RNA–Protein interactions for RNA: ENST00000626000.1

SNRPA1-216, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5 BASIC

Gene SNRPA1, Length 539 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-216ENST00000626000 ABCB8Q9NUT2 735 aa14.46□□□□□ -0.09
SNRPA1-216ENST00000626000 CNOT8Q9UFF9 292 aaKnown RBP14.46□□□□□ -0.09
SNRPA1-216ENST00000626000 RAB23Q9ULC3 237 aa14.46□□□□□ -0.09
SNRPA1-216ENST00000626000 HS3ST4Q9Y661 456 aa14.46□□□□□ -0.09
SNRPA1-216ENST00000626000 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.45□□□□□ -0.1
SNRPA1-216ENST00000626000 GOLGA6L7A0A1B0GV03 622 aa14.45□□□□□ -0.1
SNRPA1-216ENST00000626000 TMCO5BA8MYB1 307 aa14.45□□□□□ -0.1
SNRPA1-216ENST00000626000 PRRT4C9JH25 899 aa14.45□□□□□ -0.1
SNRPA1-216ENST00000626000 AKR1B15C9JRZ8 316 aaPredicted RBP14.45□□□□□ -0.1
SNRPA1-216ENST00000626000 AXIN1O15169 862 aa14.45□□□□□ -0.1
SNRPA1-216ENST00000626000 RNF8O76064 485 aa14.45□□□□□ -0.1
SNRPA1-216ENST00000626000 DLDP09622 509 aaKnown RBP14.45□□□□□ -0.1
SNRPA1-216ENST00000626000 HTR7P34969 479 aa14.45□□□□□ -0.1
SNRPA1-216ENST00000626000 ETFBP38117 255 aa14.45□□□□□ -0.1
SNRPA1-216ENST00000626000 NNMTP40261 264 aa14.45□□□□□ -0.1
SNRPA1-216ENST00000626000 ZNF135P52742 658 aaPredicted RBP14.45□□□□□ -0.1
SNRPA1-216ENST00000626000 ST8SIA6P61647 398 aa14.45□□□□□ -0.1
SNRPA1-216ENST00000626000 SCAPQ12770 1279 aa14.45□□□□□ -0.1
SNRPA1-216ENST00000626000 ZNF177Q13360 481 aaPredicted RBP14.45□□□□□ -0.1
SNRPA1-216ENST00000626000 MAMLD1Q13495 774 aa14.45□□□□□ -0.1
SNRPA1-216ENST00000626000 ENPP2Q13822 863 aa14.45□□□□□ -0.1
SNRPA1-216ENST00000626000 CDO1Q16878 200 aa14.45□□□□□ -0.1
SNRPA1-216ENST00000626000 GEN1Q17RS7 908 aa14.45□□□□□ -0.1
SNRPA1-216ENST00000626000 EFHC2Q5JST6 749 aa14.45□□□□□ -0.1
SNRPA1-216ENST00000626000 FBXL22Q6P050 247 aa14.45□□□□□ -0.1
SNRPA1-216ENST00000626000 ALKBH5Q6P6C2 394 aaKnown RBP14.45□□□□□ -0.1
SNRPA1-216ENST00000626000 ZNF783Q6ZMS7 281 aa14.45□□□□□ -0.1
SNRPA1-216ENST00000626000 SETD3Q86TU7 594 aaPredicted RBP14.45□□□□□ -0.1
SNRPA1-216ENST00000626000 CCAR2Q8N163 923 aaKnown RBP14.45□□□□□ -0.1
SNRPA1-216ENST00000626000 CARNMT1Q8N4J0 409 aa14.45□□□□□ -0.1
SNRPA1-216ENST00000626000 CCDC33Q8N5R6 958 aa14.45□□□□□ -0.1
SNRPA1-216ENST00000626000 JOSD2Q8TAC2 188 aa14.45□□□□□ -0.1
SNRPA1-216ENST00000626000 FAM172AQ8WUF8 416 aa14.45□□□□□ -0.1
SNRPA1-216ENST00000626000 OSBPL2Q9H1P3 480 aa14.45□□□□□ -0.1
SNRPA1-216ENST00000626000 ABHD10Q9NUJ1 306 aa14.45□□□□□ -0.1
SNRPA1-216ENST00000626000 STIM2Q9P246 746 aa14.45□□□□□ -0.1
SNRPA1-216ENST00000626000 THAP10Q9P2Z0 257 aaPredicted RBP14.45□□□□□ -0.1
SNRPA1-216ENST00000626000 PPARGC1AQ9UBK2 798 aaKnown RBP14.45□□□□□ -0.1
SNRPA1-216ENST00000626000 VANGL2Q9ULK5 521 aa14.45□□□□□ -0.1
SNRPA1-216ENST00000626000 IGLV3-10A0A075B6K4 115 aa14.44□□□□□ -0.1
SNRPA1-216ENST00000626000 AKR1B10O60218 316 aa14.44□□□□□ -0.1
SNRPA1-216ENST00000626000 SYNCRIPO60506 623 aaKnown RBP14.44□□□□□ -0.1
SNRPA1-216ENST00000626000 ADCY5O95622 1261 aa14.44□□□□□ -0.1
SNRPA1-216ENST00000626000 SRPRAP08240 638 aaKnown RBP14.44□□□□□ -0.1
SNRPA1-216ENST00000626000 ADRA1BP35368 520 aa14.44□□□□□ -0.1
SNRPA1-216ENST00000626000 PLK1P53350 603 aa14.44□□□□□ -0.1
SNRPA1-216ENST00000626000 MESP2Q0VG99 397 aa14.44□□□□□ -0.1
SNRPA1-216ENST00000626000 SLC18A3Q16572 532 aa14.44□□□□□ -0.1
SNRPA1-216ENST00000626000 C6orf118Q5T5N4 469 aa14.44□□□□□ -0.1
SNRPA1-216ENST00000626000 RNF219Q5W0B1 726 aaPredicted RBP14.44□□□□□ -0.1
SNRPA1-216ENST00000626000 EGFLAMQ63HQ2 1017 aa14.44□□□□□ -0.1
SNRPA1-216ENST00000626000 MBLAC2Q68D91 279 aa14.44□□□□□ -0.1
SNRPA1-216ENST00000626000 TRNP1Q6NT89 227 aa14.44□□□□□ -0.1
SNRPA1-216ENST00000626000 PKN3Q6P5Z2 889 aa14.44□□□□□ -0.1
SNRPA1-216ENST00000626000 SERPINA13PQ6UXR4 307 aa14.44□□□□□ -0.1
SNRPA1-216ENST00000626000 TMC6Q7Z403 805 aa14.44□□□□□ -0.1
SNRPA1-216ENST00000626000 RASSF3Q86WH2 238 aa14.44□□□□□ -0.1
SNRPA1-216ENST00000626000 FAM131BQ86XD5 332 aa14.44□□□□□ -0.1
SNRPA1-216ENST00000626000 PSTKQ8IV42 348 aaKnown RBP14.44□□□□□ -0.1
SNRPA1-216ENST00000626000 OLIG1Q8TAK6 271 aa14.44□□□□□ -0.1
SNRPA1-216ENST00000626000 TTC17Q96AE7 1141 aa14.44□□□□□ -0.1
SNRPA1-216ENST00000626000 SPACA7Q96KW9 195 aa14.44□□□□□ -0.1
SNRPA1-216ENST00000626000 CCDC42Q96M95 316 aa14.44□□□□□ -0.1
SNRPA1-216ENST00000626000 ZYG11BQ9C0D3 744 aa14.44□□□□□ -0.1
SNRPA1-216ENST00000626000 SIK2Q9H0K1 926 aa14.44□□□□□ -0.1
SNRPA1-216ENST00000626000 EPC1Q9H2F5 836 aa14.44□□□□□ -0.1
SNRPA1-216ENST00000626000 LUC7LQ9NQ29 371 aaKnown RBP14.44□□□□□ -0.1
SNRPA1-216ENST00000626000 TAS2R14Q9NYV8 317 aa14.44□□□□□ -0.1
SNRPA1-216ENST00000626000 ARHGAP20Q9P2F6 1191 aa14.44□□□□□ -0.1
SNRPA1-216ENST00000626000 RAPGEFL1Q9UHV5 662 aa14.44□□□□□ -0.1
SNRPA1-216ENST00000626000 XPO7Q9UIA9 1087 aaKnown RBP14.44□□□□□ -0.1
SNRPA1-216ENST00000626000 WDFY4Q6ZS81 3184 aa14.44□□□□□ -0.1
SNRPA1-216ENST00000626000 CXorf51AA0A1B0GTR3 108 aa14.43□□□□□ -0.1
SNRPA1-216ENST00000626000 TMEM191CA6NGB0 347 aa14.43□□□□□ -0.1
SNRPA1-216ENST00000626000 DRGXA6NNA5 263 aa14.43□□□□□ -0.1
SNRPA1-216ENST00000626000 GOLGA6L6A8MZA4 724 aa14.43□□□□□ -0.1
SNRPA1-216ENST00000626000 SGK1O00141 431 aa14.43□□□□□ -0.1
SNRPA1-216ENST00000626000 TRIM24O15164 1050 aa14.43□□□□□ -0.1
SNRPA1-216ENST00000626000 ZNF217O75362 1048 aa14.43□□□□□ -0.1
SNRPA1-216ENST00000626000 LMNAP02545 664 aaKnown RBP14.43□□□□□ -0.1
SNRPA1-216ENST00000626000 CHRM1P11229 460 aaPredicted RBP14.43□□□□□ -0.1
SNRPA1-216ENST00000626000 TFE3P19532 575 aaPredicted RBP14.43□□□□□ -0.1
SNRPA1-216ENST00000626000 PSMA2P25787 234 aa14.43□□□□□ -0.1
SNRPA1-216ENST00000626000 VASPP50552 380 aaPredicted RBP14.43□□□□□ -0.1
SNRPA1-216ENST00000626000 HDAC4P56524 1084 aa14.43□□□□□ -0.1
SNRPA1-216ENST00000626000 PIGHQ14442 188 aaPredicted RBP14.43□□□□□ -0.1
SNRPA1-216ENST00000626000 USP39Q53GS9 565 aaKnown RBP14.43□□□□□ -0.1
SNRPA1-216ENST00000626000 TSSK4Q6SA08 328 aa14.43□□□□□ -0.1
SNRPA1-216ENST00000626000 SLFN11Q7Z7L1 901 aa14.43□□□□□ -0.1
SNRPA1-216ENST00000626000 CFAP52Q8N1V2 620 aa14.43□□□□□ -0.1
SNRPA1-216ENST00000626000 GAB3Q8WWW8 586 aa14.43□□□□□ -0.1
SNRPA1-216ENST00000626000 CTNNBL1Q8WYA6 563 aaPredicted RBP14.43□□□□□ -0.1
SNRPA1-216ENST00000626000 HHIPQ96QV1 700 aa14.43□□□□□ -0.1
SNRPA1-216ENST00000626000 RBSNQ9H1K0 784 aa14.43□□□□□ -0.1
SNRPA1-216ENST00000626000 CALCOCO1Q9P1Z2 691 aa14.43□□□□□ -0.1
SNRPA1-216ENST00000626000 BCCIPQ9P287 314 aaKnown RBP eCLIP14.43□□□□□ -0.1
SNRPA1-216ENST00000626000 SUN2Q9UH99 717 aa14.43□□□□□ -0.1
SNRPA1-216ENST00000626000 TBC1D30Q9Y2I9 924 aa14.43□□□□□ -0.1
SNRPA1-216ENST00000626000 STON1Q9Y6Q2 735 aa14.43□□□□□ -0.1
SNRPA1-216ENST00000626000 MYO18AQ92614 2054 aaKnown RBP14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms