RNA–Protein interactions for RNA: ENST00000248139.7

RAB40C-201, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB40C, Length 2,699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-201ENST00000248139 HACD1B0YJ81 288 aa26.19■■□□□ 1.78
RAB40C-201ENST00000248139 ACADSP16219 412 aa26.19■■□□□ 1.78
RAB40C-201ENST00000248139 C1orf146Q5VVC0 180 aa26.19■■□□□ 1.78
RAB40C-201ENST00000248139 NPWQ8N729 165 aa26.19■■□□□ 1.78
RAB40C-201ENST00000248139 PPP1R36Q96LQ0 422 aa26.19■■□□□ 1.78
RAB40C-201ENST00000248139 TINF2Q9BSI4 451 aa26.19■■□□□ 1.78
RAB40C-201ENST00000248139 ULBP1Q9BZM6 244 aa26.19■■□□□ 1.78
RAB40C-201ENST00000248139 YIPF3Q9GZM5 350 aa26.19■■□□□ 1.78
RAB40C-201ENST00000248139 MMADHCQ9H3L0 296 aaPredicted RBP26.19■■□□□ 1.78
RAB40C-201ENST00000248139 CYP4F11Q9HBI6 524 aa26.19■■□□□ 1.78
RAB40C-201ENST00000248139 SBF1O95248 1867 aa26.19■■□□□ 1.78
RAB40C-201ENST00000248139 PLXNB2O15031 1838 aa26.19■■□□□ 1.78
RAB40C-201ENST00000248139 TM7SF2O76062 418 aa26.19■■□□□ 1.78
RAB40C-201ENST00000248139 STK10O94804 968 aaKnown RBP26.19■■□□□ 1.78
RAB40C-201ENST00000248139 PROCP04070 461 aa26.19■■□□□ 1.78
RAB40C-201ENST00000248139 PTPN1P18031 435 aaKnown RBP26.19■■□□□ 1.78
RAB40C-201ENST00000248139 RAP1GDS1P52306 607 aa26.19■■□□□ 1.78
RAB40C-201ENST00000248139 HSP90AA5PQ58FG0 334 aa26.19■■□□□ 1.78
RAB40C-201ENST00000248139 SPNS2Q8IVW8 549 aa26.19■■□□□ 1.78
RAB40C-201ENST00000248139 LMNTD2Q8IXW0 634 aa26.19■■□□□ 1.78
RAB40C-201ENST00000248139 SIX6OS1Q8N1H7 587 aa26.19■■□□□ 1.78
RAB40C-201ENST00000248139 APBB2Q92870 758 aa26.19■■□□□ 1.78
RAB40C-201ENST00000248139 RHOBTB2Q9BYZ6 727 aa26.19■■□□□ 1.78
RAB40C-201ENST00000248139 SNX15Q9NRS6 342 aa26.19■■□□□ 1.78
RAB40C-201ENST00000248139 ARHGAP42A6NI28 874 aa26.18■■□□□ 1.78
RAB40C-201ENST00000248139 CD4P01730 458 aa26.18■■□□□ 1.78
RAB40C-201ENST00000248139 MLNP12872 115 aa26.18■■□□□ 1.78
RAB40C-201ENST00000248139 NPR3P17342 541 aa26.18■■□□□ 1.78
RAB40C-201ENST00000248139 PDK1Q15118 436 aa26.18■■□□□ 1.78
RAB40C-201ENST00000248139 TMEM154Q6P9G4 183 aa26.18■■□□□ 1.78
RAB40C-201ENST00000248139 EDEM1Q92611 657 aa26.18■■□□□ 1.78
RAB40C-201ENST00000248139 GDAP2Q9NXN4 497 aa26.18■■□□□ 1.78
RAB40C-201ENST00000248139 IPPQ9Y573 584 aa26.18■■□□□ 1.78
RAB40C-201ENST00000248139 CCL15-CCL14A0A0B4J2E2 113 aa26.18■■□□□ 1.78
RAB40C-201ENST00000248139 A6NHS1 94 aa26.18■■□□□ 1.78
RAB40C-201ENST00000248139 ZBTB24O43167 697 aaPredicted RBP26.18■■□□□ 1.78
RAB40C-201ENST00000248139 NCF2P19878 526 aaPredicted RBP26.18■■□□□ 1.78
RAB40C-201ENST00000248139 SAT1P21673 171 aa26.18■■□□□ 1.78
RAB40C-201ENST00000248139 NOS2P35228 1153 aa26.18■■□□□ 1.78
RAB40C-201ENST00000248139 CCL15Q16663 113 aa26.18■■□□□ 1.78
RAB40C-201ENST00000248139 STRA8Q7Z7C7 330 aa26.18■■□□□ 1.78
RAB40C-201ENST00000248139 TNIP3Q96KP6 325 aa26.18■■□□□ 1.78
RAB40C-201ENST00000248139 ZNF560Q96MR9 790 aa26.18■■□□□ 1.78
RAB40C-201ENST00000248139 CPSF2Q9P2I0 782 aaKnown RBP26.18■■□□□ 1.78
RAB40C-201ENST00000248139 COPG2Q9UBF2 871 aa26.18■■□□□ 1.78
RAB40C-201ENST00000248139 MAGEC1O60732 1142 aa26.17■■□□□ 1.78
RAB40C-201ENST00000248139 PDE5AO76074 875 aa26.17■■□□□ 1.78
RAB40C-201ENST00000248139 POLBP06746 335 aa26.17■■□□□ 1.78
RAB40C-201ENST00000248139 GLUD2P49448 558 aa26.17■■□□□ 1.78
RAB40C-201ENST00000248139 EPHB1P54762 984 aa26.17■■□□□ 1.78
RAB40C-201ENST00000248139 ATP2A3Q93084 1043 aa26.17■■□□□ 1.78
RAB40C-201ENST00000248139 PPM1HQ9ULR3 514 aa26.17■■□□□ 1.78
RAB40C-201ENST00000248139 CORO1CQ9ULV4 474 aaPredicted RBP26.17■■□□□ 1.78
RAB40C-201ENST00000248139 DICER1Q9UPY3 1922 aaKnown RBP26.17■■□□□ 1.78
RAB40C-201ENST00000248139 SIN3BO75182 1162 aa26.17■■□□□ 1.78
RAB40C-201ENST00000248139 DAB1O75553 588 aa26.17■■□□□ 1.78
RAB40C-201ENST00000248139 USP17L7P0C7H9 530 aa26.17■■□□□ 1.78
RAB40C-201ENST00000248139 PTPN3P26045 913 aa26.17■■□□□ 1.78
RAB40C-201ENST00000248139 CNTFP26441 200 aa26.17■■□□□ 1.78
RAB40C-201ENST00000248139 EPHX2P34913 555 aa26.17■■□□□ 1.78
RAB40C-201ENST00000248139 CPOXP36551 454 aa26.17■■□□□ 1.78
RAB40C-201ENST00000248139 IDH3AP50213 366 aa26.17■■□□□ 1.78
RAB40C-201ENST00000248139 BEX3Q00994 111 aa26.17■■□□□ 1.78
RAB40C-201ENST00000248139 DPYSQ14117 519 aa26.17■■□□□ 1.78
RAB40C-201ENST00000248139 C9orf131Q5VYM1 1079 aa26.17■■□□□ 1.78
RAB40C-201ENST00000248139 NAPRTQ6XQN6 538 aa26.17■■□□□ 1.78
RAB40C-201ENST00000248139 ARHGAP24Q8N264 748 aa26.17■■□□□ 1.78
RAB40C-201ENST00000248139 HIPK4Q8NE63 616 aa26.17■■□□□ 1.78
RAB40C-201ENST00000248139 CCDC124Q96CT7 223 aaKnown RBP26.17■■□□□ 1.78
RAB40C-201ENST00000248139 APOBEC2Q9Y235 224 aaKnown RBP26.17■■□□□ 1.78
RAB40C-201ENST00000248139 DCLK1O15075 740 aa26.16■■□□□ 1.78
RAB40C-201ENST00000248139 RALBP11234 206 aa26.16■■□□□ 1.78
RAB40C-201ENST00000248139 RABGAP1LQ5R372 815 aa26.16■■□□□ 1.78
RAB40C-201ENST00000248139 SMG8Q8ND04 991 aaKnown RBP26.16■■□□□ 1.78
RAB40C-201ENST00000248139 WNT8BQ93098 351 aa26.16■■□□□ 1.78
RAB40C-201ENST00000248139 FAM136AQ96C01 138 aa26.16■■□□□ 1.78
RAB40C-201ENST00000248139 ANKRD27Q96NW4 1050 aa26.16■■□□□ 1.78
RAB40C-201ENST00000248139 HNRNPABQ99729 332 aaKnown RBP26.16■■□□□ 1.78
RAB40C-201ENST00000248139 DLGAP2Q9P1A6 1054 aa26.16■■□□□ 1.78
RAB40C-201ENST00000248139 DCDC2Q9UHG0 476 aa26.16■■□□□ 1.78
RAB40C-201ENST00000248139 KLC1Q07866 573 aa26.16■■□□□ 1.78
RAB40C-201ENST00000248139 FSTL4Q6MZW2 842 aa26.16■■□□□ 1.78
RAB40C-201ENST00000248139 PHTF2Q8N3S3 785 aa26.16■■□□□ 1.78
RAB40C-201ENST00000248139 BRI3BPQ8WY22 251 aa26.16■■□□□ 1.78
RAB40C-201ENST00000248139 CHRAC1Q9NRG0 131 aa26.16■■□□□ 1.78
RAB40C-201ENST00000248139 PACSIN3Q9UKS6 424 aa26.16■■□□□ 1.78
RAB40C-201ENST00000248139 SHROOM3Q8TF72 1996 aa26.16■■□□□ 1.78
RAB40C-201ENST00000248139 A0A088AWK7 358 aa26.15■■□□□ 1.78
RAB40C-201ENST00000248139 RRN3P2A6NIE6 340 aa26.15■■□□□ 1.78
RAB40C-201ENST00000248139 SERPINE1P05121 402 aa26.15■■□□□ 1.78
RAB40C-201ENST00000248139 ADRA1BP35368 520 aa26.15■■□□□ 1.78
RAB40C-201ENST00000248139 GCKP35557 465 aa26.15■■□□□ 1.78
RAB40C-201ENST00000248139 ZBTB17Q13105 803 aa26.15■■□□□ 1.78
RAB40C-201ENST00000248139 LRRC36Q1X8D7 754 aa26.15■■□□□ 1.78
RAB40C-201ENST00000248139 SV2CQ496J9 727 aa26.15■■□□□ 1.78
RAB40C-201ENST00000248139 CYS1Q717R9 158 aa26.15■■□□□ 1.78
RAB40C-201ENST00000248139 RAB3IL1Q8TBN0 382 aa26.15■■□□□ 1.78
RAB40C-201ENST00000248139 CELF6Q96J87 481 aaKnown RBP26.15■■□□□ 1.78
RAB40C-201ENST00000248139 ABHD16BQ9H3Z7 469 aa26.15■■□□□ 1.78
RAB40C-201ENST00000248139 CRTAC1Q9NQ79 661 aa26.15■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms