RNA–Protein interactions for RNA: ENST00000262018.7

SGCA-201, Transcript of sarcoglycan alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCA, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-201ENST00000262018 ADGRG2Q8IZP9 1017 aa13.84□□□□□ -0.19
SGCA-201ENST00000262018 ZNF513Q8N8E2 541 aaPredicted RBP13.84□□□□□ -0.19
SGCA-201ENST00000262018 UBE2Q2Q8WVN8 375 aa13.84□□□□□ -0.19
SGCA-201ENST00000262018 ZNF653Q96CK0 615 aa13.84□□□□□ -0.19
SGCA-201ENST00000262018 VCPIP1Q96JH7 1222 aa13.84□□□□□ -0.19
SGCA-201ENST00000262018 MYRFLQ96LU7 910 aa13.84□□□□□ -0.19
SGCA-201ENST00000262018 CTTNBP2NLQ9P2B4 639 aa13.84□□□□□ -0.19
SGCA-201ENST00000262018 UVRAGQ9P2Y5 699 aa13.84□□□□□ -0.19
SGCA-201ENST00000262018 L1RE1Q9UN81 338 aa13.84□□□□□ -0.19
SGCA-201ENST00000262018 A0A0A0MRY4 1105 aa13.83□□□□□ -0.2
SGCA-201ENST00000262018 CTAGE15A4D2H0 777 aa13.83□□□□□ -0.2
SGCA-201ENST00000262018 TBC1D3BA6NDS4 549 aa13.83□□□□□ -0.2
SGCA-201ENST00000262018 E9PAM4 449 aa13.83□□□□□ -0.2
SGCA-201ENST00000262018 CES2O00748 559 aa13.83□□□□□ -0.2
SGCA-201ENST00000262018 RRP8O43159 456 aaKnown RBP13.83□□□□□ -0.2
SGCA-201ENST00000262018 BUB1BO60566 1050 aaPredicted RBP13.83□□□□□ -0.2
SGCA-201ENST00000262018 CTAGE8P0CG41 777 aa13.83□□□□□ -0.2
SGCA-201ENST00000262018 CYP2F1P24903 491 aa13.83□□□□□ -0.2
SGCA-201ENST00000262018 NSFP46459 744 aaKnown RBP13.83□□□□□ -0.2
SGCA-201ENST00000262018 ZXDBP98169 803 aa13.83□□□□□ -0.2
SGCA-201ENST00000262018 TSPY1Q01534 308 aa13.83□□□□□ -0.2
SGCA-201ENST00000262018 KCNC4Q03721 635 aa13.83□□□□□ -0.2
SGCA-201ENST00000262018 NAA30Q147X3 362 aaPredicted RBP13.83□□□□□ -0.2
SGCA-201ENST00000262018 RPS6KA1Q15418 735 aa13.83□□□□□ -0.2
SGCA-201ENST00000262018 NFE2Q16621 373 aaPredicted RBP13.83□□□□□ -0.2
SGCA-201ENST00000262018 ZNF394Q53GI3 561 aa13.83□□□□□ -0.2
SGCA-201ENST00000262018 C11orf63Q6NUN7 778 aa13.83□□□□□ -0.2
SGCA-201ENST00000262018 ZNF572Q7Z3I7 529 aaPredicted RBP13.83□□□□□ -0.2
SGCA-201ENST00000262018 TRMT11Q7Z4G4 463 aaKnown RBP13.83□□□□□ -0.2
SGCA-201ENST00000262018 DAAM2Q86T65 1068 aa13.83□□□□□ -0.2
SGCA-201ENST00000262018 CTAGE6Q86UF2 777 aa13.83□□□□□ -0.2
SGCA-201ENST00000262018 NT5DC3Q86UY8 548 aa13.83□□□□□ -0.2
SGCA-201ENST00000262018 CTAGE4Q8IX94 777 aa13.83□□□□□ -0.2
SGCA-201ENST00000262018 SLC4A11Q8NBS3 891 aa13.83□□□□□ -0.2
SGCA-201ENST00000262018 CPA5Q8WXQ8 436 aa13.83□□□□□ -0.2
SGCA-201ENST00000262018 TFAP2BQ92481 460 aa13.83□□□□□ -0.2
SGCA-201ENST00000262018 GOLGA1Q92805 767 aa13.83□□□□□ -0.2
SGCA-201ENST00000262018 FOXJ1Q92949 421 aa13.83□□□□□ -0.2
SGCA-201ENST00000262018 ZSWIM1Q9BR11 485 aa13.83□□□□□ -0.2
SGCA-201ENST00000262018 ZNF518BQ9C0D4 1074 aa13.83□□□□□ -0.2
SGCA-201ENST00000262018 ELOVL4Q9GZR5 314 aa13.83□□□□□ -0.2
SGCA-201ENST00000262018 ARGLU1Q9NWB6 273 aaPredicted RBP13.83□□□□□ -0.2
SGCA-201ENST00000262018 RNF14Q9UBS8 474 aa13.83□□□□□ -0.2
SGCA-201ENST00000262018 FNDC3AQ9Y2H6 1198 aaKnown RBP13.83□□□□□ -0.2
SGCA-201ENST00000262018 MYO18AQ92614 2054 aaKnown RBP13.83□□□□□ -0.2
SGCA-201ENST00000262018 UNC79Q9P2D8 2635 aa13.83□□□□□ -0.2
SGCA-201ENST00000262018 A0A1B0GTW7 788 aa13.82□□□□□ -0.2
SGCA-201ENST00000262018 TEX51A0A1B0GUA7 166 aa13.82□□□□□ -0.2
SGCA-201ENST00000262018 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.82□□□□□ -0.2
SGCA-201ENST00000262018 ZNF185O15231 689 aa13.82□□□□□ -0.2
SGCA-201ENST00000262018 MED7O43513 233 aa13.82□□□□□ -0.2
SGCA-201ENST00000262018 TLX3O43711 291 aaPredicted RBP13.82□□□□□ -0.2
SGCA-201ENST00000262018 CER1O95813 267 aa13.82□□□□□ -0.2
SGCA-201ENST00000262018 ZNF883P0CG24 379 aa13.82□□□□□ -0.2
SGCA-201ENST00000262018 NDUFV2P19404 249 aa13.82□□□□□ -0.2
SGCA-201ENST00000262018 MATKP42679 507 aa13.82□□□□□ -0.2
SGCA-201ENST00000262018 LHX1P48742 406 aa13.82□□□□□ -0.2
SGCA-201ENST00000262018 SEMG2Q02383 582 aa13.82□□□□□ -0.2
SGCA-201ENST00000262018 C1QBPQ07021 282 aaKnown RBP13.82□□□□□ -0.2
SGCA-201ENST00000262018 PTP4A2Q12974 167 aa13.82□□□□□ -0.2
SGCA-201ENST00000262018 SMAD1Q15797 465 aaKnown RBP13.82□□□□□ -0.2
SGCA-201ENST00000262018 ERCC6LQ2NKX8 1250 aa13.82□□□□□ -0.2
SGCA-201ENST00000262018 RHBDF2Q6PJF5 856 aa13.82□□□□□ -0.2
SGCA-201ENST00000262018 PCSK4Q6UW60 755 aa13.82□□□□□ -0.2
SGCA-201ENST00000262018 PEX26Q7Z412 305 aa13.82□□□□□ -0.2
SGCA-201ENST00000262018 ZCCHC9Q8N567 271 aaKnown RBP13.82□□□□□ -0.2
SGCA-201ENST00000262018 ZNF564Q8TBZ8 553 aaPredicted RBP13.82□□□□□ -0.2
SGCA-201ENST00000262018 COG1Q8WTW3 980 aa13.82□□□□□ -0.2
SGCA-201ENST00000262018 UBXN4Q92575 508 aa13.82□□□□□ -0.2
SGCA-201ENST00000262018 TMEM176AQ96HP8 235 aa13.82□□□□□ -0.2
SGCA-201ENST00000262018 TWNKQ96RR1 684 aa13.82□□□□□ -0.2
SGCA-201ENST00000262018 NUP85Q9BW27 656 aa13.82□□□□□ -0.2
SGCA-201ENST00000262018 MIR1-1HGQ9H1L0 117 aa13.82□□□□□ -0.2
SGCA-201ENST00000262018 GOLPH3Q9H4A6 298 aa13.82□□□□□ -0.2
SGCA-201ENST00000262018 CD93Q9NPY3 652 aa13.82□□□□□ -0.2
SGCA-201ENST00000262018 CNOT8Q9UFF9 292 aaKnown RBP13.82□□□□□ -0.2
SGCA-201ENST00000262018 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.82□□□□□ -0.2
SGCA-201ENST00000262018 AMFRQ9UKV5 643 aa13.82□□□□□ -0.2
SGCA-201ENST00000262018 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.82□□□□□ -0.2
SGCA-201ENST00000262018 V9GYY5 206 aaPredicted RBP13.82□□□□□ -0.2
SGCA-201ENST00000262018 FAM170AA1A519 330 aa13.81□□□□□ -0.2
SGCA-201ENST00000262018 MEI4A8MW99 385 aa13.81□□□□□ -0.2
SGCA-201ENST00000262018 PDE2AO00408 941 aaPredicted RBP13.81□□□□□ -0.2
SGCA-201ENST00000262018 SLC9A3R1O14745 358 aaPredicted RBP13.81□□□□□ -0.2
SGCA-201ENST00000262018 GABRDO14764 452 aa13.81□□□□□ -0.2
SGCA-201ENST00000262018 FLRT2O43155 660 aa13.81□□□□□ -0.2
SGCA-201ENST00000262018 ATMINO43313 823 aaPredicted RBP13.81□□□□□ -0.2
SGCA-201ENST00000262018 ADH1CP00326 375 aa13.81□□□□□ -0.2
SGCA-201ENST00000262018 VDRP11473 427 aa13.81□□□□□ -0.2
SGCA-201ENST00000262018 ADH5P11766 374 aa13.81□□□□□ -0.2
SGCA-201ENST00000262018 WARSP23381 471 aaKnown RBP13.81□□□□□ -0.2
SGCA-201ENST00000262018 TAF1BQ53T94 588 aaPredicted RBP13.81□□□□□ -0.2
SGCA-201ENST00000262018 DHRS13Q6UX07 377 aa13.81□□□□□ -0.2
SGCA-201ENST00000262018 PASD1Q8IV76 773 aa13.81□□□□□ -0.2
SGCA-201ENST00000262018 SCN4BQ8IWT1 228 aa13.81□□□□□ -0.2
SGCA-201ENST00000262018 TMEM35BQ8NCS4 154 aa13.81□□□□□ -0.2
SGCA-201ENST00000262018 KBTBD7Q8WVZ9 684 aa13.81□□□□□ -0.2
SGCA-201ENST00000262018 NXPE2Q96DL1 559 aa13.81□□□□□ -0.2
SGCA-201ENST00000262018 HES6Q96HZ4 224 aa13.81□□□□□ -0.2
SGCA-201ENST00000262018 PBKQ96KB5 322 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms