RNA–Protein interactions for RNA: ENST00000261963.11

MCF2L-201, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 2,419 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-201ENST00000261963 CES4AQ5XG92 561 aa23.18■■□□□ 1.3
MCF2L-201ENST00000261963 OLFML2BQ68BL8 750 aa23.18■■□□□ 1.3
MCF2L-201ENST00000261963 RASSF3Q86WH2 238 aa23.18■■□□□ 1.3
MCF2L-201ENST00000261963 ULK2Q8IYT8 1036 aa23.18■■□□□ 1.3
MCF2L-201ENST00000261963 SMG8Q8ND04 991 aaKnown RBP23.18■■□□□ 1.3
MCF2L-201ENST00000261963 RBM15BQ8NDT2 890 aaKnown RBP23.18■■□□□ 1.3
MCF2L-201ENST00000261963 HNRNPABQ99729 332 aaKnown RBP23.18■■□□□ 1.3
MCF2L-201ENST00000261963 SYT17Q9BSW7 474 aa23.18■■□□□ 1.3
MCF2L-201ENST00000261963 DUSP16Q9BY84 665 aa23.18■■□□□ 1.3
MCF2L-201ENST00000261963 MOCS1Q9NZB8 636 aa23.18■■□□□ 1.3
MCF2L-201ENST00000261963 RCOR3Q9P2K3 495 aaPredicted RBP23.18■■□□□ 1.3
MCF2L-201ENST00000261963 IPPQ9Y573 584 aa23.18■■□□□ 1.3
MCF2L-201ENST00000261963 HUS1O60921 280 aa23.17■■□□□ 1.3
MCF2L-201ENST00000261963 KRT38O76015 456 aa23.17■■□□□ 1.3
MCF2L-201ENST00000261963 ENO1P06733 434 aaKnown RBP23.17■■□□□ 1.3
MCF2L-201ENST00000261963 WARSP23381 471 aaKnown RBP23.17■■□□□ 1.3
MCF2L-201ENST00000261963 MED21Q13503 144 aa23.17■■□□□ 1.3
MCF2L-201ENST00000261963 ACBD5Q5T8D3 534 aaPredicted RBP23.17■■□□□ 1.3
MCF2L-201ENST00000261963 TMCO4Q5TGY1 634 aa23.17■■□□□ 1.3
MCF2L-201ENST00000261963 C1orf146Q5VVC0 180 aa23.17■■□□□ 1.3
MCF2L-201ENST00000261963 PAQR9Q6ZVX9 377 aa23.17■■□□□ 1.3
MCF2L-201ENST00000261963 BNIPLQ7Z465 357 aa23.17■■□□□ 1.3
MCF2L-201ENST00000261963 APBB2Q92870 758 aa23.17■■□□□ 1.3
MCF2L-201ENST00000261963 TNIP3Q96KP6 325 aa23.17■■□□□ 1.3
MCF2L-201ENST00000261963 SLC13A1Q9BZW2 595 aa23.17■■□□□ 1.3
MCF2L-201ENST00000261963 ZDHHC7Q9NXF8 308 aa23.17■■□□□ 1.3
MCF2L-201ENST00000261963 NDUFA13Q9P0J0 144 aa23.17■■□□□ 1.3
MCF2L-201ENST00000261963 PPM1HQ9ULR3 514 aa23.17■■□□□ 1.3
MCF2L-201ENST00000261963 HACD1B0YJ81 288 aa23.17■■□□□ 1.3
MCF2L-201ENST00000261963 XPOTO43592 962 aaKnown RBP23.17■■□□□ 1.3
MCF2L-201ENST00000261963 BUD23O43709 281 aaKnown RBP23.17■■□□□ 1.3
MCF2L-201ENST00000261963 FKBP6O75344 327 aa23.17■■□□□ 1.3
MCF2L-201ENST00000261963 DAB1O75553 588 aa23.17■■□□□ 1.3
MCF2L-201ENST00000261963 IGFBP6P24592 240 aaPredicted RBP23.17■■□□□ 1.3
MCF2L-201ENST00000261963 LARP7Q4G0J3 582 aaKnown RBP eCLIP23.17■■□□□ 1.3
MCF2L-201ENST00000261963 DCAF6Q58WW2 860 aa23.17■■□□□ 1.3
MCF2L-201ENST00000261963 TLK2Q86UE8 772 aa23.17■■□□□ 1.3
MCF2L-201ENST00000261963 PDSS2Q86YH6 399 aa23.17■■□□□ 1.3
MCF2L-201ENST00000261963 UNC5BQ8IZJ1 945 aa23.17■■□□□ 1.3
MCF2L-201ENST00000261963 OR6Y1Q8NGX8 325 aa23.17■■□□□ 1.3
MCF2L-201ENST00000261963 LZICQ8WZA0 190 aa23.17■■□□□ 1.3
MCF2L-201ENST00000261963 NT5C3BQ969T7 300 aa23.17■■□□□ 1.3
MCF2L-201ENST00000261963 MTBPQ96DY7 904 aa23.17■■□□□ 1.3
MCF2L-201ENST00000261963 PARK7Q99497 189 aaKnown RBP23.17■■□□□ 1.3
MCF2L-201ENST00000261963 THTPAQ9BU02 230 aa23.17■■□□□ 1.3
MCF2L-201ENST00000261963 PLA2G4CQ9UP65 541 aa23.17■■□□□ 1.3
MCF2L-201ENST00000261963 GLTPD2A6NH11 291 aa23.16■■□□□ 1.3
MCF2L-201ENST00000261963 HNRNPRO43390 633 aaKnown RBP23.16■■□□□ 1.3
MCF2L-201ENST00000261963 PFDN1O60925 122 aa23.16■■□□□ 1.3
MCF2L-201ENST00000261963 ACAT1P24752 427 aaKnown RBP23.16■■□□□ 1.3
MCF2L-201ENST00000261963 PSEN2P49810 448 aa23.16■■□□□ 1.3
MCF2L-201ENST00000261963 NDUFV1P49821 464 aa23.16■■□□□ 1.3
MCF2L-201ENST00000261963 DNAL1Q4LDG9 190 aa23.16■■□□□ 1.3
MCF2L-201ENST00000261963 MROH9Q5TGP6 573 aa23.16■■□□□ 1.3
MCF2L-201ENST00000261963 STEAP4Q687X5 459 aa23.16■■□□□ 1.3
MCF2L-201ENST00000261963 RAPH1Q70E73 1250 aa23.16■■□□□ 1.3
MCF2L-201ENST00000261963 ALYREFQ86V81 257 aaKnown RBP23.16■■□□□ 1.3
MCF2L-201ENST00000261963 FBXO27Q8NI29 283 aa23.16■■□□□ 1.3
MCF2L-201ENST00000261963 MPP4Q96JB8 637 aa23.16■■□□□ 1.3
MCF2L-201ENST00000261963 CLPTM1LQ96KA5 538 aa23.16■■□□□ 1.3
MCF2L-201ENST00000261963 SLC7A8Q9UHI5 535 aa23.16■■□□□ 1.3
MCF2L-201ENST00000261963 WDR27A2RRH5 827 aa23.16■■□□□ 1.3
MCF2L-201ENST00000261963 HAS3O00219 553 aa23.16■■□□□ 1.3
MCF2L-201ENST00000261963 CYB561D2O14569 222 aa23.16■■□□□ 1.3
MCF2L-201ENST00000261963 ATP9BO43861 1147 aa23.16■■□□□ 1.3
MCF2L-201ENST00000261963 TMCC1O94876 653 aa23.16■■□□□ 1.3
MCF2L-201ENST00000261963 ITGA2BP08514 1039 aa23.16■■□□□ 1.3
MCF2L-201ENST00000261963 PIM1P11309 404 aaPredicted RBP23.16■■□□□ 1.3
MCF2L-201ENST00000261963 ASPHQ12797 758 aa23.16■■□□□ 1.3
MCF2L-201ENST00000261963 PSTKQ8IV42 348 aaKnown RBP23.16■■□□□ 1.3
MCF2L-201ENST00000261963 TOP6BLQ8N6T0 577 aa23.16■■□□□ 1.3
MCF2L-201ENST00000261963 RNF139Q8WU17 664 aa23.16■■□□□ 1.3
MCF2L-201ENST00000261963 FLRT1Q9NZU1 646 aa23.16■■□□□ 1.3
MCF2L-201ENST00000261963 SIRPGQ9P1W8 387 aa23.16■■□□□ 1.3
MCF2L-201ENST00000261963 CIDEBQ9UHD4 219 aa23.16■■□□□ 1.3
MCF2L-201ENST00000261963 FAM237BA0A1B0GVD1 139 aa23.15■■□□□ 1.3
MCF2L-201ENST00000261963 CAPN14A8MX76 684 aa23.15■■□□□ 1.3
MCF2L-201ENST00000261963 TPP2P29144 1249 aaPredicted RBP23.15■■□□□ 1.3
MCF2L-201ENST00000261963 FDFT1P37268 417 aa23.15■■□□□ 1.3
MCF2L-201ENST00000261963 GRIA2P42262 883 aa23.15■■□□□ 1.3
MCF2L-201ENST00000261963 GRM2Q14416 872 aa23.15■■□□□ 1.3
MCF2L-201ENST00000261963 ADGRG6Q86SQ4 1221 aa23.15■■□□□ 1.3
MCF2L-201ENST00000261963 COLGALT1Q8NBJ5 622 aa23.15■■□□□ 1.3
MCF2L-201ENST00000261963 TSPAN18Q96SJ8 248 aa23.15■■□□□ 1.3
MCF2L-201ENST00000261963 NPY6RQ99463 290 aa23.15■■□□□ 1.3
MCF2L-201ENST00000261963 SPECC1L-ADORA2AF8WAN1 911 aa23.14■■□□□ 1.3
MCF2L-201ENST00000261963 PTGESO14684 152 aa23.14■■□□□ 1.3
MCF2L-201ENST00000261963 NPR3P17342 541 aa23.14■■□□□ 1.3
MCF2L-201ENST00000261963 CRADDP78560 199 aa23.14■■□□□ 1.3
MCF2L-201ENST00000261963 DEUP1Q05D60 604 aa23.14■■□□□ 1.3
MCF2L-201ENST00000261963 BST1Q10588 318 aa23.14■■□□□ 1.3
MCF2L-201ENST00000261963 CYS1Q717R9 158 aa23.14■■□□□ 1.3
MCF2L-201ENST00000261963 NMD3Q96D46 503 aaKnown RBP23.14■■□□□ 1.3
MCF2L-201ENST00000261963 P2RY11Q96G91 374 aa23.14■■□□□ 1.3
MCF2L-201ENST00000261963 SYNJ2BP-COX16A0A087WUM0 186 aa23.14■■□□□ 1.29
MCF2L-201ENST00000261963 RNF103O00237 685 aa23.14■■□□□ 1.29
MCF2L-201ENST00000261963 ALDH1A2O94788 518 aa23.14■■□□□ 1.29
MCF2L-201ENST00000261963 ZNF865P0CJ78 1059 aaPredicted RBP23.14■■□□□ 1.29
MCF2L-201ENST00000261963 MLNP12872 115 aa23.14■■□□□ 1.29
MCF2L-201ENST00000261963 SYPL2Q5VXT5 272 aa23.14■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms