RNA–Protein interactions for RNA: ENST00000640421.1

SPIN3-238, Transcript of spindlin family member 3, human

TSL 5

Gene SPIN3, Length 1,872 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIN3-238	ENST00000640421	WEE1	P30291	646 aa		18.3	■□□□□ 0.52
SPIN3-238	ENST00000640421	GBE1	Q04446	702 aa		18.3	■□□□□ 0.52
SPIN3-238	ENST00000640421	CKAP4	Q07065	602 aa	Known RBP	18.3	■□□□□ 0.52
SPIN3-238	ENST00000640421	SLC10A2	Q12908	348 aa	Predicted RBP	18.3	■□□□□ 0.52
SPIN3-238	ENST00000640421	TP53INP2	Q8IXH6	220 aa		18.3	■□□□□ 0.52
SPIN3-238	ENST00000640421	FAM217A	Q8IXS0	508 aa		18.3	■□□□□ 0.52
SPIN3-238	ENST00000640421	CFAP52	Q8N1V2	620 aa		18.3	■□□□□ 0.52
SPIN3-238	ENST00000640421	NPW	Q8N729	165 aa		18.3	■□□□□ 0.52
SPIN3-238	ENST00000640421	C1orf54	Q8WWF1	131 aa		18.3	■□□□□ 0.52
SPIN3-238	ENST00000640421	NAP1L3	Q99457	506 aa	Predicted RBP	18.3	■□□□□ 0.52
SPIN3-238	ENST00000640421	GDE1	Q9NZC3	331 aa		18.3	■□□□□ 0.52
SPIN3-238	ENST00000640421	CD207	Q9UJ71	328 aa		18.3	■□□□□ 0.52
SPIN3-238	ENST00000640421	LSM7	Q9UK45	103 aa	Known RBP	18.3	■□□□□ 0.52
SPIN3-238	ENST00000640421	E2F8	A0AVK6	867 aa		18.29	■□□□□ 0.52
SPIN3-238	ENST00000640421	GRXCR2	A6NFK2	248 aa		18.29	■□□□□ 0.52
SPIN3-238	ENST00000640421	DRGX	A6NNA5	263 aa		18.29	■□□□□ 0.52
SPIN3-238	ENST00000640421	APOL1	O14791	398 aa		18.29	■□□□□ 0.52
SPIN3-238	ENST00000640421	DAPK3	O43293	454 aa		18.29	■□□□□ 0.52
SPIN3-238	ENST00000640421	TSPAN3	O60637	253 aa		18.29	■□□□□ 0.52
SPIN3-238	ENST00000640421	LATS1	O95835	1130 aa		18.29	■□□□□ 0.52
SPIN3-238	ENST00000640421	MTHFR	P42898	656 aa		18.29	■□□□□ 0.52
SPIN3-238	ENST00000640421	ZNF135	P52742	658 aa	Predicted RBP	18.29	■□□□□ 0.52
SPIN3-238	ENST00000640421	RPS24	P62847	133 aa	Known RBP	18.29	■□□□□ 0.52
SPIN3-238	ENST00000640421	MTA1	Q13330	715 aa		18.29	■□□□□ 0.52
SPIN3-238	ENST00000640421	TFDP2	Q14188	446 aa		18.29	■□□□□ 0.52
SPIN3-238	ENST00000640421	C5orf22	Q49AR2	442 aa		18.29	■□□□□ 0.52
SPIN3-238	ENST00000640421	C1orf228	Q6PIY5	440 aa		18.29	■□□□□ 0.52
SPIN3-238	ENST00000640421	NLRP14	Q86W24	1093 aa		18.29	■□□□□ 0.52
SPIN3-238	ENST00000640421	DDX42	Q86XP3	938 aa	Known RBP eCLIP	18.29	■□□□□ 0.52
SPIN3-238	ENST00000640421	TRAF3IP1	Q8TDR0	691 aa	Predicted RBP	18.29	■□□□□ 0.52
SPIN3-238	ENST00000640421	SMARCD2	Q92925	531 aa		18.29	■□□□□ 0.52
SPIN3-238	ENST00000640421	RPRD1A	Q96P16	312 aa	Predicted RBP	18.29	■□□□□ 0.52
SPIN3-238	ENST00000640421	UBE2Z	Q9H832	354 aa	Predicted RBP	18.29	■□□□□ 0.52
SPIN3-238	ENST00000640421	PPARGC1A	Q9UBK2	798 aa	Known RBP	18.29	■□□□□ 0.52
SPIN3-238	ENST00000640421	ZNF212	Q9UDV6	495 aa		18.29	■□□□□ 0.52
SPIN3-238	ENST00000640421	NUP205	Q92621	2012 aa		18.29	■□□□□ 0.52
SPIN3-238	ENST00000640421		F5H5T6	163 aa		18.29	■□□□□ 0.52
SPIN3-238	ENST00000640421	APOC4-APOC2	K7ER74	178 aa		18.29	■□□□□ 0.52
SPIN3-238	ENST00000640421	MFSD11	O43934	449 aa		18.29	■□□□□ 0.52
SPIN3-238	ENST00000640421	APOC2	P02655	101 aa		18.29	■□□□□ 0.52
SPIN3-238	ENST00000640421	TCF3	P15923	654 aa		18.29	■□□□□ 0.52
SPIN3-238	ENST00000640421	OTUD4	Q01804	1114 aa	Known RBP	18.29	■□□□□ 0.52
SPIN3-238	ENST00000640421	TFAP2D	Q7Z6R9	452 aa		18.29	■□□□□ 0.52
SPIN3-238	ENST00000640421	CCDC33	Q8N5R6	958 aa		18.29	■□□□□ 0.52
SPIN3-238	ENST00000640421	NOA1	Q8NC60	698 aa	Known RBP	18.29	■□□□□ 0.52
SPIN3-238	ENST00000640421	ACTL9	Q8TC94	416 aa		18.29	■□□□□ 0.52
SPIN3-238	ENST00000640421	KLC2	Q9H0B6	622 aa		18.29	■□□□□ 0.52
SPIN3-238	ENST00000640421	HEY1	Q9Y5J3	304 aa		18.29	■□□□□ 0.52
SPIN3-238	ENST00000640421	ZFP37	Q9Y6Q3	630 aa	Predicted RBP	18.29	■□□□□ 0.52
SPIN3-238	ENST00000640421	HTR7	P34969	479 aa		18.28	■□□□□ 0.52
SPIN3-238	ENST00000640421	TTC27	Q6P3X3	843 aa		18.28	■□□□□ 0.52
SPIN3-238	ENST00000640421	LRRC31	Q6UY01	552 aa		18.28	■□□□□ 0.52
SPIN3-238	ENST00000640421	CELF5	Q8N6W0	485 aa	Known RBP	18.28	■□□□□ 0.52
SPIN3-238	ENST00000640421	CEP112	Q8N8E3	955 aa		18.28	■□□□□ 0.52
SPIN3-238	ENST00000640421	ZYG11B	Q9C0D3	744 aa		18.28	■□□□□ 0.52
SPIN3-238	ENST00000640421	DDX47	Q9H0S4	455 aa	Known RBP	18.28	■□□□□ 0.52
SPIN3-238	ENST00000640421	LINC00597	Q9H2U6	94 aa		18.28	■□□□□ 0.52
SPIN3-238	ENST00000640421	TRPV4	Q9HBA0	871 aa		18.28	■□□□□ 0.52
SPIN3-238	ENST00000640421	MYOF	Q9NZM1	2061 aa		18.28	■□□□□ 0.52
SPIN3-238	ENST00000640421	CTAGE15	A4D2H0	777 aa		18.27	■□□□□ 0.52
SPIN3-238	ENST00000640421	CTAGE8	P0CG41	777 aa		18.27	■□□□□ 0.52
SPIN3-238	ENST00000640421	PAFAH1B3	Q15102	231 aa	Known RBP	18.27	■□□□□ 0.52
SPIN3-238	ENST00000640421	SKIV2L	Q15477	1246 aa	Known RBP	18.27	■□□□□ 0.52
SPIN3-238	ENST00000640421	CYP1B1	Q16678	543 aa		18.27	■□□□□ 0.52
SPIN3-238	ENST00000640421	ACBD5	Q5T8D3	534 aa	Predicted RBP	18.27	■□□□□ 0.52
SPIN3-238	ENST00000640421	TANGO2	Q6ICL3	276 aa		18.27	■□□□□ 0.52
SPIN3-238	ENST00000640421	B4GALNT4	Q76KP1	1039 aa		18.27	■□□□□ 0.52
SPIN3-238	ENST00000640421	CTAGE6	Q86UF2	777 aa		18.27	■□□□□ 0.52
SPIN3-238	ENST00000640421	CTAGE4	Q8IX94	777 aa		18.27	■□□□□ 0.52
SPIN3-238	ENST00000640421	LRRN4	Q8WUT4	740 aa		18.27	■□□□□ 0.52
SPIN3-238	ENST00000640421	KIF9	Q9HAQ2	790 aa		18.27	■□□□□ 0.52
SPIN3-238	ENST00000640421	DTL	Q9NZJ0	730 aa		18.27	■□□□□ 0.52
SPIN3-238	ENST00000640421	FGF10	O15520	208 aa	Predicted RBP	18.26	■□□□□ 0.51
SPIN3-238	ENST00000640421	TGM2	P21980	687 aa		18.26	■□□□□ 0.51
SPIN3-238	ENST00000640421	SP100	P23497	879 aa	Predicted RBP	18.26	■□□□□ 0.51
SPIN3-238	ENST00000640421	GBP2	P32456	591 aa	Predicted RBP	18.26	■□□□□ 0.51
SPIN3-238	ENST00000640421	SNX1	Q13596	522 aa		18.26	■□□□□ 0.51
SPIN3-238	ENST00000640421	TMCO3	Q6UWJ1	677 aa		18.26	■□□□□ 0.51
SPIN3-238	ENST00000640421	RTL3	Q8N8U3	475 aa	Known RBP	18.26	■□□□□ 0.51
SPIN3-238	ENST00000640421	MAIP1	Q8WWC4	291 aa		18.26	■□□□□ 0.51
SPIN3-238	ENST00000640421	BHMT	Q93088	406 aa		18.26	■□□□□ 0.51
SPIN3-238	ENST00000640421	ASIC4	Q96FT7	647 aa		18.26	■□□□□ 0.51
SPIN3-238	ENST00000640421	STIM2	Q9P246	746 aa		18.26	■□□□□ 0.51
SPIN3-238	ENST00000640421	DNPEP	Q9ULA0	475 aa		18.26	■□□□□ 0.51
SPIN3-238	ENST00000640421	ZNF510	Q9Y2H8	683 aa		18.26	■□□□□ 0.51
SPIN3-238	ENST00000640421	WNT6	Q9Y6F9	365 aa		18.26	■□□□□ 0.51
SPIN3-238	ENST00000640421	KIF26A	Q9ULI4	1882 aa	Predicted RBP	18.26	■□□□□ 0.51
SPIN3-238	ENST00000640421	LAMP2	P13473	410 aa		18.26	■□□□□ 0.51
SPIN3-238	ENST00000640421	RHOQ	P17081	205 aa		18.26	■□□□□ 0.51
SPIN3-238	ENST00000640421	KCNJ1	P48048	391 aa		18.26	■□□□□ 0.51
SPIN3-238	ENST00000640421	MRPS25	P82663	173 aa	Known RBP	18.26	■□□□□ 0.51
SPIN3-238	ENST00000640421	NOMO1	Q15155	1222 aa		18.26	■□□□□ 0.51
SPIN3-238	ENST00000640421	KLHL7	Q8IXQ5	586 aa		18.26	■□□□□ 0.51
SPIN3-238	ENST00000640421	CPXM2	Q8N436	756 aa		18.26	■□□□□ 0.51
SPIN3-238	ENST00000640421	C12orf50	Q8NA57	414 aa	Predicted RBP	18.26	■□□□□ 0.51
SPIN3-238	ENST00000640421	MNS1	Q8NEH6	495 aa		18.26	■□□□□ 0.51
SPIN3-238	ENST00000640421	P3H4	Q92791	437 aa		18.26	■□□□□ 0.51
SPIN3-238	ENST00000640421	CELF6	Q96J87	481 aa	Known RBP	18.26	■□□□□ 0.51
SPIN3-238	ENST00000640421	NOL6	Q9H6R4	1146 aa	Known RBP	18.26	■□□□□ 0.51
SPIN3-238	ENST00000640421	CATSPERB	Q9H7T0	1116 aa		18.26	■□□□□ 0.51

Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms