RNA–Protein interactions for RNA: ENST00000623342.1

SND1-IT1-201, SND1 intronic transcript 1, humanhuman

BASIC

Gene SND1-IT1, Length 2,481 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1-201ENST00000623342 ZMIZ2Q8NF64 920 aa8.54□□□□□ -1.04
SND1-IT1-201ENST00000623342 APBA2Q99767 749 aa8.54□□□□□ -1.04
SND1-IT1-201ENST00000623342 XPNPEP3Q9NQH7 507 aa8.54□□□□□ -1.04
SND1-IT1-201ENST00000623342 ANLNQ9NQW6 1124 aa8.54□□□□□ -1.04
SND1-IT1-201ENST00000623342 RRN3Q9NYV6 651 aa8.54□□□□□ -1.04
SND1-IT1-201ENST00000623342 KLHL8Q9P2G9 620 aaPredicted RBP8.54□□□□□ -1.04
SND1-IT1-201ENST00000623342 RPL26L1Q9UNX3 145 aaKnown RBP8.54□□□□□ -1.04
SND1-IT1-201ENST00000623342 TIMM13Q9Y5L4 95 aaPredicted RBP8.54□□□□□ -1.04
SND1-IT1-201ENST00000623342 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.54□□□□□ -1.04
SND1-IT1-201ENST00000623342 C2orf71A6NGG8 1288 aa8.54□□□□□ -1.04
SND1-IT1-201ENST00000623342 KCNK1O00180 336 aa8.54□□□□□ -1.04
SND1-IT1-201ENST00000623342 GLRA3O75311 464 aa8.54□□□□□ -1.04
SND1-IT1-201ENST00000623342 SNNO75324 88 aaPredicted RBP8.54□□□□□ -1.04
SND1-IT1-201ENST00000623342 F9P00740 461 aa8.54□□□□□ -1.04
SND1-IT1-201ENST00000623342 IGHA2P01877 340 aa8.54□□□□□ -1.04
SND1-IT1-201ENST00000623342 LTFP02788 710 aa8.54□□□□□ -1.04
SND1-IT1-201ENST00000623342 ALDOAP04075 364 aaKnown RBP8.54□□□□□ -1.04
SND1-IT1-201ENST00000623342 C6orf222P0C671 652 aaPredicted RBP8.54□□□□□ -1.04
SND1-IT1-201ENST00000623342 AKR1A1P14550 325 aa8.54□□□□□ -1.04
SND1-IT1-201ENST00000623342 CALB2P22676 271 aa8.54□□□□□ -1.04
SND1-IT1-201ENST00000623342 PTPN3P26045 913 aa8.54□□□□□ -1.04
SND1-IT1-201ENST00000623342 RPL9P32969 192 aaKnown RBP8.54□□□□□ -1.04
SND1-IT1-201ENST00000623342 CACNA2D1P54289 1103 aa8.54□□□□□ -1.04
SND1-IT1-201ENST00000623342 PPIDQ08752 370 aaKnown RBP8.54□□□□□ -1.04
SND1-IT1-201ENST00000623342 STX3Q13277 289 aa8.54□□□□□ -1.04
SND1-IT1-201ENST00000623342 SPANXN3Q5MJ09 141 aa8.54□□□□□ -1.04
SND1-IT1-201ENST00000623342 WASHC2DQ5SRD0 308 aa8.54□□□□□ -1.04
SND1-IT1-201ENST00000623342 CES4AQ5XG92 561 aa8.54□□□□□ -1.04
SND1-IT1-201ENST00000623342 FAM91A1Q658Y4 838 aa8.54□□□□□ -1.04
SND1-IT1-201ENST00000623342 RPAINQ86UA6 219 aa8.54□□□□□ -1.04
SND1-IT1-201ENST00000623342 ARID3BQ8IVW6 561 aaPredicted RBP8.54□□□□□ -1.04
SND1-IT1-201ENST00000623342 TP53INP2Q8IXH6 220 aa8.54□□□□□ -1.04
SND1-IT1-201ENST00000623342 DDX51Q8N8A6 666 aaKnown RBP eCLIP8.54□□□□□ -1.04
SND1-IT1-201ENST00000623342 SOCS4Q8WXH5 440 aa8.54□□□□□ -1.04
SND1-IT1-201ENST00000623342 LPPQ93052 612 aa8.54□□□□□ -1.04
SND1-IT1-201ENST00000623342 ATP2A3Q93084 1043 aa8.54□□□□□ -1.04
SND1-IT1-201ENST00000623342 SMARCD1Q96GM5 515 aa8.54□□□□□ -1.04
SND1-IT1-201ENST00000623342 BTBD10Q9BSF8 475 aa8.54□□□□□ -1.04
SND1-IT1-201ENST00000623342 MTG1Q9BT17 334 aaPredicted RBP8.54□□□□□ -1.04
SND1-IT1-201ENST00000623342 BRD8Q9H0E9 1235 aa8.54□□□□□ -1.04
SND1-IT1-201ENST00000623342 DDIT4Q9NX09 232 aa8.54□□□□□ -1.04
SND1-IT1-201ENST00000623342 MIOSQ9NXC5 875 aa8.54□□□□□ -1.04
SND1-IT1-201ENST00000623342 SLC17A6Q9P2U8 582 aa8.54□□□□□ -1.04
SND1-IT1-201ENST00000623342 C15orf41Q9Y2V0 281 aa8.54□□□□□ -1.04
SND1-IT1-201ENST00000623342 GIT1Q9Y2X7 761 aa8.54□□□□□ -1.04
SND1-IT1-201ENST00000623342 RANBP2P49792 3224 aaKnown RBP8.53□□□□□ -1.04
SND1-IT1-201ENST00000623342 MYADML2A6NDP7 307 aa8.53□□□□□ -1.04
SND1-IT1-201ENST00000623342 ARL5CA6NH57 179 aa8.53□□□□□ -1.04
SND1-IT1-201ENST00000623342 HHLA1C9JL84 531 aa8.53□□□□□ -1.04
SND1-IT1-201ENST00000623342 I6L893 689 aaPredicted RBP8.53□□□□□ -1.04
SND1-IT1-201ENST00000623342 FCHO1O14526 889 aa8.53□□□□□ -1.04
SND1-IT1-201ENST00000623342 TPP1O14773 563 aa8.53□□□□□ -1.04
SND1-IT1-201ENST00000623342 MTSS1O43312 755 aa8.53□□□□□ -1.04
SND1-IT1-201ENST00000623342 DUSP11O75319 330 aaKnown RBP8.53□□□□□ -1.04
SND1-IT1-201ENST00000623342 AP2A1O95782 977 aa8.53□□□□□ -1.04
SND1-IT1-201ENST00000623342 ITGA2BP08514 1039 aa8.53□□□□□ -1.04
SND1-IT1-201ENST00000623342 PCSK1P29120 753 aa8.53□□□□□ -1.04
SND1-IT1-201ENST00000623342 AFF1P51825 1210 aaKnown RBP8.53□□□□□ -1.04
SND1-IT1-201ENST00000623342 ZNF135P52742 658 aaPredicted RBP8.53□□□□□ -1.04
SND1-IT1-201ENST00000623342 INTS6LQ5JSJ4 861 aaKnown RBP8.53□□□□□ -1.04
SND1-IT1-201ENST00000623342 C17orf99Q6UX52 265 aa8.53□□□□□ -1.04
SND1-IT1-201ENST00000623342 RASSF3Q86WH2 238 aa8.53□□□□□ -1.04
SND1-IT1-201ENST00000623342 C3orf58Q8NDZ4 430 aa8.53□□□□□ -1.04
SND1-IT1-201ENST00000623342 GIMAP7Q8NHV1 300 aa8.53□□□□□ -1.04
SND1-IT1-201ENST00000623342 CERS2Q96G23 380 aa8.53□□□□□ -1.04
SND1-IT1-201ENST00000623342 PRR11Q96HE9 360 aaPredicted RBP8.53□□□□□ -1.04
SND1-IT1-201ENST00000623342 MIPEPQ99797 713 aa8.53□□□□□ -1.04
SND1-IT1-201ENST00000623342 COLEC11Q9BWP8 271 aa8.53□□□□□ -1.04
SND1-IT1-201ENST00000623342 CADM1Q9BY67 442 aaKnown RBP8.53□□□□□ -1.04
SND1-IT1-201ENST00000623342 WWP1Q9H0M0 922 aa8.53□□□□□ -1.04
SND1-IT1-201ENST00000623342 LRRC40Q9H9A6 602 aa8.53□□□□□ -1.04
SND1-IT1-201ENST00000623342 TMEM30AQ9NV96 361 aa8.53□□□□□ -1.04
SND1-IT1-201ENST00000623342 THAP1Q9NVV9 213 aa8.53□□□□□ -1.04
SND1-IT1-201ENST00000623342 ZFATQ9P243 1243 aa8.53□□□□□ -1.04
SND1-IT1-201ENST00000623342 TXNDC16Q9P2K2 825 aa8.53□□□□□ -1.04
SND1-IT1-201ENST00000623342 DCDC2Q9UHG0 476 aa8.53□□□□□ -1.04
SND1-IT1-201ENST00000623342 RPS6KL1Q9Y6S9 549 aa8.53□□□□□ -1.04
SND1-IT1-201ENST00000623342 ZNF638Q14966 1978 aaKnown RBP8.53□□□□□ -1.04
SND1-IT1-201ENST00000623342 MANSC4A6NHS7 340 aaPredicted RBP8.53□□□□□ -1.04
SND1-IT1-201ENST00000623342 ERI2A8K979 691 aaKnown RBP8.53□□□□□ -1.04
SND1-IT1-201ENST00000623342 PEX11AO75192 247 aa8.53□□□□□ -1.04
SND1-IT1-201ENST00000623342 TOP3BO95985 862 aaKnown RBP8.53□□□□□ -1.04
SND1-IT1-201ENST00000623342 AMHP03971 560 aa8.53□□□□□ -1.04
SND1-IT1-201ENST00000623342 MYCNP04198 464 aaPredicted RBP8.53□□□□□ -1.04
SND1-IT1-201ENST00000623342 CTSHP09668 335 aa8.53□□□□□ -1.04
SND1-IT1-201ENST00000623342 ESRRAP11474 423 aaPredicted RBP8.53□□□□□ -1.04
SND1-IT1-201ENST00000623342 MX2P20592 715 aa8.53□□□□□ -1.04
SND1-IT1-201ENST00000623342 GARSP41250 739 aaKnown RBP8.53□□□□□ -1.04
SND1-IT1-201ENST00000623342 SCNN1GP51170 649 aa8.53□□□□□ -1.04
SND1-IT1-201ENST00000623342 HUNKP57058 714 aa8.53□□□□□ -1.04
SND1-IT1-201ENST00000623342 PDE1BQ01064 536 aa8.53□□□□□ -1.04
SND1-IT1-201ENST00000623342 PDE1CQ14123 709 aaPredicted RBP8.53□□□□□ -1.04
SND1-IT1-201ENST00000623342 FASTKD1Q53R41 847 aaKnown RBP8.53□□□□□ -1.04
SND1-IT1-201ENST00000623342 GNASQ5JWF2 1037 aa8.53□□□□□ -1.04
SND1-IT1-201ENST00000623342 N4BP2L1Q5TBK1 243 aaPredicted RBP8.53□□□□□ -1.04
SND1-IT1-201ENST00000623342 AGMOQ6ZNB7 445 aa8.53□□□□□ -1.04
SND1-IT1-201ENST00000623342 BHLHA9Q7RTU4 235 aa8.53□□□□□ -1.04
SND1-IT1-201ENST00000623342 ALYREFQ86V81 257 aaKnown RBP8.53□□□□□ -1.04
SND1-IT1-201ENST00000623342 OR52K1Q8NGK4 314 aa8.53□□□□□ -1.04
SND1-IT1-201ENST00000623342 PPP1R14CQ8TAE6 165 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms