RNA–Protein interactions for RNA: ENST00000262570.9

CHCHD3-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHCHD3, Length 1,598 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-201ENST00000262570 FBRSL1Q9HCM7 1045 aaKnown RBP17.11■□□□□ 0.33
CHCHD3-201ENST00000262570 KLHL11Q9NVR0 708 aa17.11■□□□□ 0.33
CHCHD3-201ENST00000262570 TMEM248Q9NWD8 314 aa17.11■□□□□ 0.33
CHCHD3-201ENST00000262570 RCOR3Q9P2K3 495 aaPredicted RBP17.11■□□□□ 0.33
CHCHD3-201ENST00000262570 TBC1D30Q9Y2I9 924 aa17.11■□□□□ 0.33
CHCHD3-201ENST00000262570 SLC27A6Q9Y2P4 619 aa17.11■□□□□ 0.33
CHCHD3-201ENST00000262570 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.11■□□□□ 0.33
CHCHD3-201ENST00000262570 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.11■□□□□ 0.33
CHCHD3-201ENST00000262570 WASH4PA8MWX3 477 aa17.11■□□□□ 0.33
CHCHD3-201ENST00000262570 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.11■□□□□ 0.33
CHCHD3-201ENST00000262570 H0Y626 953 aa17.11■□□□□ 0.33
CHCHD3-201ENST00000262570 FGF10O15520 208 aaPredicted RBP17.11■□□□□ 0.33
CHCHD3-201ENST00000262570 CTNNA2P26232 953 aa17.11■□□□□ 0.33
CHCHD3-201ENST00000262570 HLA-FP30511 346 aa17.11■□□□□ 0.33
CHCHD3-201ENST00000262570 MARCKSL1P49006 195 aa17.11■□□□□ 0.33
CHCHD3-201ENST00000262570 PEX5P50542 639 aa17.11■□□□□ 0.33
CHCHD3-201ENST00000262570 ZNF177Q13360 481 aaPredicted RBP17.11■□□□□ 0.33
CHCHD3-201ENST00000262570 CDH18Q13634 790 aa17.11■□□□□ 0.33
CHCHD3-201ENST00000262570 DPYSL3Q14195 570 aa17.11■□□□□ 0.33
CHCHD3-201ENST00000262570 KRT81Q14533 505 aa17.11■□□□□ 0.33
CHCHD3-201ENST00000262570 CXorf57Q6NSI4 855 aaKnown RBP17.11■□□□□ 0.33
CHCHD3-201ENST00000262570 ZNF852Q6ZMS4 543 aa17.11■□□□□ 0.33
CHCHD3-201ENST00000262570 TFAP2DQ7Z6R9 452 aa17.11■□□□□ 0.33
CHCHD3-201ENST00000262570 FAM3CQ92520 227 aa17.11■□□□□ 0.33
CHCHD3-201ENST00000262570 LMLNQ96KR4 655 aa17.11■□□□□ 0.33
CHCHD3-201ENST00000262570 CSPG4P5Q96PW8 444 aa17.11■□□□□ 0.33
CHCHD3-201ENST00000262570 PNKPQ96T60 521 aa17.11■□□□□ 0.33
CHCHD3-201ENST00000262570 CATSPERBQ9H7T0 1116 aa17.11■□□□□ 0.33
CHCHD3-201ENST00000262570 PACSIN2Q9UNF0 486 aaPredicted RBP17.11■□□□□ 0.33
CHCHD3-201ENST00000262570 A0A0A0MRY4 1105 aa17.1■□□□□ 0.33
CHCHD3-201ENST00000262570 LRRD1A4D1F6 860 aa17.1■□□□□ 0.33
CHCHD3-201ENST00000262570 C3orf70A6NLC5 250 aaPredicted RBP17.1■□□□□ 0.33
CHCHD3-201ENST00000262570 MIF4GDA9UHW6 222 aaKnown RBP17.1■□□□□ 0.33
CHCHD3-201ENST00000262570 PI4K2BG5E9Z4 385 aa17.1■□□□□ 0.33
CHCHD3-201ENST00000262570 H3BRJ5 948 aa17.1■□□□□ 0.33
CHCHD3-201ENST00000262570 CD72P21854 359 aa17.1■□□□□ 0.33
CHCHD3-201ENST00000262570 DPYSQ14117 519 aa17.1■□□□□ 0.33
CHCHD3-201ENST00000262570 PON2Q15165 354 aa17.1■□□□□ 0.33
CHCHD3-201ENST00000262570 PREPLQ4J6C6 727 aaPredicted RBP17.1■□□□□ 0.33
CHCHD3-201ENST00000262570 TMEM196Q5HYL7 178 aa17.1■□□□□ 0.33
CHCHD3-201ENST00000262570 GRAMD4Q6IC98 578 aa17.1■□□□□ 0.33
CHCHD3-201ENST00000262570 TRIM67Q6ZTA4 783 aa17.1■□□□□ 0.33
CHCHD3-201ENST00000262570 SETD3Q86TU7 594 aaPredicted RBP17.1■□□□□ 0.33
CHCHD3-201ENST00000262570 VSIG1Q86XK7 387 aa17.1■□□□□ 0.33
CHCHD3-201ENST00000262570 CCDC117Q8IWD4 279 aaPredicted RBP17.1■□□□□ 0.33
CHCHD3-201ENST00000262570 SUGP1Q8IWZ8 645 aaKnown RBP17.1■□□□□ 0.33
CHCHD3-201ENST00000262570 KATNAL2Q8IYT4 538 aa17.1■□□□□ 0.33
CHCHD3-201ENST00000262570 RTL3Q8N8U3 475 aaKnown RBP17.1■□□□□ 0.33
CHCHD3-201ENST00000262570 EXOC4Q96A65 974 aa17.1■□□□□ 0.33
CHCHD3-201ENST00000262570 TRIM44Q96DX7 344 aaPredicted RBP17.1■□□□□ 0.33
CHCHD3-201ENST00000262570 HES6Q96HZ4 224 aa17.1■□□□□ 0.33
CHCHD3-201ENST00000262570 ZNF670Q9BS34 389 aa17.1■□□□□ 0.33
CHCHD3-201ENST00000262570 CALN1Q9BXU9 219 aa17.1■□□□□ 0.33
CHCHD3-201ENST00000262570 ARHGEF4Q9NR80 690 aa17.1■□□□□ 0.33
CHCHD3-201ENST00000262570 NDFIP2Q9NV92 336 aa17.1■□□□□ 0.33
CHCHD3-201ENST00000262570 DAPK3O43293 454 aa17.09■□□□□ 0.33
CHCHD3-201ENST00000262570 KAT7O95251 611 aa17.09■□□□□ 0.33
CHCHD3-201ENST00000262570 KRT1P04264 644 aa17.09■□□□□ 0.33
CHCHD3-201ENST00000262570 ERCC2P18074 760 aa17.09■□□□□ 0.33
CHCHD3-201ENST00000262570 OR1E1P30953 314 aa17.09■□□□□ 0.33
CHCHD3-201ENST00000262570 GRIA2P42262 883 aa17.09■□□□□ 0.33
CHCHD3-201ENST00000262570 MAPKAPK2P49137 400 aa17.09■□□□□ 0.33
CHCHD3-201ENST00000262570 LMAN2Q12907 356 aa17.09■□□□□ 0.33
CHCHD3-201ENST00000262570 MMRN1Q13201 1228 aa17.09■□□□□ 0.33
CHCHD3-201ENST00000262570 C6orf118Q5T5N4 469 aa17.09■□□□□ 0.33
CHCHD3-201ENST00000262570 MEI1Q5TIA1 1274 aa17.09■□□□□ 0.33
CHCHD3-201ENST00000262570 KIAA0907Q7Z7F0 614 aaPredicted RBP17.09■□□□□ 0.33
CHCHD3-201ENST00000262570 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.09■□□□□ 0.33
CHCHD3-201ENST00000262570 TERB1Q8NA31 727 aa17.09■□□□□ 0.33
CHCHD3-201ENST00000262570 OR52K2Q8NGK3 314 aa17.09■□□□□ 0.33
CHCHD3-201ENST00000262570 ALG3Q92685 438 aa17.09■□□□□ 0.33
CHCHD3-201ENST00000262570 FAF2Q96CS3 445 aa17.09■□□□□ 0.33
CHCHD3-201ENST00000262570 COL25A1Q9BXS0 654 aaPredicted RBP17.09■□□□□ 0.33
CHCHD3-201ENST00000262570 ABCB8Q9NUT2 735 aa17.09■□□□□ 0.33
CHCHD3-201ENST00000262570 KIAA1522Q9P206 1035 aaPredicted RBP17.09■□□□□ 0.33
CHCHD3-201ENST00000262570 KANSL1LA0AUZ9 987 aa17.08■□□□□ 0.32
CHCHD3-201ENST00000262570 ZNF487B1APH4 448 aa17.08■□□□□ 0.32
CHCHD3-201ENST00000262570 DDX3YO15523 660 aaKnown RBP17.08■□□□□ 0.32
CHCHD3-201ENST00000262570 ZRANB2O95218 330 aaKnown RBP eCLIP17.08■□□□□ 0.32
CHCHD3-201ENST00000262570 CD70P32970 193 aa17.08■□□□□ 0.32
CHCHD3-201ENST00000262570 OXCT1P55809 520 aa17.08■□□□□ 0.32
CHCHD3-201ENST00000262570 RWDD2BP57060 319 aa17.08■□□□□ 0.32
CHCHD3-201ENST00000262570 KDSRQ06136 332 aa17.08■□□□□ 0.32
CHCHD3-201ENST00000262570 ODF2Q5BJF6 829 aa17.08■□□□□ 0.32
CHCHD3-201ENST00000262570 ANKRD20A8PQ5CZ79 823 aa17.08■□□□□ 0.32
CHCHD3-201ENST00000262570 RCOR2Q8IZ40 523 aa17.08■□□□□ 0.32
CHCHD3-201ENST00000262570 ZNF687Q8N1G0 1237 aa17.08■□□□□ 0.32
CHCHD3-201ENST00000262570 UBL4BQ8N7F7 174 aa17.08■□□□□ 0.32
CHCHD3-201ENST00000262570 EXD1Q8NHP7 514 aa17.08■□□□□ 0.32
CHCHD3-201ENST00000262570 RNF25Q96BH1 459 aaPredicted RBP17.08■□□□□ 0.32
CHCHD3-201ENST00000262570 DONSONQ9NYP3 566 aa17.08■□□□□ 0.32
CHCHD3-201ENST00000262570 DNAI1Q9UI46 699 aa17.08■□□□□ 0.32
CHCHD3-201ENST00000262570 GGA2Q9UJY4 613 aa17.08■□□□□ 0.32
CHCHD3-201ENST00000262570 DOCK4Q8N1I0 1966 aa17.08■□□□□ 0.32
CHCHD3-201ENST00000262570 ILVBLA1L0T0 632 aa17.07■□□□□ 0.32
CHCHD3-201ENST00000262570 TBC1D3BA6NDS4 549 aa17.07■□□□□ 0.32
CHCHD3-201ENST00000262570 DCLK1O15075 740 aa17.07■□□□□ 0.32
CHCHD3-201ENST00000262570 KIF5CO60282 957 aa17.07■□□□□ 0.32
CHCHD3-201ENST00000262570 APODP05090 189 aa17.07■□□□□ 0.32
CHCHD3-201ENST00000262570 RHOCP08134 193 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms