RNA–Protein interactions for RNA: ENST00000023939.8

RTFDC1-201, Transcript of Protein RTF2 homolog, humanhuman

TSL 2 BASIC

Gene RTFDC1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-201ENST00000023939 KCNK9Q9NPC2 374 aa14.69□□□□□ -0.06
RTFDC1-201ENST00000023939 NKIRAS1Q9NYS0 192 aa14.69□□□□□ -0.06
RTFDC1-201ENST00000023939 SEPT10Q9P0V9 454 aa14.69□□□□□ -0.06
RTFDC1-201ENST00000023939 HS3ST4Q9Y661 456 aa14.69□□□□□ -0.06
RTFDC1-201ENST00000023939 COL4A6Q14031 1691 aa14.68□□□□□ -0.06
RTFDC1-201ENST00000023939 CARNS1A5YM72 827 aa14.68□□□□□ -0.06
RTFDC1-201ENST00000023939 SDR42E2A6NKP2 422 aa14.68□□□□□ -0.06
RTFDC1-201ENST00000023939 FOXO6A8MYZ6 492 aa14.68□□□□□ -0.06
RTFDC1-201ENST00000023939 E9PAM4 449 aa14.68□□□□□ -0.06
RTFDC1-201ENST00000023939 EBAG9O00559 213 aa14.68□□□□□ -0.06
RTFDC1-201ENST00000023939 IGLV3-27P01718 113 aa14.68□□□□□ -0.06
RTFDC1-201ENST00000023939 PBX3P40426 434 aa14.68□□□□□ -0.06
RTFDC1-201ENST00000023939 ARPP19P56211 112 aa14.68□□□□□ -0.06
RTFDC1-201ENST00000023939 RING1Q06587 406 aa14.68□□□□□ -0.06
RTFDC1-201ENST00000023939 TAF10Q12962 218 aa14.68□□□□□ -0.06
RTFDC1-201ENST00000023939 MGAT5BQ3V5L5 792 aa14.68□□□□□ -0.06
RTFDC1-201ENST00000023939 KBTBD12Q3ZCT8 623 aa14.68□□□□□ -0.06
RTFDC1-201ENST00000023939 FAM182AQ5T1J6 154 aa14.68□□□□□ -0.06
RTFDC1-201ENST00000023939 NUGGCQ68CJ6 796 aa14.68□□□□□ -0.06
RTFDC1-201ENST00000023939 KCTD11Q693B1 232 aa14.68□□□□□ -0.06
RTFDC1-201ENST00000023939 RWDD4Q6NW29 188 aaKnown RBP14.68□□□□□ -0.06
RTFDC1-201ENST00000023939 SLC26A11Q86WA9 606 aa14.68□□□□□ -0.06
RTFDC1-201ENST00000023939 ZNF683Q8IZ20 524 aa14.68□□□□□ -0.06
RTFDC1-201ENST00000023939 RTL3Q8N8U3 475 aaKnown RBP14.68□□□□□ -0.06
RTFDC1-201ENST00000023939 FBXO22Q8NEZ5 403 aa14.68□□□□□ -0.06
RTFDC1-201ENST00000023939 CKAP2Q8WWK9 683 aa14.68□□□□□ -0.06
RTFDC1-201ENST00000023939 ALKBH8Q96BT7 664 aaKnown RBP14.68□□□□□ -0.06
RTFDC1-201ENST00000023939 CFAP36Q96G28 342 aa14.68□□□□□ -0.06
RTFDC1-201ENST00000023939 TEKT5Q96M29 485 aa14.68□□□□□ -0.06
RTFDC1-201ENST00000023939 SMC6Q96SB8 1091 aa14.68□□□□□ -0.06
RTFDC1-201ENST00000023939 SEPT5Q99719 369 aaPredicted RBP14.68□□□□□ -0.06
RTFDC1-201ENST00000023939 PRMT1Q99873 361 aaKnown RBP14.68□□□□□ -0.06
RTFDC1-201ENST00000023939 DONSONQ9NYP3 566 aa14.68□□□□□ -0.06
RTFDC1-201ENST00000023939 PPARGC1AQ9UBK2 798 aaKnown RBP14.68□□□□□ -0.06
RTFDC1-201ENST00000023939 SLC27A5Q9Y2P5 690 aa14.68□□□□□ -0.06
RTFDC1-201ENST00000023939 PCDHA11Q9Y5I1 949 aa14.68□□□□□ -0.06
RTFDC1-201ENST00000023939 CENPFP49454 3210 aa14.67□□□□□ -0.06
RTFDC1-201ENST00000023939 IQANK1A0A1B0GTG1 560 aa14.67□□□□□ -0.06
RTFDC1-201ENST00000023939 FAM159BA6NKW6 160 aa14.67□□□□□ -0.06
RTFDC1-201ENST00000023939 TYROBPO43914 113 aa14.67□□□□□ -0.06
RTFDC1-201ENST00000023939 ALDH1A2O94788 518 aa14.67□□□□□ -0.06
RTFDC1-201ENST00000023939 AP2A1O95782 977 aa14.67□□□□□ -0.06
RTFDC1-201ENST00000023939 CLTBP09497 229 aa14.67□□□□□ -0.06
RTFDC1-201ENST00000023939 SRGAP2BP0DMP2 458 aa14.67□□□□□ -0.06
RTFDC1-201ENST00000023939 CD68P34810 354 aaPredicted RBP14.67□□□□□ -0.06
RTFDC1-201ENST00000023939 GRIA1P42261 906 aa14.67□□□□□ -0.06
RTFDC1-201ENST00000023939 TUFMP49411 452 aaKnown RBP14.67□□□□□ -0.06
RTFDC1-201ENST00000023939 TUBP50607 506 aa14.67□□□□□ -0.06
RTFDC1-201ENST00000023939 KPNA1P52294 538 aaPredicted RBP14.67□□□□□ -0.06
RTFDC1-201ENST00000023939 DUSP4Q13115 394 aa14.67□□□□□ -0.06
RTFDC1-201ENST00000023939 ZNF449Q6P9G9 518 aa14.67□□□□□ -0.06
RTFDC1-201ENST00000023939 PRSS55Q6UWB4 352 aaPredicted RBP14.67□□□□□ -0.06
RTFDC1-201ENST00000023939 LRRC6Q86X45 466 aa14.67□□□□□ -0.06
RTFDC1-201ENST00000023939 FATE1Q969F0 183 aa14.67□□□□□ -0.06
RTFDC1-201ENST00000023939 TOP1MTQ969P6 601 aa14.67□□□□□ -0.06
RTFDC1-201ENST00000023939 ARMC5Q96C12 935 aa14.67□□□□□ -0.06
RTFDC1-201ENST00000023939 ZNF689Q96CS4 500 aaPredicted RBP14.67□□□□□ -0.06
RTFDC1-201ENST00000023939 STAMBPL1Q96FJ0 436 aa14.67□□□□□ -0.06
RTFDC1-201ENST00000023939 GORASP1Q9BQQ3 440 aa14.67□□□□□ -0.06
RTFDC1-201ENST00000023939 VN1R3Q9BXE9 311 aa14.67□□□□□ -0.06
RTFDC1-201ENST00000023939 UBE2OQ9C0C9 1292 aaKnown RBP14.67□□□□□ -0.06
RTFDC1-201ENST00000023939 RABEP2Q9H5N1 569 aa14.67□□□□□ -0.06
RTFDC1-201ENST00000023939 TMEM39AQ9NV64 488 aa14.67□□□□□ -0.06
RTFDC1-201ENST00000023939 MOCS1Q9NZB8 636 aa14.67□□□□□ -0.06
RTFDC1-201ENST00000023939 NUDT5Q9UKK9 219 aa14.67□□□□□ -0.06
RTFDC1-201ENST00000023939 CDY1Q9Y6F8 540 aa14.67□□□□□ -0.06
RTFDC1-201ENST00000023939 LTBP2Q14767 1821 aa14.67□□□□□ -0.06
RTFDC1-201ENST00000023939 IGLV3-10A0A075B6K4 115 aa14.66□□□□□ -0.06
RTFDC1-201ENST00000023939 WDR27A2RRH5 827 aa14.66□□□□□ -0.06
RTFDC1-201ENST00000023939 ZBTB24O43167 697 aaPredicted RBP14.66□□□□□ -0.06
RTFDC1-201ENST00000023939 PSMD3O43242 534 aa14.66□□□□□ -0.06
RTFDC1-201ENST00000023939 SOAT2O75908 522 aa14.66□□□□□ -0.06
RTFDC1-201ENST00000023939 INHBAP08476 426 aa14.66□□□□□ -0.06
RTFDC1-201ENST00000023939 ZBTB17Q13105 803 aa14.66□□□□□ -0.06
RTFDC1-201ENST00000023939 PSMD5Q16401 504 aa14.66□□□□□ -0.06
RTFDC1-201ENST00000023939 RASIP1Q5U651 963 aa14.66□□□□□ -0.06
RTFDC1-201ENST00000023939 PIK3R6Q5UE93 754 aa14.66□□□□□ -0.06
RTFDC1-201ENST00000023939 SNX30Q5VWJ9 437 aa14.66□□□□□ -0.06
RTFDC1-201ENST00000023939 PRPF39Q86UA1 669 aaKnown RBP14.66□□□□□ -0.06
RTFDC1-201ENST00000023939 MPP5Q8N3R9 675 aa14.66□□□□□ -0.06
RTFDC1-201ENST00000023939 DNAJC5GQ8N7S2 189 aa14.66□□□□□ -0.06
RTFDC1-201ENST00000023939 ATP6V0D2Q8N8Y2 350 aa14.66□□□□□ -0.06
RTFDC1-201ENST00000023939 STKLD1Q8NE28 680 aa14.66□□□□□ -0.06
RTFDC1-201ENST00000023939 DIS3LQ8TF46 1054 aaKnown RBP14.66□□□□□ -0.06
RTFDC1-201ENST00000023939 OVCA2Q8WZ82 227 aa14.66□□□□□ -0.06
RTFDC1-201ENST00000023939 BTN2A3PQ96KV6 586 aa14.66□□□□□ -0.06
RTFDC1-201ENST00000023939 CDK5RAP1Q96SZ6 601 aaKnown RBP14.66□□□□□ -0.06
RTFDC1-201ENST00000023939 IL12RB2Q99665 862 aa14.66□□□□□ -0.06
RTFDC1-201ENST00000023939 RC3H2Q9HBD1 1191 aaKnown RBP14.66□□□□□ -0.06
RTFDC1-201ENST00000023939 PRDM5Q9NQX1 630 aaPredicted RBP14.66□□□□□ -0.06
RTFDC1-201ENST00000023939 MARCH2Q9P0N8 246 aa14.66□□□□□ -0.06
RTFDC1-201ENST00000023939 AFF4Q9UHB7 1163 aaKnown RBP14.66□□□□□ -0.06
RTFDC1-201ENST00000023939 RSPH14Q9UHP6 348 aa14.66□□□□□ -0.06
RTFDC1-201ENST00000023939 IKBKGQ9Y6K9 419 aa14.66□□□□□ -0.06
RTFDC1-201ENST00000023939 ATXN2Q99700 1313 aaKnown RBP14.66□□□□□ -0.06
RTFDC1-201ENST00000023939 DNAH12Q6ZR08 3092 aa14.66□□□□□ -0.06
RTFDC1-201ENST00000023939 SLC38A8A6NNN8 435 aa14.66□□□□□ -0.06
RTFDC1-201ENST00000023939 AP3B1O00203 1094 aa14.66□□□□□ -0.06
RTFDC1-201ENST00000023939 EFCAB14O75071 495 aa14.66□□□□□ -0.06
RTFDC1-201ENST00000023939 RHOQP17081 205 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms