RNA–Protein interactions for RNA: ENST00000216727.8

PABPN1-201, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PABPN1, Length 2,001 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-201ENST00000216727 FAM92AA1XBS5 289 aa30.44■■■□□ 2.46
PABPN1-201ENST00000216727 PGAM1P18669 254 aa30.44■■■□□ 2.46
PABPN1-201ENST00000216727 SLC11A1P49279 550 aa30.44■■■□□ 2.46
PABPN1-201ENST00000216727 NPAS4Q8IUM7 802 aa30.44■■■□□ 2.46
PABPN1-201ENST00000216727 CCT6BQ92526 530 aa30.44■■■□□ 2.46
PABPN1-201ENST00000216727 TBC1D31Q96DN5 1066 aa30.44■■■□□ 2.46
PABPN1-201ENST00000216727 MTBPQ96DY7 904 aa30.44■■■□□ 2.46
PABPN1-201ENST00000216727 OXNAD1Q96HP4 312 aaPredicted RBP30.44■■■□□ 2.46
PABPN1-201ENST00000216727 FCRL2Q96LA5 508 aaPredicted RBP30.44■■■□□ 2.46
PABPN1-201ENST00000216727 TSGA13Q96PP4 275 aa30.44■■■□□ 2.46
PABPN1-201ENST00000216727 MRPL9Q9BYD2 267 aaKnown RBP30.44■■■□□ 2.46
PABPN1-201ENST00000216727 PAK6Q9NQU5 681 aaPredicted RBP30.44■■■□□ 2.46
PABPN1-201ENST00000216727 ZBTB24O43167 697 aaPredicted RBP30.44■■■□□ 2.46
PABPN1-201ENST00000216727 MGAT1P26572 445 aa30.44■■■□□ 2.46
PABPN1-201ENST00000216727 GPR15P49685 360 aa30.44■■■□□ 2.46
PABPN1-201ENST00000216727 GATMP50440 423 aa30.44■■■□□ 2.46
PABPN1-201ENST00000216727 ELAVL2Q12926 359 aaKnown RBP30.44■■■□□ 2.46
PABPN1-201ENST00000216727 ZBTB17Q13105 803 aa30.44■■■□□ 2.46
PABPN1-201ENST00000216727 ARTNQ5T4W7 220 aa30.44■■■□□ 2.46
PABPN1-201ENST00000216727 SDHAF4Q5VUM1 108 aa30.44■■■□□ 2.46
PABPN1-201ENST00000216727 ZSCAN18Q8TBC5 510 aaPredicted RBP30.44■■■□□ 2.46
PABPN1-201ENST00000216727 APOPT1Q96IL0 206 aa30.44■■■□□ 2.46
PABPN1-201ENST00000216727 TMEM175Q9BSA9 504 aa30.44■■■□□ 2.46
PABPN1-201ENST00000216727 KDM4CQ9H3R0 1056 aa30.44■■■□□ 2.46
PABPN1-201ENST00000216727 GOLGA8RI6L899 631 aa30.43■■■□□ 2.46
PABPN1-201ENST00000216727 CSH1P0DML2 217 aa30.43■■■□□ 2.46
PABPN1-201ENST00000216727 CSH2P0DML3 217 aa30.43■■■□□ 2.46
PABPN1-201ENST00000216727 CD68P34810 354 aaPredicted RBP30.43■■■□□ 2.46
PABPN1-201ENST00000216727 MAGEA9P43362 315 aa30.43■■■□□ 2.46
PABPN1-201ENST00000216727 SESN2P58004 480 aaPredicted RBP30.43■■■□□ 2.46
PABPN1-201ENST00000216727 KCTD11Q693B1 232 aa30.43■■■□□ 2.46
PABPN1-201ENST00000216727 CASC4Q6P4E1 433 aa30.43■■■□□ 2.46
PABPN1-201ENST00000216727 DEPDC1BQ8WUY9 529 aa30.43■■■□□ 2.46
PABPN1-201ENST00000216727 TEKT5Q96M29 485 aa30.43■■■□□ 2.46
PABPN1-201ENST00000216727 PGLYRP2Q96PD5 576 aa30.43■■■□□ 2.46
PABPN1-201ENST00000216727 KLF6Q99612 283 aaPredicted RBP30.43■■■□□ 2.46
PABPN1-201ENST00000216727 TLR6Q9Y2C9 796 aa30.43■■■□□ 2.46
PABPN1-201ENST00000216727 NUP205Q92621 2012 aa30.43■■■□□ 2.46
PABPN1-201ENST00000216727 CCT8L1PA6NM43 557 aa30.42■■■□□ 2.46
PABPN1-201ENST00000216727 TRIM49D1C9J1S8 452 aa30.42■■■□□ 2.46
PABPN1-201ENST00000216727 KRT38O76015 456 aa30.42■■■□□ 2.46
PABPN1-201ENST00000216727 SERPINB9P50453 376 aa30.42■■■□□ 2.46
PABPN1-201ENST00000216727 ZKSCAN8Q15776 578 aaPredicted RBP30.42■■■□□ 2.46
PABPN1-201ENST00000216727 SEPT7Q16181 437 aaKnown RBP30.42■■■□□ 2.46
PABPN1-201ENST00000216727 FUT10Q6P4F1 479 aa30.42■■■□□ 2.46
PABPN1-201ENST00000216727 SPATA21Q7Z572 469 aa30.42■■■□□ 2.46
PABPN1-201ENST00000216727 ATAD1Q8NBU5 361 aa30.42■■■□□ 2.46
PABPN1-201ENST00000216727 CELF6Q96J87 481 aaKnown RBP30.42■■■□□ 2.46
PABPN1-201ENST00000216727 C1orf74Q96LT6 269 aa30.42■■■□□ 2.46
PABPN1-201ENST00000216727 PITPNM3Q9BZ71 974 aa30.42■■■□□ 2.46
PABPN1-201ENST00000216727 LPXNO60711 386 aa30.42■■■□□ 2.46
PABPN1-201ENST00000216727 NEK3P51956 506 aa30.42■■■□□ 2.46
PABPN1-201ENST00000216727 SMARCB1Q12824 385 aa30.42■■■□□ 2.46
PABPN1-201ENST00000216727 TCTN1Q2MV58 587 aa30.42■■■□□ 2.46
PABPN1-201ENST00000216727 SLC39A13Q96H72 371 aa30.42■■■□□ 2.46
PABPN1-201ENST00000216727 PLCD4Q9BRC7 762 aa30.42■■■□□ 2.46
PABPN1-201ENST00000216727 TET1Q8NFU7 2136 aa30.41■■■□□ 2.46
PABPN1-201ENST00000216727 TBC1D4O60343 1298 aa30.41■■■□□ 2.46
PABPN1-201ENST00000216727 SLC2A3P11169 496 aa30.41■■■□□ 2.46
PABPN1-201ENST00000216727 CCNCP24863 283 aa30.41■■■□□ 2.46
PABPN1-201ENST00000216727 USP46P62068 366 aa30.41■■■□□ 2.46
PABPN1-201ENST00000216727 GPR17Q13304 367 aa30.41■■■□□ 2.46
PABPN1-201ENST00000216727 LACTB2Q53H82 288 aaPredicted RBP30.41■■■□□ 2.46
PABPN1-201ENST00000216727 ARHGAP12Q8IWW6 846 aa30.41■■■□□ 2.46
PABPN1-201ENST00000216727 LRRC8CQ8TDW0 803 aa30.41■■■□□ 2.46
PABPN1-201ENST00000216727 AGAP3Q96P47 875 aa30.41■■■□□ 2.46
PABPN1-201ENST00000216727 VPS11Q9H270 941 aa30.41■■■□□ 2.46
PABPN1-201ENST00000216727 NUDT5Q9UKK9 219 aa30.41■■■□□ 2.46
PABPN1-201ENST00000216727 PYGBP11216 843 aa30.4■■■□□ 2.46
PABPN1-201ENST00000216727 ALADP13716 330 aa30.4■■■□□ 2.46
PABPN1-201ENST00000216727 ADRA1DP25100 572 aa30.4■■■□□ 2.46
PABPN1-201ENST00000216727 CGB2Q6NT52 195 aa30.4■■■□□ 2.46
PABPN1-201ENST00000216727 CNPY4Q8N129 248 aa30.4■■■□□ 2.46
PABPN1-201ENST00000216727 SPPL2BQ8TCT7 592 aa30.4■■■□□ 2.46
PABPN1-201ENST00000216727 OXCT2Q9BYC2 517 aaPredicted RBP30.4■■■□□ 2.46
PABPN1-201ENST00000216727 SYBUQ9NX95 663 aa30.4■■■□□ 2.46
PABPN1-201ENST00000216727 STARD13Q9Y3M8 1113 aa30.4■■■□□ 2.46
PABPN1-201ENST00000216727 LOC101059915A0A1B0GWI6 518 aaPredicted RBP30.4■■■□□ 2.46
PABPN1-201ENST00000216727 GALTP07902 379 aa30.4■■■□□ 2.46
PABPN1-201ENST00000216727 CNTFP26441 200 aa30.4■■■□□ 2.46
PABPN1-201ENST00000216727 MLLT6P55198 1093 aaPredicted RBP30.4■■■□□ 2.46
PABPN1-201ENST00000216727 CRADDP78560 199 aa30.4■■■□□ 2.46
PABPN1-201ENST00000216727 NAB1Q13506 487 aa30.4■■■□□ 2.46
PABPN1-201ENST00000216727 CRYMQ14894 314 aa30.4■■■□□ 2.46
PABPN1-201ENST00000216727 ZNF449Q6P9G9 518 aa30.4■■■□□ 2.46
PABPN1-201ENST00000216727 MARK2Q7KZI7 788 aaKnown RBP30.4■■■□□ 2.46
PABPN1-201ENST00000216727 C10orf67Q8IYJ2 551 aa30.4■■■□□ 2.46
PABPN1-201ENST00000216727 STKLD1Q8NE28 680 aa30.4■■■□□ 2.46
PABPN1-201ENST00000216727 CASS4Q9NQ75 786 aa30.4■■■□□ 2.46
PABPN1-201ENST00000216727 CLIC5Q9NZA1 410 aa30.4■■■□□ 2.46
PABPN1-201ENST00000216727 GMIPQ9P107 970 aa30.4■■■□□ 2.46
PABPN1-201ENST00000216727 PRKAG3Q9UGI9 489 aa30.4■■■□□ 2.46
PABPN1-201ENST00000216727 HS3ST4Q9Y661 456 aa30.4■■■□□ 2.46
PABPN1-201ENST00000216727 UGT1A9O60656 530 aa30.39■■■□□ 2.46
PABPN1-201ENST00000216727 RTN3O95197 1032 aaPredicted RBP30.39■■■□□ 2.46
PABPN1-201ENST00000216727 CXCL10P02778 98 aa30.39■■■□□ 2.46
PABPN1-201ENST00000216727 YWHAQP27348 245 aa30.39■■■□□ 2.46
PABPN1-201ENST00000216727 DNAJC3Q13217 504 aa30.39■■■□□ 2.46
PABPN1-201ENST00000216727 KLHDC8BQ8IXV7 354 aa30.39■■■□□ 2.46
PABPN1-201ENST00000216727 TTC9BQ8N6N2 239 aa30.39■■■□□ 2.46
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms