RNA–Protein interactions for RNA: ENST00000618902.1

SHMT1-211, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 5 BASIC

Gene SHMT1, Length 378 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-211ENST00000618902 XPO7Q9UIA9 1087 aaKnown RBP5.45□□□□□ -1.54
SHMT1-211ENST00000618902 RASAL2Q9UJF2 1139 aa5.45□□□□□ -1.54
SHMT1-211ENST00000618902 STRIP2Q9ULQ0 834 aa5.45□□□□□ -1.54
SHMT1-211ENST00000618902 CA14Q9ULX7 337 aa5.45□□□□□ -1.54
SHMT1-211ENST00000618902 STARD13Q9Y3M8 1113 aa5.45□□□□□ -1.54
SHMT1-211ENST00000618902 HBS1LQ9Y450 684 aaKnown RBP5.45□□□□□ -1.54
SHMT1-211ENST00000618902 CEP83Q9Y592 693 aa5.45□□□□□ -1.54
SHMT1-211ENST00000618902 SNX10Q9Y5X0 201 aa5.45□□□□□ -1.54
SHMT1-211ENST00000618902 CEP295Q9C0D2 2601 aa5.45□□□□□ -1.54
SHMT1-211ENST00000618902 TICRRQ7Z2Z1 1910 aa5.44□□□□□ -1.54
SHMT1-211ENST00000618902 SDK1Q7Z5N4 2213 aa5.44□□□□□ -1.54
SHMT1-211ENST00000618902 GOLGA6L7A0A1B0GV03 622 aa5.44□□□□□ -1.54
SHMT1-211ENST00000618902 GRID2IPA4D2P6 1211 aa5.44□□□□□ -1.54
SHMT1-211ENST00000618902 C2CD4BA6NLJ0 364 aa5.44□□□□□ -1.54
SHMT1-211ENST00000618902 SRRM3A6NNA2 597 aaPredicted RBP5.44□□□□□ -1.54
SHMT1-211ENST00000618902 TRIM24O15164 1050 aa5.44□□□□□ -1.54
SHMT1-211ENST00000618902 LILRB5O75023 590 aa5.44□□□□□ -1.54
SHMT1-211ENST00000618902 HSF2BPO75031 334 aa5.44□□□□□ -1.54
SHMT1-211ENST00000618902 TRUB2O95900 331 aaKnown RBP5.44□□□□□ -1.54
SHMT1-211ENST00000618902 LMNAP02545 664 aaKnown RBP5.44□□□□□ -1.54
SHMT1-211ENST00000618902 FTLP02792 175 aaPredicted RBP5.44□□□□□ -1.54
SHMT1-211ENST00000618902 CYP17A1P05093 508 aa5.44□□□□□ -1.54
SHMT1-211ENST00000618902 CCDC172P0C7W6 258 aa5.44□□□□□ -1.54
SHMT1-211ENST00000618902 SLC2A3P11169 496 aa5.44□□□□□ -1.54
SHMT1-211ENST00000618902 GZMAP12544 262 aa5.44□□□□□ -1.54
SHMT1-211ENST00000618902 CD72P21854 359 aa5.44□□□□□ -1.54
SHMT1-211ENST00000618902 TNFRSF8P28908 595 aa5.44□□□□□ -1.54
SHMT1-211ENST00000618902 SLC6A4P31645 630 aa5.44□□□□□ -1.54
SHMT1-211ENST00000618902 RFC1P35251 1148 aaPredicted RBP5.44□□□□□ -1.54
SHMT1-211ENST00000618902 SCNN1AP37088 669 aa5.44□□□□□ -1.54
SHMT1-211ENST00000618902 GRIA2P42262 883 aa5.44□□□□□ -1.54
SHMT1-211ENST00000618902 ARHGAP25P42331 645 aa5.44□□□□□ -1.54
SHMT1-211ENST00000618902 IRAK1P51617 712 aa5.44□□□□□ -1.54
SHMT1-211ENST00000618902 SGSHP51688 502 aa5.44□□□□□ -1.54
SHMT1-211ENST00000618902 VCPP55072 806 aaKnown RBP5.44□□□□□ -1.54
SHMT1-211ENST00000618902 GSCP56915 257 aaPredicted RBP5.44□□□□□ -1.54
SHMT1-211ENST00000618902 RNASE9P60153 205 aaKnown RBP5.44□□□□□ -1.54
SHMT1-211ENST00000618902 YWHAZP63104 245 aaKnown RBP5.44□□□□□ -1.54
SHMT1-211ENST00000618902 GAD2Q05329 585 aa5.44□□□□□ -1.54
SHMT1-211ENST00000618902 GFPT1Q06210 699 aaPredicted RBP5.44□□□□□ -1.54
SHMT1-211ENST00000618902 RING1Q06587 406 aa5.44□□□□□ -1.54
SHMT1-211ENST00000618902 FZD5Q13467 585 aa5.44□□□□□ -1.54
SHMT1-211ENST00000618902 CASP8Q14790 479 aa5.44□□□□□ -1.54
SHMT1-211ENST00000618902 EIF4HQ15056 248 aaKnown RBP5.44□□□□□ -1.54
SHMT1-211ENST00000618902 TRIP4Q15650 581 aaPredicted RBP5.44□□□□□ -1.54
SHMT1-211ENST00000618902 C15orf59Q2T9L4 293 aaPredicted RBP5.44□□□□□ -1.54
SHMT1-211ENST00000618902 CCDC14Q49A88 953 aa5.44□□□□□ -1.54
SHMT1-211ENST00000618902 TDRD12Q587J7 1177 aaKnown RBP5.44□□□□□ -1.54
SHMT1-211ENST00000618902 DCAF6Q58WW2 860 aa5.44□□□□□ -1.54
SHMT1-211ENST00000618902 FAM133BQ5BKY9 247 aaKnown RBP5.44□□□□□ -1.54
SHMT1-211ENST00000618902 ZC3H12AQ5D1E8 599 aaKnown RBP5.44□□□□□ -1.54
SHMT1-211ENST00000618902 FAM102AQ5T9C2 384 aaPredicted RBP5.44□□□□□ -1.54
SHMT1-211ENST00000618902 EMC10Q5UCC4 262 aa5.44□□□□□ -1.54
SHMT1-211ENST00000618902 NUGGCQ68CJ6 796 aa5.44□□□□□ -1.54
SHMT1-211ENST00000618902 NADSYN1Q6IA69 706 aa5.44□□□□□ -1.54
SHMT1-211ENST00000618902 PLEKHA7Q6IQ23 1121 aa5.44□□□□□ -1.54
SHMT1-211ENST00000618902 EMBQ6PCB8 327 aa5.44□□□□□ -1.54
SHMT1-211ENST00000618902 RHBDF2Q6PJF5 856 aa5.44□□□□□ -1.54
SHMT1-211ENST00000618902 CCNI2Q6ZMN8 369 aaPredicted RBP5.44□□□□□ -1.54
SHMT1-211ENST00000618902 SYT13Q7L8C5 426 aa5.44□□□□□ -1.54
SHMT1-211ENST00000618902 ARCQ7LC44 396 aa5.44□□□□□ -1.54
SHMT1-211ENST00000618902 C12orf40Q86WS4 652 aa5.44□□□□□ -1.54
SHMT1-211ENST00000618902 TMEM25Q86YD3 366 aa5.44□□□□□ -1.54
SHMT1-211ENST00000618902 SFTPA1Q8IWL2 248 aa5.44□□□□□ -1.54
SHMT1-211ENST00000618902 UNC45BQ8IWX7 931 aa5.44□□□□□ -1.54
SHMT1-211ENST00000618902 FANCMQ8IYD8 2048 aa5.44□□□□□ -1.54
SHMT1-211ENST00000618902 KMT2EQ8IZD2 1858 aa5.44□□□□□ -1.54
SHMT1-211ENST00000618902 SLC35F6Q8N357 371 aa5.44□□□□□ -1.54
SHMT1-211ENST00000618902 CPXM2Q8N436 756 aa5.44□□□□□ -1.54
SHMT1-211ENST00000618902 ARFGAP1Q8N6T3 406 aa5.44□□□□□ -1.54
SHMT1-211ENST00000618902 C3orf20Q8ND61 904 aa5.44□□□□□ -1.54
SHMT1-211ENST00000618902 PRSS33Q8NF86 280 aa5.44□□□□□ -1.54
SHMT1-211ENST00000618902 IPO4Q8TEX9 1081 aaKnown RBP5.44□□□□□ -1.54
SHMT1-211ENST00000618902 RXFP2Q8WXD0 754 aa5.44□□□□□ -1.54
SHMT1-211ENST00000618902 EZH1Q92800 747 aaPredicted RBP5.44□□□□□ -1.54
SHMT1-211ENST00000618902 CD101Q93033 1021 aa5.44□□□□□ -1.54
SHMT1-211ENST00000618902 PLD4Q96BZ4 506 aa5.44□□□□□ -1.54
SHMT1-211ENST00000618902 XPO6Q96QU8 1125 aaKnown RBP5.44□□□□□ -1.54
SHMT1-211ENST00000618902 NPY6RQ99463 290 aa5.44□□□□□ -1.54
SHMT1-211ENST00000618902 P2RY13Q9BPV8 354 aa5.44□□□□□ -1.54
SHMT1-211ENST00000618902 DDX50Q9BQ39 737 aaKnown RBP5.44□□□□□ -1.54
SHMT1-211ENST00000618902 EPC1Q9H2F5 836 aa5.44□□□□□ -1.54
SHMT1-211ENST00000618902 EBF3Q9H4W6 596 aa5.44□□□□□ -1.54
SHMT1-211ENST00000618902 SYNCQ9H7C4 482 aa5.44□□□□□ -1.54
SHMT1-211ENST00000618902 ANKZF1Q9H8Y5 726 aa5.44□□□□□ -1.54
SHMT1-211ENST00000618902 NHEJ1Q9H9Q4 299 aaPredicted RBP5.44□□□□□ -1.54
SHMT1-211ENST00000618902 LMAN1LQ9HAT1 526 aa5.44□□□□□ -1.54
SHMT1-211ENST00000618902 METTL5Q9NRN9 209 aaKnown RBP5.44□□□□□ -1.54
SHMT1-211ENST00000618902 PIGVQ9NUD9 493 aa5.44□□□□□ -1.54
SHMT1-211ENST00000618902 WDR70Q9NW82 654 aa5.44□□□□□ -1.54
SHMT1-211ENST00000618902 SPATA6Q9NWH7 488 aaPredicted RBP5.44□□□□□ -1.54
SHMT1-211ENST00000618902 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.44□□□□□ -1.54
SHMT1-211ENST00000618902 STOML2Q9UJZ1 356 aa5.44□□□□□ -1.54
SHMT1-211ENST00000618902 AGO1Q9UL18 857 aaKnown RBP5.44□□□□□ -1.54
SHMT1-211ENST00000618902 CLEC4EQ9ULY5 219 aa5.44□□□□□ -1.54
SHMT1-211ENST00000618902 TFR2Q9UP52 801 aa5.44□□□□□ -1.54
SHMT1-211ENST00000618902 REXO2Q9Y3B8 237 aaKnown RBP5.44□□□□□ -1.54
SHMT1-211ENST00000618902 SH3BP1Q9Y3L3 701 aa5.44□□□□□ -1.54
SHMT1-211ENST00000618902 MTF2Q9Y483 593 aaPredicted RBP5.44□□□□□ -1.54
SHMT1-211ENST00000618902 TPRP12270 2363 aaKnown RBP5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms