLNS1A-201ENST00000263309 CHRDQ9H2X0 955 aa12.91□□□□□ -0.34
CLNS1A-201ENST00000263309 FBRSQ9HAH7 460 aa12.91□□□□□ -0.34
CLNS1A-201ENST00000263309 RCOR3Q9P2K3 495 aaPredicted RBP12.91□□□□□ -0.34
CLNS1A-201ENST00000263309 NOTCH4Q99466 2003 aa12.91□□□□□ -0.34
CLNS1A-201ENST00000263309 ARHGAP42A6NI28 874 aa12.9□□□□□ -0.34
CLNS1A-201ENST00000263309 LRCH4O75427 683 aa12.9□□□□□ -0.34
CLNS1A-201ENST00000263309 ACADMP11310 421 aa12.9□□□□□ -0.34
CLNS1A-201ENST00000263309 TFE3P19532 575 aaPredicted RBP12.9□□□□□ -0.34
CLNS1A-201ENST00000263309 HADHBP55084 474 aaKnown RBP12.9□□□□□ -0.34
CLNS1A-201ENST00000263309 RAD51Q06609 339 aa12.9□□□□□ -0.34
CLNS1A-201ENST00000263309 CCINQ13939 588 aa12.9□□□□□ -0.34
CLNS1A-201ENST00000263309 C5orf22Q49AR2 442 aa12.9□□□□□ -0.34
CLNS1A-201ENST00000263309 TMCO4Q5TGY1 634 aa12.9□□□□□ -0.34
CLNS1A-201ENST00000263309 LRRC38Q5VT99 294 aa12.9□□□□□ -0.34
CLNS1A-201ENST00000263309 SYT13Q7L8C5 426 aa12.9□□□□□ -0.34
CLNS1A-201ENST00000263309 C11orf74Q86VG3 221 aa12.9□□□□□ -0.34
CLNS1A-201ENST00000263309 LRRC49Q8IUZ0 686 aa12.9□□□□□ -0.34
CLNS1A-201ENST00000263309 CCDC105Q8IYK2 499 aa12.9□□□□□ -0.34
CLNS1A-201ENST00000263309 CCDC185Q8N715 623 aa12.9□□□□□ -0.34
CLNS1A-201ENST00000263309 TSTD1Q8NFU3 115 aa12.9□□□□□ -0.34
CLNS1A-201ENST00000263309 ARHGEF26Q96DR7 871 aa12.9□□□□□ -0.34
CLNS1A-201ENST00000263309 PRMT1Q99873 361 aaKnown RBP12.9□□□□□ -0.34
CLNS1A-201ENST00000263309 PACSIN1Q9BY11 444 aa12.9□□□□□ -0.34
CLNS1A-201ENST00000263309 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.9□□□□□ -0.34
CLNS1A-201ENST00000263309 FBXO4Q9UKT5 387 aa12.9□□□□□ -0.34
CLNS1A-201ENST00000263309 AMFRQ9UKV5 643 aa12.9□□□□□ -0.34
CLNS1A-201ENST00000263309 TBC1D30Q9Y2I9 924 aa12.9□□□□□ -0.34
CLNS1A-201ENST00000263309 IGLV3-10A0A075B6K4 115 aa12.89□□□□□ -0.35
CLNS1A-201ENST00000263309 CXorf51AA0A1B0GTR3 108 aa12.89□□□□□ -0.35
CLNS1A-201ENST00000263309 GOLGA6L9A6NEM1 432 aa12.89□□□□□ -0.35
CLNS1A-201ENST00000263309 LRIG2O94898 1065 aa12.89□□□□□ -0.35
CLNS1A-201ENST00000263309 ZRANB2O95218 330 aaKnown RBP eCLIP12.89□□□□□ -0.35
CLNS1A-201ENST00000263309 KLF8O95600 359 aaPredicted RBP12.89□□□□□ -0.35
CLNS1A-201ENST00000263309 CISD3P0C7P0 127 aa12.89□□□□□ -0.35
CLNS1A-201ENST00000263309 TNNT1P13805 278 aa12.89□□□□□ -0.35
CLNS1A-201ENST00000263309 HNRNPLP14866 589 aaKnown RBP eCLIP12.89□□□□□ -0.351e-9■■■□□ 15
CLNS1A-201ENST00000263309 GJC1P36383 396 aa12.89□□□□□ -0.35
CLNS1A-201ENST00000263309 PLK1P53350 603 aa12.89□□□□□ -0.35
CLNS1A-201ENST00000263309 ATXN1P54253 815 aaKnown RBP12.89□□□□□ -0.35
CLNS1A-201ENST00000263309 CDH6P55285 790 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms