RNA–Protein interactions for RNA: ENST00000641242.1

AP000553.6-201, humanhuman

BASIC

Gene AP000553.6, Length 118 nt, Biotype unitary pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000553.6-201ENST00000641242 XRCC4Q13426 336 aa3.8□□□□□ -1.8
AP000553.6-201ENST00000641242 SLC12A1Q13621 1099 aa3.8□□□□□ -1.8
AP000553.6-201ENST00000641242 HTR4Q13639 388 aa3.8□□□□□ -1.8
AP000553.6-201ENST00000641242 AUHQ13825 339 aaKnown RBP3.8□□□□□ -1.8
AP000553.6-201ENST00000641242 DHX34Q14147 1143 aaKnown RBP3.8□□□□□ -1.8
AP000553.6-201ENST00000641242 PAFAH1B3Q15102 231 aaKnown RBP3.8□□□□□ -1.8
AP000553.6-201ENST00000641242 PDK1Q15118 436 aa3.8□□□□□ -1.8
AP000553.6-201ENST00000641242 NOMO1Q15155 1222 aa3.8□□□□□ -1.8
AP000553.6-201ENST00000641242 E2F5Q15329 346 aa3.8□□□□□ -1.8
AP000553.6-201ENST00000641242 SMAD2Q15796 467 aaKnown RBP3.8□□□□□ -1.8
AP000553.6-201ENST00000641242 CA9Q16790 459 aa3.8□□□□□ -1.8
AP000553.6-201ENST00000641242 LONRF2Q1L5Z9 754 aa3.8□□□□□ -1.8
AP000553.6-201ENST00000641242 ANO4Q32M45 955 aa3.8□□□□□ -1.8
AP000553.6-201ENST00000641242 LEXMQ3ZCV2 418 aa3.8□□□□□ -1.8
AP000553.6-201ENST00000641242 C5orf22Q49AR2 442 aa3.8□□□□□ -1.8
AP000553.6-201ENST00000641242 PREPLQ4J6C6 727 aaPredicted RBP3.8□□□□□ -1.8
AP000553.6-201ENST00000641242 MPPE1Q53F39 396 aa3.8□□□□□ -1.8
AP000553.6-201ENST00000641242 ANKRD20A8PQ5CZ79 823 aa3.8□□□□□ -1.8
AP000553.6-201ENST00000641242 FAM78AQ5JUQ0 283 aa3.8□□□□□ -1.8
AP000553.6-201ENST00000641242 TMCO4Q5TGY1 634 aa3.8□□□□□ -1.8
AP000553.6-201ENST00000641242 RAP1GAP2Q684P5 730 aa3.8□□□□□ -1.8
AP000553.6-201ENST00000641242 RNF43Q68DV7 783 aa3.8□□□□□ -1.8
AP000553.6-201ENST00000641242 TXNRD3NBQ6F5E7 133 aa3.8□□□□□ -1.8
AP000553.6-201ENST00000641242 NADSYN1Q6IA69 706 aa3.8□□□□□ -1.8
AP000553.6-201ENST00000641242 TIGD7Q6NT04 549 aaPredicted RBP3.8□□□□□ -1.8
AP000553.6-201ENST00000641242 RWDD4Q6NW29 188 aaKnown RBP3.8□□□□□ -1.8
AP000553.6-201ENST00000641242 DRICH1Q6PGQ1 229 aaPredicted RBP3.8□□□□□ -1.8
AP000553.6-201ENST00000641242 MFSD7Q6UXD7 560 aa3.8□□□□□ -1.8
AP000553.6-201ENST00000641242 ZNF783Q6ZMS7 281 aa3.8□□□□□ -1.8
AP000553.6-201ENST00000641242 SYDE1Q6ZW31 735 aaPredicted RBP3.8□□□□□ -1.8
AP000553.6-201ENST00000641242 Q7L0L9 218 aa3.8□□□□□ -1.8
AP000553.6-201ENST00000641242 SETD3Q86TU7 594 aaPredicted RBP3.8□□□□□ -1.8
AP000553.6-201ENST00000641242 METTL3Q86U44 580 aaKnown RBP3.8□□□□□ -1.8
AP000553.6-201ENST00000641242 CTAGE6Q86UF2 777 aa3.8□□□□□ -1.8
AP000553.6-201ENST00000641242 CPNE8Q86YQ8 564 aa3.8□□□□□ -1.8
AP000553.6-201ENST00000641242 ARID3BQ8IVW6 561 aaPredicted RBP3.8□□□□□ -1.8
AP000553.6-201ENST00000641242 MFN1Q8IWA4 741 aa3.8□□□□□ -1.8
AP000553.6-201ENST00000641242 BBS7Q8IWZ6 715 aa3.8□□□□□ -1.8
AP000553.6-201ENST00000641242 CTAGE4Q8IX94 777 aa3.8□□□□□ -1.8
AP000553.6-201ENST00000641242 LGI2Q8N0V4 545 aa3.8□□□□□ -1.8
AP000553.6-201ENST00000641242 UMODL1-AS1Q8N2C9 162 aa3.8□□□□□ -1.8
AP000553.6-201ENST00000641242 PYROXD2Q8N2H3 581 aa3.8□□□□□ -1.8
AP000553.6-201ENST00000641242 PLCD3Q8N3E9 789 aa3.8□□□□□ -1.8
AP000553.6-201ENST00000641242 DCAF4L2Q8NA75 395 aa3.8□□□□□ -1.8
AP000553.6-201ENST00000641242 TTC16Q8NEE8 873 aa3.8□□□□□ -1.8
AP000553.6-201ENST00000641242 CCHCR1Q8TD31 782 aa3.8□□□□□ -1.8
AP000553.6-201ENST00000641242 BPIFB1Q8TDL5 484 aa3.8□□□□□ -1.8
AP000553.6-201ENST00000641242 ADAMTS19Q8TE59 1207 aa3.8□□□□□ -1.8
AP000553.6-201ENST00000641242 COG1Q8WTW3 980 aa3.8□□□□□ -1.8
AP000553.6-201ENST00000641242 OSCP1Q8WVF1 389 aa3.8□□□□□ -1.8
AP000553.6-201ENST00000641242 RAPGEF5Q92565 580 aa3.8□□□□□ -1.8
AP000553.6-201ENST00000641242 RUBCNQ92622 972 aa3.8□□□□□ -1.8
AP000553.6-201ENST00000641242 P3H4Q92791 437 aa3.8□□□□□ -1.8
AP000553.6-201ENST00000641242 NKD2Q969F2 451 aaPredicted RBP3.8□□□□□ -1.8
AP000553.6-201ENST00000641242 NXPE3Q969Y0 559 aa3.8□□□□□ -1.8
AP000553.6-201ENST00000641242 EXOC4Q96A65 974 aa3.8□□□□□ -1.8
AP000553.6-201ENST00000641242 RNF25Q96BH1 459 aaPredicted RBP3.8□□□□□ -1.8
AP000553.6-201ENST00000641242 ELSPBP1Q96BH3 223 aa3.8□□□□□ -1.8
AP000553.6-201ENST00000641242 MSANTD3Q96H12 275 aa3.8□□□□□ -1.8
AP000553.6-201ENST00000641242 CAPZA3Q96KX2 299 aa3.8□□□□□ -1.8
AP000553.6-201ENST00000641242 PPP1R2P1Q96PQ5 205 aa3.8□□□□□ -1.8
AP000553.6-201ENST00000641242 QKIQ96PU8 341 aaKnown RBP eCLIP3.8□□□□□ -1.8
AP000553.6-201ENST00000641242 RNF157Q96PX1 679 aa3.8□□□□□ -1.8
AP000553.6-201ENST00000641242 SLC22A12Q96S37 553 aa3.8□□□□□ -1.8
AP000553.6-201ENST00000641242 PRMT1Q99873 361 aaKnown RBP3.8□□□□□ -1.8
AP000553.6-201ENST00000641242 C2orf49Q9BVC5 232 aaPredicted RBP3.8□□□□□ -1.8
AP000553.6-201ENST00000641242 APOL5Q9BWW9 433 aa3.8□□□□□ -1.8
AP000553.6-201ENST00000641242 PHF7Q9BWX1 381 aaPredicted RBP3.8□□□□□ -1.8
AP000553.6-201ENST00000641242 SLC46A2Q9BY10 475 aa3.8□□□□□ -1.8
AP000553.6-201ENST00000641242 SLC2A11Q9BYW1 496 aa3.8□□□□□ -1.8
AP000553.6-201ENST00000641242 RNF38Q9H0F5 515 aa3.8□□□□□ -1.8
AP000553.6-201ENST00000641242 SIK2Q9H0K1 926 aa3.8□□□□□ -1.8
AP000553.6-201ENST00000641242 POMKQ9H5K3 350 aa3.8□□□□□ -1.8
AP000553.6-201ENST00000641242 TMEM248Q9NWD8 314 aa3.8□□□□□ -1.8
AP000553.6-201ENST00000641242 CWC15Q9P013 229 aaKnown RBP3.8□□□□□ -1.8
AP000553.6-201ENST00000641242 MARK1Q9P0L2 795 aa3.8□□□□□ -1.8
AP000553.6-201ENST00000641242 THEGQ9P2T0 379 aa3.8□□□□□ -1.8
AP000553.6-201ENST00000641242 FEZ2Q9UHY8 353 aaPredicted RBP3.8□□□□□ -1.8
AP000553.6-201ENST00000641242 AGO1Q9UL18 857 aaKnown RBP3.8□□□□□ -1.8
AP000553.6-201ENST00000641242 VANGL2Q9ULK5 521 aa3.8□□□□□ -1.8
AP000553.6-201ENST00000641242 CCL26Q9Y258 94 aa3.8□□□□□ -1.8
AP000553.6-201ENST00000641242 COL4A2P08572 1712 aa3.79□□□□□ -1.8
AP000553.6-201ENST00000641242 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP3.79□□□□□ -1.8
AP000553.6-201ENST00000641242 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP3.79□□□□□ -1.8
AP000553.6-201ENST00000641242 ILVBLA1L0T0 632 aa3.79□□□□□ -1.8
AP000553.6-201ENST00000641242 GRXCR2A6NFK2 248 aa3.79□□□□□ -1.8
AP000553.6-201ENST00000641242 ZSCAN5CA6NGD5 496 aaPredicted RBP3.79□□□□□ -1.8
AP000553.6-201ENST00000641242 DRGXA6NNA5 263 aa3.79□□□□□ -1.8
AP000553.6-201ENST00000641242 HEPACAM2A8MVW5 462 aa3.79□□□□□ -1.8
AP000553.6-201ENST00000641242 ANHXE9PGG2 379 aa3.79□□□□□ -1.8
AP000553.6-201ENST00000641242 NEDD8-MDP1E9PL57 170 aa3.79□□□□□ -1.8
AP000553.6-201ENST00000641242 FAM72CH0Y354 149 aa3.79□□□□□ -1.8
AP000553.6-201ENST00000641242 H0Y626 953 aa3.79□□□□□ -1.8
AP000553.6-201ENST00000641242 I6L893 689 aaPredicted RBP3.79□□□□□ -1.8
AP000553.6-201ENST00000641242 GFRA2O00451 464 aa3.79□□□□□ -1.8
AP000553.6-201ENST00000641242 CHADO15335 359 aa3.79□□□□□ -1.8
AP000553.6-201ENST00000641242 MBTPS2O43462 519 aa3.79□□□□□ -1.8
AP000553.6-201ENST00000641242 LIASO43766 372 aa3.79□□□□□ -1.8
AP000553.6-201ENST00000641242 GREM1O60565 184 aa3.79□□□□□ -1.8
AP000553.6-201ENST00000641242 CST8O60676 142 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms