RNA–Protein interactions for RNA: ENST00000216484.6

SPTLC2-201, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC2, Length 8,170 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-201ENST00000216484 KLK14Q9P0G3 267 aa14.88□□□□□ -0.03
SPTLC2-201ENST00000216484 SASH1O94885 1247 aa14.88□□□□□ -0.03
SPTLC2-201ENST00000216484 MARSP56192 900 aaKnown RBP14.88□□□□□ -0.03
SPTLC2-201ENST00000216484 USP46P62068 366 aa14.88□□□□□ -0.03
SPTLC2-201ENST00000216484 MPP3Q13368 585 aa14.88□□□□□ -0.03
SPTLC2-201ENST00000216484 EPC2Q52LR7 807 aa14.88□□□□□ -0.03
SPTLC2-201ENST00000216484 PRR5LQ6MZQ0 368 aa14.88□□□□□ -0.03
SPTLC2-201ENST00000216484 MYCBPAPQ8TBZ2 947 aa14.88□□□□□ -0.03
SPTLC2-201ENST00000216484 BSDC1Q9NW68 430 aaPredicted RBP14.88□□□□□ -0.03
SPTLC2-201ENST00000216484 ATPIF1Q9UII2 106 aa14.88□□□□□ -0.03
SPTLC2-201ENST00000216484 ZNF518AQ6AHZ1 1483 aa14.88□□□□□ -0.03
SPTLC2-201ENST00000216484 A0A1W2PQ72 361 aa14.87□□□□□ -0.03
SPTLC2-201ENST00000216484 PCNX4Q63HM2 1172 aa14.87□□□□□ -0.03
SPTLC2-201ENST00000216484 TTC27Q6P3X3 843 aa14.87□□□□□ -0.03
SPTLC2-201ENST00000216484 ZC3H7AQ8IWR0 971 aaKnown RBP14.87□□□□□ -0.03
SPTLC2-201ENST00000216484 PIH1D3Q9NQM4 214 aaKnown RBP14.87□□□□□ -0.03
SPTLC2-201ENST00000216484 CKLFQ9UBR5 152 aa14.87□□□□□ -0.03
SPTLC2-201ENST00000216484 LRCH1Q9Y2L9 728 aa14.87□□□□□ -0.03
SPTLC2-201ENST00000216484 ARHGAP31Q2M1Z3 1444 aa14.87□□□□□ -0.03
SPTLC2-201ENST00000216484 LOC110117498-PIK3R3F6TDL0 507 aa14.87□□□□□ -0.03
SPTLC2-201ENST00000216484 CBX4O00257 560 aa14.87□□□□□ -0.03
SPTLC2-201ENST00000216484 DBTP11182 482 aaKnown RBP14.87□□□□□ -0.03
SPTLC2-201ENST00000216484 HSD3B1P14060 373 aa14.87□□□□□ -0.03
SPTLC2-201ENST00000216484 H2AFXP16104 143 aaPredicted RBP14.87□□□□□ -0.03
SPTLC2-201ENST00000216484 YY1P25490 414 aa14.87□□□□□ -0.03
SPTLC2-201ENST00000216484 IL18Q14116 193 aa14.87□□□□□ -0.03
SPTLC2-201ENST00000216484 ZNF248Q8NDW4 579 aa14.87□□□□□ -0.03
SPTLC2-201ENST00000216484 BHLHE22Q8NFJ8 381 aaPredicted RBP14.87□□□□□ -0.03
SPTLC2-201ENST00000216484 SLC4A5Q9BY07 1137 aa14.87□□□□□ -0.03
SPTLC2-201ENST00000216484 DPP3Q9NY33 737 aa14.87□□□□□ -0.03
SPTLC2-201ENST00000216484 PLOD2O00469 737 aa14.87□□□□□ -0.03
SPTLC2-201ENST00000216484 PGRMC2O15173 223 aa14.87□□□□□ -0.03
SPTLC2-201ENST00000216484 OR10H2O60403 315 aa14.87□□□□□ -0.03
SPTLC2-201ENST00000216484 DGAT1O75907 488 aa14.87□□□□□ -0.03
SPTLC2-201ENST00000216484 HLA-DRAP01903 254 aa14.87□□□□□ -0.03
SPTLC2-201ENST00000216484 ZNF677Q86XU0 584 aa14.87□□□□□ -0.03
SPTLC2-201ENST00000216484 TPCN2Q8NHX9 752 aa14.87□□□□□ -0.03
SPTLC2-201ENST00000216484 AKAP7Q9P0M2 348 aaPredicted RBP14.87□□□□□ -0.03
SPTLC2-201ENST00000216484 DMGDHQ9UI17 866 aaKnown RBP14.87□□□□□ -0.03
SPTLC2-201ENST00000216484 NUP50Q9UKX7 468 aa14.87□□□□□ -0.03
SPTLC2-201ENST00000216484 SSR3Q9UNL2 185 aa14.87□□□□□ -0.03
SPTLC2-201ENST00000216484 PLEKHG1Q9ULL1 1385 aa14.87□□□□□ -0.03
SPTLC2-201ENST00000216484 CAPGP40121 348 aa14.87□□□□□ -0.03
SPTLC2-201ENST00000216484 SLC26A3P40879 764 aa14.87□□□□□ -0.03
SPTLC2-201ENST00000216484 KLHL23Q8NBE8 558 aa14.87□□□□□ -0.03
SPTLC2-201ENST00000216484 TMEM121Q9BTD3 319 aa14.87□□□□□ -0.03
SPTLC2-201ENST00000216484 CIDEBQ9UHD4 219 aa14.87□□□□□ -0.03
SPTLC2-201ENST00000216484 IL12AP29459 219 aa14.87□□□□□ -0.03
SPTLC2-201ENST00000216484 IL18R1Q13478 541 aa14.87□□□□□ -0.03
SPTLC2-201ENST00000216484 QRICH1Q2TAL8 776 aa14.87□□□□□ -0.03
SPTLC2-201ENST00000216484 RP9Q8TA86 221 aaKnown RBP14.87□□□□□ -0.03
SPTLC2-201ENST00000216484 PYDC1Q8WXC3 89 aa14.87□□□□□ -0.03
SPTLC2-201ENST00000216484 QTRT2Q9H974 415 aaKnown RBP14.87□□□□□ -0.03
SPTLC2-201ENST00000216484 DHRS7Q9Y394 339 aa14.87□□□□□ -0.03
SPTLC2-201ENST00000216484 SLC15A2Q16348 729 aa14.86□□□□□ -0.03
SPTLC2-201ENST00000216484 ZC2HC1CQ53FD0 456 aaPredicted RBP14.86□□□□□ -0.03
SPTLC2-201ENST00000216484 PRRG4Q9BZD6 226 aa14.86□□□□□ -0.03
SPTLC2-201ENST00000216484 L1RE1Q9UN81 338 aa14.86□□□□□ -0.03
SPTLC2-201ENST00000216484 IGSF9BQ9UPX0 1349 aa14.86□□□□□ -0.03
SPTLC2-201ENST00000216484 CHN2P52757 468 aa14.86□□□□□ -0.03
SPTLC2-201ENST00000216484 FBXO39Q8N4B4 442 aa14.86□□□□□ -0.03
SPTLC2-201ENST00000216484 EMC1Q8N766 993 aa14.86□□□□□ -0.03
SPTLC2-201ENST00000216484 IL17REQ8NFR9 667 aa14.86□□□□□ -0.03
SPTLC2-201ENST00000216484 PABPC3Q9H361 631 aaKnown RBP14.86□□□□□ -0.03
SPTLC2-201ENST00000216484 CHMP1AQ9HD42 196 aaPredicted RBP14.86□□□□□ -0.03
SPTLC2-201ENST00000216484 ARMCX1Q9P291 453 aa14.86□□□□□ -0.03
SPTLC2-201ENST00000216484 SERPINA1P01009 418 aa14.86□□□□□ -0.03
SPTLC2-201ENST00000216484 PAN2Q504Q3 1202 aaKnown RBP14.86□□□□□ -0.03
SPTLC2-201ENST00000216484 IL27RAQ6UWB1 636 aa14.86□□□□□ -0.03
SPTLC2-201ENST00000216484 GMCL1Q96IK5 515 aa14.86□□□□□ -0.03
SPTLC2-201ENST00000216484 GPN1Q9HCN4 374 aaPredicted RBP14.86□□□□□ -0.03
SPTLC2-201ENST00000216484 TAF6LQ9Y6J9 622 aa14.86□□□□□ -0.03
SPTLC2-201ENST00000216484 GTPBP1O00178 669 aaKnown RBP14.86□□□□□ -0.03
SPTLC2-201ENST00000216484 B3GAT3O94766 335 aa14.86□□□□□ -0.03
SPTLC2-201ENST00000216484 IFNA16P05015 189 aa14.86□□□□□ -0.03
SPTLC2-201ENST00000216484 CLK3P49761 638 aaKnown RBP14.86□□□□□ -0.03
SPTLC2-201ENST00000216484 SLC34A1Q06495 639 aa14.86□□□□□ -0.03
SPTLC2-201ENST00000216484 MAPK7Q13164 816 aa14.86□□□□□ -0.03
SPTLC2-201ENST00000216484 GRM4Q14833 912 aa14.86□□□□□ -0.03
SPTLC2-201ENST00000216484 ACAD10Q6JQN1 1059 aa14.86□□□□□ -0.03
SPTLC2-201ENST00000216484 ZSWIM2Q8NEG5 633 aa14.86□□□□□ -0.03
SPTLC2-201ENST00000216484 PHF10Q8WUB8 498 aaKnown RBP14.86□□□□□ -0.03
SPTLC2-201ENST00000216484 TMEM169Q96HH4 297 aa14.86□□□□□ -0.03
SPTLC2-201ENST00000216484 AIF1LQ9BQI0 150 aa14.86□□□□□ -0.03
SPTLC2-201ENST00000216484 BTBD10Q9BSF8 475 aa14.86□□□□□ -0.03
SPTLC2-201ENST00000216484 TMEM168Q9H0V1 697 aa14.86□□□□□ -0.03
SPTLC2-201ENST00000216484 CYP3A43Q9HB55 503 aa14.86□□□□□ -0.03
SPTLC2-201ENST00000216484 ORC1Q13415 861 aa14.86□□□□□ -0.03
SPTLC2-201ENST00000216484 GRAPQ13588 217 aa14.86□□□□□ -0.03
SPTLC2-201ENST00000216484 ZNHIT3Q15649 155 aaPredicted RBP14.86□□□□□ -0.03
SPTLC2-201ENST00000216484 ZIK1Q3SY52 487 aaPredicted RBP14.86□□□□□ -0.03
SPTLC2-201ENST00000216484 KDM7AQ6ZMT4 941 aa14.86□□□□□ -0.03
SPTLC2-201ENST00000216484 GRAPLQ8TC17 118 aaPredicted RBP14.86□□□□□ -0.03
SPTLC2-201ENST00000216484 SIPA1Q96FS4 1042 aa14.86□□□□□ -0.03
SPTLC2-201ENST00000216484 FICDQ9BVA6 458 aa14.86□□□□□ -0.03
SPTLC2-201ENST00000216484 A0A088AWK7 358 aa14.86□□□□□ -0.03
SPTLC2-201ENST00000216484 ANKDD1BA6NHY2 528 aa14.86□□□□□ -0.03
SPTLC2-201ENST00000216484 RSL1D1O76021 490 aaKnown RBP14.86□□□□□ -0.03
SPTLC2-201ENST00000216484 ZNF10P21506 573 aaPredicted RBP14.86□□□□□ -0.03
SPTLC2-201ENST00000216484 CBX3Q13185 183 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms