RNA–Protein interactions for RNA: ENST00000621990.4

PDPN-212, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 2,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-212ENST00000621990 PDZD4Q76G19 769 aaPredicted RBP9.68□□□□□ -0.86
PDPN-212ENST00000621990 TTC7BQ86TV6 843 aa9.68□□□□□ -0.86
PDPN-212ENST00000621990 FAM35AQ86V20 835 aa9.68□□□□□ -0.86
PDPN-212ENST00000621990 ALYREFQ86V81 257 aaKnown RBP9.68□□□□□ -0.86
PDPN-212ENST00000621990 FAM72BQ86X60 149 aa9.68□□□□□ -0.86
PDPN-212ENST00000621990 CRLF3Q8IUI8 442 aa9.68□□□□□ -0.86
PDPN-212ENST00000621990 MAB21L3Q8N8X9 362 aa9.68□□□□□ -0.86
PDPN-212ENST00000621990 GIMAP7Q8NHV1 300 aa9.68□□□□□ -0.86
PDPN-212ENST00000621990 DPF3Q92784 378 aa9.68□□□□□ -0.86
PDPN-212ENST00000621990 ZNF570Q96NI8 536 aa9.68□□□□□ -0.86
PDPN-212ENST00000621990 ULBP1Q9BZM6 244 aa9.68□□□□□ -0.86
PDPN-212ENST00000621990 CSNK1G1Q9HCP0 422 aa9.68□□□□□ -0.86
PDPN-212ENST00000621990 TMEM30AQ9NV96 361 aa9.68□□□□□ -0.86
PDPN-212ENST00000621990 TAS2R1Q9NYW7 299 aa9.68□□□□□ -0.86
PDPN-212ENST00000621990 DCDC2Q9UHG0 476 aa9.68□□□□□ -0.86
PDPN-212ENST00000621990 PTCH2Q9Y6C5 1203 aa9.68□□□□□ -0.86
PDPN-212ENST00000621990 PATJQ8NI35 1801 aa9.68□□□□□ -0.86
PDPN-212ENST00000621990 ERI2A8K979 691 aaKnown RBP9.68□□□□□ -0.86
PDPN-212ENST00000621990 TPP1O14773 563 aa9.68□□□□□ -0.86
PDPN-212ENST00000621990 MTSS1O43312 755 aa9.68□□□□□ -0.86
PDPN-212ENST00000621990 PLIN3O60664 434 aa9.68□□□□□ -0.86
PDPN-212ENST00000621990 DIAPH2O60879 1101 aa9.68□□□□□ -0.86
PDPN-212ENST00000621990 LMNAP02545 664 aaKnown RBP9.68□□□□□ -0.86
PDPN-212ENST00000621990 AMHP03971 560 aa9.68□□□□□ -0.86
PDPN-212ENST00000621990 POLBP06746 335 aa9.68□□□□□ -0.86
PDPN-212ENST00000621990 ERCC2P18074 760 aa9.68□□□□□ -0.86
PDPN-212ENST00000621990 SESN2P58004 480 aaPredicted RBP9.68□□□□□ -0.86
PDPN-212ENST00000621990 FSCN1Q16658 493 aaKnown RBP9.68□□□□□ -0.86
PDPN-212ENST00000621990 CMPK2Q5EBM0 449 aa9.68□□□□□ -0.86
PDPN-212ENST00000621990 GPRIN1Q7Z2K8 1008 aa9.68□□□□□ -0.86
PDPN-212ENST00000621990 TMEM135Q86UB9 458 aa9.68□□□□□ -0.86
PDPN-212ENST00000621990 ARID3BQ8IVW6 561 aaPredicted RBP9.68□□□□□ -0.86
PDPN-212ENST00000621990 TP53INP2Q8IXH6 220 aa9.68□□□□□ -0.86
PDPN-212ENST00000621990 KLHDC8BQ8IXV7 354 aa9.68□□□□□ -0.86
PDPN-212ENST00000621990 SLC7A14Q8TBB6 771 aa9.68□□□□□ -0.86
PDPN-212ENST00000621990 HDAC11Q96DB2 347 aa9.68□□□□□ -0.86
PDPN-212ENST00000621990 PCED1BQ96HM7 432 aa9.68□□□□□ -0.86
PDPN-212ENST00000621990 RSRC1Q96IZ7 334 aaKnown RBP9.68□□□□□ -0.86
PDPN-212ENST00000621990 NUDCD1Q96RS6 583 aa9.68□□□□□ -0.86
PDPN-212ENST00000621990 SYT15Q9BQS2 421 aa9.68□□□□□ -0.86
PDPN-212ENST00000621990 MED10Q9BTT4 135 aa9.68□□□□□ -0.86
PDPN-212ENST00000621990 AP5M1Q9H0R1 490 aa9.68□□□□□ -0.86
PDPN-212ENST00000621990 STN1Q9H668 368 aaKnown RBP9.68□□□□□ -0.86
PDPN-212ENST00000621990 CASS4Q9NQ75 786 aa9.68□□□□□ -0.86
PDPN-212ENST00000621990 SLC17A6Q9P2U8 582 aa9.68□□□□□ -0.86
PDPN-212ENST00000621990 CPA4Q9UI42 421 aa9.68□□□□□ -0.86
PDPN-212ENST00000621990 PSAT1Q9Y617 370 aa9.68□□□□□ -0.86
PDPN-212ENST00000621990 SCN10AQ9Y5Y9 1956 aa9.67□□□□□ -0.86
PDPN-212ENST00000621990 GYG2O15488 501 aa9.67□□□□□ -0.86
PDPN-212ENST00000621990 TOP3BO95985 862 aaKnown RBP9.67□□□□□ -0.86
PDPN-212ENST00000621990 FGF3P11487 239 aaPredicted RBP9.67□□□□□ -0.86
PDPN-212ENST00000621990 GCKP35557 465 aa9.67□□□□□ -0.86
PDPN-212ENST00000621990 CACNA2D1P54289 1103 aa9.67□□□□□ -0.86
PDPN-212ENST00000621990 MRPS6P82932 125 aaKnown RBP9.67□□□□□ -0.86
PDPN-212ENST00000621990 BEX3Q00994 111 aa9.67□□□□□ -0.86
PDPN-212ENST00000621990 GALNT2Q10471 571 aa9.67□□□□□ -0.86
PDPN-212ENST00000621990 IFRD2Q12894 506 aaPredicted RBP9.67□□□□□ -0.86
PDPN-212ENST00000621990 STX3Q13277 289 aa9.67□□□□□ -0.86
PDPN-212ENST00000621990 CCL14Q16627 93 aa9.67□□□□□ -0.86
PDPN-212ENST00000621990 FASTKD1Q53R41 847 aaKnown RBP9.67□□□□□ -0.86
PDPN-212ENST00000621990 RINLQ6ZS11 566 aa9.67□□□□□ -0.86
PDPN-212ENST00000621990 SCML4Q8N228 414 aa9.67□□□□□ -0.86
PDPN-212ENST00000621990 NPWQ8N729 165 aa9.67□□□□□ -0.86
PDPN-212ENST00000621990 CCNYQ8ND76 341 aa9.67□□□□□ -0.86
PDPN-212ENST00000621990 OR6Y1Q8NGX8 325 aa9.67□□□□□ -0.86
PDPN-212ENST00000621990 N4BP2L2Q92802 583 aaPredicted RBP9.67□□□□□ -0.86
PDPN-212ENST00000621990 ATP2A3Q93084 1043 aa9.67□□□□□ -0.86
PDPN-212ENST00000621990 PGBD4Q96DM1 585 aa9.67□□□□□ -0.86
PDPN-212ENST00000621990 CERS2Q96G23 380 aa9.67□□□□□ -0.86
PDPN-212ENST00000621990 MYCBPQ99417 103 aaPredicted RBP9.67□□□□□ -0.86
PDPN-212ENST00000621990 CPNE1Q99829 537 aa9.67□□□□□ -0.86
PDPN-212ENST00000621990 MCMBPQ9BTE3 642 aa9.67□□□□□ -0.86
PDPN-212ENST00000621990 CEP41Q9BYV8 373 aa9.67□□□□□ -0.86
PDPN-212ENST00000621990 DCLRE1BQ9H816 532 aa9.67□□□□□ -0.86
PDPN-212ENST00000621990 ZNF395Q9H8N7 513 aaPredicted RBP9.67□□□□□ -0.86
PDPN-212ENST00000621990 CHST12Q9NRB3 414 aa9.67□□□□□ -0.86
PDPN-212ENST00000621990 GEMIN8Q9NWZ8 242 aaKnown RBP9.67□□□□□ -0.86
PDPN-212ENST00000621990 ADAM28Q9UKQ2 775 aa9.67□□□□□ -0.86
PDPN-212ENST00000621990 TRHDEQ9UKU6 1024 aa9.67□□□□□ -0.86
PDPN-212ENST00000621990 CDH9Q9ULB4 789 aa9.67□□□□□ -0.86
PDPN-212ENST00000621990 SORCS3Q9UPU3 1222 aa9.67□□□□□ -0.86
PDPN-212ENST00000621990 CLEC11AQ9Y240 323 aa9.67□□□□□ -0.86
PDPN-212ENST00000621990 LRRC42Q9Y546 428 aa9.67□□□□□ -0.86
PDPN-212ENST00000621990 BPTFQ12830 3046 aa9.67□□□□□ -0.86
PDPN-212ENST00000621990 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.67□□□□□ -0.86
PDPN-212ENST00000621990 CCDC195A0A1B0GUA6 201 aa9.67□□□□□ -0.86
PDPN-212ENST00000621990 MYBPHLA2RUH7 354 aa9.67□□□□□ -0.86
PDPN-212ENST00000621990 MEIS3P2A8K0S8 358 aa9.67□□□□□ -0.86
PDPN-212ENST00000621990 ENTPD5O75356 428 aa9.67□□□□□ -0.86
PDPN-212ENST00000621990 AP1G2O75843 785 aa9.67□□□□□ -0.86
PDPN-212ENST00000621990 F9P00740 461 aa9.67□□□□□ -0.86
PDPN-212ENST00000621990 PROCP04070 461 aa9.67□□□□□ -0.86
PDPN-212ENST00000621990 ESRRAP11474 423 aaPredicted RBP9.67□□□□□ -0.86
PDPN-212ENST00000621990 CYP2B6P20813 491 aa9.67□□□□□ -0.86
PDPN-212ENST00000621990 GP5P40197 560 aa9.67□□□□□ -0.86
PDPN-212ENST00000621990 CXCR3P49682 368 aa9.67□□□□□ -0.86
PDPN-212ENST00000621990 AQP5P55064 265 aa9.67□□□□□ -0.86
PDPN-212ENST00000621990 PCLAFQ15004 111 aa9.67□□□□□ -0.86
PDPN-212ENST00000621990 TEDDM1Q5T9Z0 273 aa9.67□□□□□ -0.86
PDPN-212ENST00000621990 N4BP2L1Q5TBK1 243 aaPredicted RBP9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms