RNA–Protein interactions for RNA: ENST00000638016.1

PNKP-230, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 109 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-230ENST00000638016 NOX5Q96PH1 765 aa18.34■□□□□ 0.53
PNKP-230ENST00000638016 DDX50Q9BQ39 737 aaKnown RBP18.34■□□□□ 0.53
PNKP-230ENST00000638016 STK33Q9BYT3 514 aa18.34■□□□□ 0.53
PNKP-230ENST00000638016 PRSS16Q9NQE7 514 aa18.34■□□□□ 0.53
PNKP-230ENST00000638016 TMPRSS4Q9NRS4 437 aa18.34■□□□□ 0.53
PNKP-230ENST00000638016 ANO10Q9NW15 660 aa18.34■□□□□ 0.53
PNKP-230ENST00000638016 SIK3Q9Y2K2 1263 aa18.34■□□□□ 0.53
PNKP-230ENST00000638016 CEP83Q9Y592 693 aa18.34■□□□□ 0.53
PNKP-230ENST00000638016 GOLGA6L22H0YM25 854 aa18.33■□□□□ 0.52
PNKP-230ENST00000638016 M0QYT0 321 aa18.33■□□□□ 0.52
PNKP-230ENST00000638016 TIMM44O43615 452 aa18.33■□□□□ 0.52
PNKP-230ENST00000638016 CFIP05156 583 aa18.33■□□□□ 0.52
PNKP-230ENST00000638016 GLI1P08151 1106 aa18.33■□□□□ 0.52
PNKP-230ENST00000638016 POLR2EP19388 210 aaKnown RBP18.33■□□□□ 0.52
PNKP-230ENST00000638016 CD6P30203 668 aa18.33■□□□□ 0.52
PNKP-230ENST00000638016 MAPK8P45983 427 aa18.33■□□□□ 0.52
PNKP-230ENST00000638016 BPIFB4P59827 614 aa18.33■□□□□ 0.52
PNKP-230ENST00000638016 MYL5Q02045 173 aa18.33■□□□□ 0.52
PNKP-230ENST00000638016 CAMK2GQ13555 558 aaPredicted RBP18.33■□□□□ 0.52
PNKP-230ENST00000638016 PITRM1Q5JRX3 1037 aa18.33■□□□□ 0.52
PNKP-230ENST00000638016 CCDC183Q5T5S1 534 aa18.33■□□□□ 0.52
PNKP-230ENST00000638016 PEAR1Q5VY43 1037 aaPredicted RBP18.33■□□□□ 0.52
PNKP-230ENST00000638016 NAA35Q5VZE5 725 aa18.33■□□□□ 0.52
PNKP-230ENST00000638016 PHLDB2Q86SQ0 1253 aa18.33■□□□□ 0.52
PNKP-230ENST00000638016 C14orf80Q86SX3 495 aa18.33■□□□□ 0.52
PNKP-230ENST00000638016 XYLT1Q86Y38 959 aa18.33■□□□□ 0.52
PNKP-230ENST00000638016 ATP6V0D2Q8N8Y2 350 aa18.33■□□□□ 0.52
PNKP-230ENST00000638016 TMEM35BQ8NCS4 154 aa18.33■□□□□ 0.52
PNKP-230ENST00000638016 OR52K2Q8NGK3 314 aa18.33■□□□□ 0.52
PNKP-230ENST00000638016 OR2I1PQ8NGU4 316 aa18.33■□□□□ 0.52
PNKP-230ENST00000638016 OR2T3Q8NH03 318 aa18.33■□□□□ 0.52
PNKP-230ENST00000638016 CPA5Q8WXQ8 436 aa18.33■□□□□ 0.52
PNKP-230ENST00000638016 PRCCQ92733 491 aaPredicted RBP18.33■□□□□ 0.52
PNKP-230ENST00000638016 RNF34Q969K3 372 aa18.33■□□□□ 0.52
PNKP-230ENST00000638016 IGSF8Q969P0 613 aa18.33■□□□□ 0.52
PNKP-230ENST00000638016 MRGPRX3Q96LB0 322 aa18.33■□□□□ 0.52
PNKP-230ENST00000638016 GPR174Q9BXC1 333 aa18.33■□□□□ 0.52
PNKP-230ENST00000638016 ITM2CQ9NQX7 267 aa18.33■□□□□ 0.52
PNKP-230ENST00000638016 PIGVQ9NUD9 493 aa18.33■□□□□ 0.52
PNKP-230ENST00000638016 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.33■□□□□ 0.52
PNKP-230ENST00000638016 WSB2Q9NYS7 404 aaPredicted RBP18.33■□□□□ 0.52
PNKP-230ENST00000638016 NOCTQ9UK39 431 aaKnown RBP18.33■□□□□ 0.52
PNKP-230ENST00000638016 PLA2G4CQ9UP65 541 aa18.33■□□□□ 0.52
PNKP-230ENST00000638016 NYNRINQ9P2P1 1898 aaKnown RBP18.33■□□□□ 0.52
PNKP-230ENST00000638016 TYW5A2RUC4 315 aaKnown RBP18.32■□□□□ 0.52
PNKP-230ENST00000638016 F5H5T6 163 aa18.32■□□□□ 0.52
PNKP-230ENST00000638016 H0Y626 953 aa18.32■□□□□ 0.52
PNKP-230ENST00000638016 GOLGA8SH3BPF8 625 aa18.32■□□□□ 0.52
PNKP-230ENST00000638016 NDUFS2O75306 463 aa18.32■□□□□ 0.52
PNKP-230ENST00000638016 ATP1A3P13637 1013 aa18.32■□□□□ 0.52
PNKP-230ENST00000638016 CHRNB2P17787 502 aa18.32■□□□□ 0.52
PNKP-230ENST00000638016 FLT3P36888 993 aa18.32■□□□□ 0.52
PNKP-230ENST00000638016 JAM2P57087 298 aa18.32■□□□□ 0.52
PNKP-230ENST00000638016 NOMO3P69849 1222 aa18.32■□□□□ 0.52
PNKP-230ENST00000638016 SYCP1Q15431 976 aa18.32■□□□□ 0.52
PNKP-230ENST00000638016 FAM102AQ5T9C2 384 aaPredicted RBP18.32■□□□□ 0.52
PNKP-230ENST00000638016 FBXL22Q6P050 247 aa18.32■□□□□ 0.52
PNKP-230ENST00000638016 APTXQ7Z2E3 356 aaKnown RBP18.32■□□□□ 0.52
PNKP-230ENST00000638016 ZNF397Q8NF99 534 aaPredicted RBP18.32■□□□□ 0.52
PNKP-230ENST00000638016 TTC17Q96AE7 1141 aa18.32■□□□□ 0.52
PNKP-230ENST00000638016 NPY6RQ99463 290 aa18.32■□□□□ 0.52
PNKP-230ENST00000638016 EVLQ9UI08 416 aaPredicted RBP18.32■□□□□ 0.52
PNKP-230ENST00000638016 HS3ST4Q9Y661 456 aa18.32■□□□□ 0.52
PNKP-230ENST00000638016 CACNA1EQ15878 2313 aa18.32■□□□□ 0.52
PNKP-230ENST00000638016 GIPC1O14908 333 aa18.31■□□□□ 0.52
PNKP-230ENST00000638016 ADCY5O95622 1261 aa18.31■□□□□ 0.52
PNKP-230ENST00000638016 ATP5BP06576 529 aaKnown RBP18.31■□□□□ 0.52
PNKP-230ENST00000638016 PDGFRAP16234 1089 aa18.31■□□□□ 0.52
PNKP-230ENST00000638016 ZNF18P17022 549 aa18.31■□□□□ 0.52
PNKP-230ENST00000638016 ENGP17813 658 aa18.31■□□□□ 0.52
PNKP-230ENST00000638016 MZF1P28698 734 aaPredicted RBP18.31■□□□□ 0.52
PNKP-230ENST00000638016 CCR1P32246 355 aa18.31■□□□□ 0.52
PNKP-230ENST00000638016 NOS2P35228 1153 aa18.31■□□□□ 0.52
PNKP-230ENST00000638016 MATKP42679 507 aa18.31■□□□□ 0.52
PNKP-230ENST00000638016 GABRB2P47870 512 aa18.31■□□□□ 0.52
PNKP-230ENST00000638016 STK19P49842 368 aaPredicted RBP18.31■□□□□ 0.52
PNKP-230ENST00000638016 SULT1E1P49888 294 aa18.31■□□□□ 0.52
PNKP-230ENST00000638016 TYRO3Q06418 890 aa18.31■□□□□ 0.52
PNKP-230ENST00000638016 UAP1L1Q3KQV9 507 aa18.31■□□□□ 0.52
PNKP-230ENST00000638016 RAB6CQ53S08 254 aa18.31■□□□□ 0.52
PNKP-230ENST00000638016 SPDYCQ5MJ68 293 aa18.31■□□□□ 0.52
PNKP-230ENST00000638016 METTL3Q86U44 580 aaKnown RBP18.31■□□□□ 0.52
PNKP-230ENST00000638016 ERICH1Q86X53 443 aa18.31■□□□□ 0.52
PNKP-230ENST00000638016 DHX40Q8IX18 779 aaKnown RBP18.31■□□□□ 0.52
PNKP-230ENST00000638016 CCAR2Q8N163 923 aaKnown RBP18.31■□□□□ 0.52
PNKP-230ENST00000638016 AOPEPQ8N6M6 819 aa18.31■□□□□ 0.52
PNKP-230ENST00000638016 ZNF419Q96HQ0 510 aaPredicted RBP18.31■□□□□ 0.52
PNKP-230ENST00000638016 RPL10LQ96L21 214 aaKnown RBP18.31■□□□□ 0.52
PNKP-230ENST00000638016 TBCBQ99426 244 aa18.31■□□□□ 0.52
PNKP-230ENST00000638016 IRX2Q9BZI1 471 aaPredicted RBP18.31■□□□□ 0.52
PNKP-230ENST00000638016 RAB6CQ9H0N0 254 aa18.31■□□□□ 0.52
PNKP-230ENST00000638016 TMEM9BQ9NQ34 198 aa18.31■□□□□ 0.52
PNKP-230ENST00000638016 LIMA1Q9UHB6 759 aaKnown RBP18.31■□□□□ 0.52
PNKP-230ENST00000638016 VANGL2Q9ULK5 521 aa18.31■□□□□ 0.52
PNKP-230ENST00000638016 SLCO1B1Q9Y6L6 691 aa18.31■□□□□ 0.52
PNKP-230ENST00000638016 TPRP12270 2363 aaKnown RBP18.31■□□□□ 0.52
PNKP-230ENST00000638016 LGALS16A8MUM7 142 aa18.3■□□□□ 0.52
PNKP-230ENST00000638016 TTC34A8MYJ7 566 aa18.3■□□□□ 0.52
PNKP-230ENST00000638016 SIN3BO75182 1162 aa18.3■□□□□ 0.52
PNKP-230ENST00000638016 PAGE1O75459 146 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms