RNA–Protein interactions for RNA: ENST00000225576.7

TVP23C-201, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

TSL 1 (best) BASIC

Gene TVP23C, Length 1,527 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-201ENST00000225576 ROPN1Q9HAT0 212 aaPredicted RBP17.25■□□□□ 0.35
TVP23C-201ENST00000225576 LINC01553A4QN01 128 aa17.24■□□□□ 0.35
TVP23C-201ENST00000225576 POLR3GO15318 223 aaPredicted RBP17.24■□□□□ 0.35
TVP23C-201ENST00000225576 ACSL3O95573 720 aa17.24■□□□□ 0.35
TVP23C-201ENST00000225576 OAS1P00973 400 aaKnown RBP17.24■□□□□ 0.35
TVP23C-201ENST00000225576 F11P03951 625 aa17.24■□□□□ 0.35
TVP23C-201ENST00000225576 HMBSP08397 361 aa17.24■□□□□ 0.35
TVP23C-201ENST00000225576 CCNCP24863 283 aa17.24■□□□□ 0.35
TVP23C-201ENST00000225576 ERVFC1P60507 584 aa17.24■□□□□ 0.35
TVP23C-201ENST00000225576 CDK16Q00536 496 aa17.24■□□□□ 0.35
TVP23C-201ENST00000225576 GAD2Q05329 585 aa17.24■□□□□ 0.35
TVP23C-201ENST00000225576 PARP6Q2NL67 630 aa17.24■□□□□ 0.35
TVP23C-201ENST00000225576 TTMPQ5BVD1 217 aa17.24■□□□□ 0.35
TVP23C-201ENST00000225576 FNBP1LQ5T0N5 605 aa17.24■□□□□ 0.35
TVP23C-201ENST00000225576 FBXL22Q6P050 247 aa17.24■□□□□ 0.35
TVP23C-201ENST00000225576 CCDC13Q8IYE1 715 aa17.24■□□□□ 0.35
TVP23C-201ENST00000225576 MRPL43Q8N983 215 aaKnown RBP17.24■□□□□ 0.35
TVP23C-201ENST00000225576 SPPL3Q8TCT6 385 aa17.24■□□□□ 0.35
TVP23C-201ENST00000225576 DPF3Q92784 378 aa17.24■□□□□ 0.35
TVP23C-201ENST00000225576 AZIN2Q96A70 460 aa17.24■□□□□ 0.35
TVP23C-201ENST00000225576 PLD4Q96BZ4 506 aa17.24■□□□□ 0.35
TVP23C-201ENST00000225576 CELF6Q96J87 481 aaKnown RBP17.24■□□□□ 0.35
TVP23C-201ENST00000225576 C9orf72Q96LT7 481 aa17.24■□□□□ 0.35
TVP23C-201ENST00000225576 TMEM248Q9NWD8 314 aa17.24■□□□□ 0.35
TVP23C-201ENST00000225576 MPP6Q9NZW5 540 aa17.24■□□□□ 0.35
TVP23C-201ENST00000225576 VPS18Q9P253 973 aa17.24■□□□□ 0.35
TVP23C-201ENST00000225576 IGSF9Q9P2J2 1179 aa17.24■□□□□ 0.35
TVP23C-201ENST00000225576 TRHDEQ9UKU6 1024 aa17.24■□□□□ 0.35
TVP23C-201ENST00000225576 VANGL2Q9ULK5 521 aa17.24■□□□□ 0.35
TVP23C-201ENST00000225576 NR2E3Q9Y5X4 410 aa17.24■□□□□ 0.35
TVP23C-201ENST00000225576 CLUHO75153 1309 aa17.23■□□□□ 0.35
TVP23C-201ENST00000225576 C5orf67F2Z3F1 127 aa17.23■□□□□ 0.35
TVP23C-201ENST00000225576 APRTP07741 180 aa17.23■□□□□ 0.35
TVP23C-201ENST00000225576 PTPN3P26045 913 aa17.23■□□□□ 0.35
TVP23C-201ENST00000225576 HARS2P49590 506 aaKnown RBP17.23■□□□□ 0.35
TVP23C-201ENST00000225576 KCNQ1P51787 676 aa17.23■□□□□ 0.35
TVP23C-201ENST00000225576 KRT71Q3SY84 523 aa17.23■□□□□ 0.35
TVP23C-201ENST00000225576 FAXCQ5TGI0 409 aa17.23■□□□□ 0.35
TVP23C-201ENST00000225576 AGBL2Q5U5Z8 902 aa17.23■□□□□ 0.35
TVP23C-201ENST00000225576 RAP1GAP2Q684P5 730 aa17.23■□□□□ 0.35
TVP23C-201ENST00000225576 TMEM150AQ86TG1 271 aa17.23■□□□□ 0.35
TVP23C-201ENST00000225576 ZBED8Q8IZ13 594 aa17.23■□□□□ 0.35
TVP23C-201ENST00000225576 ZNF567Q8N184 647 aa17.23■□□□□ 0.35
TVP23C-201ENST00000225576 UMODL1-AS1Q8N2C9 162 aa17.23■□□□□ 0.35
TVP23C-201ENST00000225576 ATP6V1G3Q96LB4 118 aa17.23■□□□□ 0.35
TVP23C-201ENST00000225576 SLC39A8Q9C0K1 460 aa17.23■□□□□ 0.35
TVP23C-201ENST00000225576 RETREG1Q9H6L5 497 aa17.23■□□□□ 0.35
TVP23C-201ENST00000225576 ALG13Q9NP73 1137 aaKnown RBP17.23■□□□□ 0.35
TVP23C-201ENST00000225576 ENTPD7Q9NQZ7 604 aa17.23■□□□□ 0.35
TVP23C-201ENST00000225576 SEPT10Q9P0V9 454 aa17.23■□□□□ 0.35
TVP23C-201ENST00000225576 GOLGA6CA6NDK9 693 aa17.22■□□□□ 0.35
TVP23C-201ENST00000225576 C2orf71A6NGG8 1288 aa17.22■□□□□ 0.35
TVP23C-201ENST00000225576 HMGB1P1B2RPK0 211 aaPredicted RBP17.22■□□□□ 0.35
TVP23C-201ENST00000225576 KCNK1O00180 336 aa17.22■□□□□ 0.35
TVP23C-201ENST00000225576 ACSL4O60488 711 aa17.22■□□□□ 0.35
TVP23C-201ENST00000225576 TCEA3O75764 348 aa17.22■□□□□ 0.35
TVP23C-201ENST00000225576 C1RP00736 705 aa17.22■□□□□ 0.35
TVP23C-201ENST00000225576 RB1P06400 928 aa17.22■□□□□ 0.35
TVP23C-201ENST00000225576 SPATA31D3P0C874 917 aa17.22■□□□□ 0.35
TVP23C-201ENST00000225576 GOLGA6DP0CG33 693 aa17.22■□□□□ 0.35
TVP23C-201ENST00000225576 TSHRP16473 764 aa17.22■□□□□ 0.35
TVP23C-201ENST00000225576 SLC11A2P49281 568 aa17.22■□□□□ 0.35
TVP23C-201ENST00000225576 NDST2P52849 883 aa17.22■□□□□ 0.35
TVP23C-201ENST00000225576 C5orf22Q49AR2 442 aa17.22■□□□□ 0.35
TVP23C-201ENST00000225576 MSS51Q4VC12 460 aa17.22■□□□□ 0.35
TVP23C-201ENST00000225576 TEX44Q53QW1 395 aa17.22■□□□□ 0.35
TVP23C-201ENST00000225576 NADSYN1Q6IA69 706 aa17.22■□□□□ 0.35
TVP23C-201ENST00000225576 SPATA31D4Q6ZUB0 917 aa17.22■□□□□ 0.35
TVP23C-201ENST00000225576 RTL10Q7L3V2 364 aa17.22■□□□□ 0.35
TVP23C-201ENST00000225576 PID1Q7Z2X4 250 aa17.22■□□□□ 0.35
TVP23C-201ENST00000225576 KREMEN2Q8NCW0 462 aa17.22■□□□□ 0.35
TVP23C-201ENST00000225576 POF1BQ8WVV4 589 aa17.22■□□□□ 0.35
TVP23C-201ENST00000225576 KLF16Q9BXK1 252 aaPredicted RBP17.22■□□□□ 0.35
TVP23C-201ENST00000225576 IL21Q9HBE4 155 aa17.22■□□□□ 0.35
TVP23C-201ENST00000225576 ZNF334Q9HCZ1 680 aaPredicted RBP17.22■□□□□ 0.35
TVP23C-201ENST00000225576 EIF2B3Q9NR50 452 aaKnown RBP17.22■□□□□ 0.35
TVP23C-201ENST00000225576 GOLGA6AQ9NYA3 693 aa17.22■□□□□ 0.35
TVP23C-201ENST00000225576 E7EVH7 732 aa17.21■□□□□ 0.35
TVP23C-201ENST00000225576 DFFAO00273 331 aa17.21■□□□□ 0.35
TVP23C-201ENST00000225576 LRG1P02750 347 aa17.21■□□□□ 0.35
TVP23C-201ENST00000225576 TACR2P21452 398 aa17.21■□□□□ 0.35
TVP23C-201ENST00000225576 STAT4Q14765 748 aa17.21■□□□□ 0.35
TVP23C-201ENST00000225576 FASTKD3Q14CZ7 662 aaKnown RBP17.21■□□□□ 0.35
TVP23C-201ENST00000225576 FAM182AQ5T1J6 154 aa17.21■□□□□ 0.35
TVP23C-201ENST00000225576 C6orf118Q5T5N4 469 aa17.21■□□□□ 0.35
TVP23C-201ENST00000225576 CHSY1Q86X52 802 aa17.21■□□□□ 0.35
TVP23C-201ENST00000225576 ATPAF2Q8N5M1 289 aa17.21■□□□□ 0.35
TVP23C-201ENST00000225576 UHMK1Q8TAS1 419 aaKnown RBP17.21■□□□□ 0.35
TVP23C-201ENST00000225576 ZSCAN18Q8TBC5 510 aaPredicted RBP17.21■□□□□ 0.35
TVP23C-201ENST00000225576 PYROXD1Q8WU10 500 aa17.21■□□□□ 0.35
TVP23C-201ENST00000225576 DEPDC1BQ8WUY9 529 aa17.21■□□□□ 0.35
TVP23C-201ENST00000225576 IGSF8Q969P0 613 aa17.21■□□□□ 0.35
TVP23C-201ENST00000225576 PGM2Q96G03 612 aa17.21■□□□□ 0.35
TVP23C-201ENST00000225576 SERPINB12Q96P63 405 aa17.21■□□□□ 0.35
TVP23C-201ENST00000225576 CCDC77Q9BR77 488 aa17.21■□□□□ 0.35
TVP23C-201ENST00000225576 RNF38Q9H0F5 515 aa17.21■□□□□ 0.35
TVP23C-201ENST00000225576 LRRC4CQ9HCJ2 640 aa17.21■□□□□ 0.35
TVP23C-201ENST00000225576 TLR9Q9NR96 1032 aa17.21■□□□□ 0.35
TVP23C-201ENST00000225576 NDFIP2Q9NV92 336 aa17.21■□□□□ 0.35
TVP23C-201ENST00000225576 KLHL8Q9P2G9 620 aaPredicted RBP17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms