RNA–Protein interactions for RNA: ENST00000615606.4

CLTCL1-208, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,994 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-208ENST00000615606 PTAR1Q7Z6K3 402 aaPredicted RBP9.66□□□□□ -0.86
CLTCL1-208ENST00000615606 ZNF296Q8WUU4 475 aaPredicted RBP9.66□□□□□ -0.86
CLTCL1-208ENST00000615606 PIK3R5Q8WYR1 880 aa9.66□□□□□ -0.86
CLTCL1-208ENST00000615606 RNF157Q96PX1 679 aa9.66□□□□□ -0.86
CLTCL1-208ENST00000615606 BBS2Q9BXC9 721 aa9.66□□□□□ -0.86
CLTCL1-208ENST00000615606 CDC42EP4Q9H3Q1 356 aaKnown RBP9.66□□□□□ -0.86
CLTCL1-208ENST00000615606 COG4Q9H9E3 785 aa9.66□□□□□ -0.86
CLTCL1-208ENST00000615606 CYLDQ9NQC7 956 aa9.66□□□□□ -0.86
CLTCL1-208ENST00000615606 CDYLQ9Y232 598 aa9.66□□□□□ -0.86
CLTCL1-208ENST00000615606 ACOT9Q9Y305 439 aa9.66□□□□□ -0.86
CLTCL1-208ENST00000615606 RPSAP08865 295 aaKnown RBP9.66□□□□□ -0.86
CLTCL1-208ENST00000615606 WARSP23381 471 aaKnown RBP9.66□□□□□ -0.86
CLTCL1-208ENST00000615606 AARSP49588 968 aaKnown RBP eCLIP9.66□□□□□ -0.863e-6■■■■■ 61.8
CLTCL1-208ENST00000615606 SH3BGRP55822 239 aaPredicted RBP9.66□□□□□ -0.86
CLTCL1-208ENST00000615606 SLC25A52Q3SY17 297 aa9.66□□□□□ -0.86
CLTCL1-208ENST00000615606 NRDE2Q9H7Z3 1164 aa9.66□□□□□ -0.86
CLTCL1-208ENST00000615606 ARL2BPQ9Y2Y0 163 aa9.66□□□□□ -0.86
CLTCL1-208ENST00000615606 RAD54BQ9Y620 910 aa9.66□□□□□ -0.86
CLTCL1-208ENST00000615606 A0A0A0MRY4 1105 aa9.65□□□□□ -0.86
CLTCL1-208ENST00000615606 CDK16Q00536 496 aa9.65□□□□□ -0.86
CLTCL1-208ENST00000615606 GUCY1A3Q02108 690 aa9.65□□□□□ -0.86
CLTCL1-208ENST00000615606 ITGA9Q13797 1035 aa9.65□□□□□ -0.86
CLTCL1-208ENST00000615606 FAM187BQ17R55 369 aa9.65□□□□□ -0.86
CLTCL1-208ENST00000615606 SLC35G1Q2M3R5 365 aa9.65□□□□□ -0.86
CLTCL1-208ENST00000615606 ZCWPW2Q504Y3 356 aa9.65□□□□□ -0.86
CLTCL1-208ENST00000615606 VARS2Q5ST30 1063 aaKnown RBP9.65□□□□□ -0.86
CLTCL1-208ENST00000615606 PKN3Q6P5Z2 889 aa9.65□□□□□ -0.86
CLTCL1-208ENST00000615606 SUGP1Q8IWZ8 645 aaKnown RBP9.65□□□□□ -0.86
CLTCL1-208ENST00000615606 SH2D3CQ8N5H7 860 aa9.65□□□□□ -0.86
CLTCL1-208ENST00000615606 TDRD5Q8NAT2 981 aaKnown RBP9.65□□□□□ -0.86
CLTCL1-208ENST00000615606 SGF29Q96ES7 293 aa9.65□□□□□ -0.86
CLTCL1-208ENST00000615606 SPATA13Q96N96 652 aa9.65□□□□□ -0.86
CLTCL1-208ENST00000615606 PAFAH2Q99487 392 aa9.65□□□□□ -0.86
CLTCL1-208ENST00000615606 OSGEPL1Q9H4B0 414 aa9.65□□□□□ -0.86
CLTCL1-208ENST00000615606 ZDHHC6Q9H6R6 413 aa9.65□□□□□ -0.86
CLTCL1-208ENST00000615606 DMAC2Q9NW81 257 aa9.65□□□□□ -0.86
CLTCL1-208ENST00000615606 OR4Q2P0C623 313 aa9.65□□□□□ -0.86
CLTCL1-208ENST00000615606 HOXB8P17481 243 aaPredicted RBP9.65□□□□□ -0.86
CLTCL1-208ENST00000615606 WASHC5Q12768 1159 aa9.65□□□□□ -0.86
CLTCL1-208ENST00000615606 EIF2B5Q13144 721 aaKnown RBP9.65□□□□□ -0.86
CLTCL1-208ENST00000615606 TERF2Q15554 542 aa9.65□□□□□ -0.86
CLTCL1-208ENST00000615606 PDPK2PQ6A1A2 396 aa9.65□□□□□ -0.86
CLTCL1-208ENST00000615606 SERPINA13PQ6UXR4 307 aa9.65□□□□□ -0.86
CLTCL1-208ENST00000615606 ARMC2Q8NEN0 867 aa9.65□□□□□ -0.86
CLTCL1-208ENST00000615606 KAT2BQ92831 832 aa9.65□□□□□ -0.86
CLTCL1-208ENST00000615606 PRPF18Q99633 342 aaKnown RBP9.65□□□□□ -0.86
CLTCL1-208ENST00000615606 GPAMQ9HCL2 828 aa9.65□□□□□ -0.86
CLTCL1-208ENST00000615606 RUVBL2Q9Y230 463 aaKnown RBP9.65□□□□□ -0.86
CLTCL1-208ENST00000615606 STXBP5LQ9Y2K9 1186 aa9.65□□□□□ -0.86
CLTCL1-208ENST00000615606 ADGRA2Q96PE1 1338 aa9.65□□□□□ -0.86
CLTCL1-208ENST00000615606 A0A1W2PQ45 241 aaPredicted RBP9.65□□□□□ -0.86
CLTCL1-208ENST00000615606 A0A1W2PQY0 241 aa9.65□□□□□ -0.86
CLTCL1-208ENST00000615606 PFKMP08237 780 aa9.65□□□□□ -0.86
CLTCL1-208ENST00000615606 SPATA31D3P0C874 917 aa9.65□□□□□ -0.86
CLTCL1-208ENST00000615606 ACRP10323 421 aa9.65□□□□□ -0.86
CLTCL1-208ENST00000615606 SERPINB4P48594 390 aa9.65□□□□□ -0.86
CLTCL1-208ENST00000615606 PPP1R15BQ5SWA1 713 aa9.65□□□□□ -0.86
CLTCL1-208ENST00000615606 SPATA31D4Q6ZUB0 917 aa9.65□□□□□ -0.86
CLTCL1-208ENST00000615606 FAM228AQ86W67 206 aa9.65□□□□□ -0.86
CLTCL1-208ENST00000615606 IRF2BP1Q8IU81 584 aa9.65□□□□□ -0.86
CLTCL1-208ENST00000615606 GPR152Q8TDT2 470 aa9.65□□□□□ -0.86
CLTCL1-208ENST00000615606 FAM84AQ96KN4 292 aa9.65□□□□□ -0.86
CLTCL1-208ENST00000615606 HNRNPABQ99729 332 aaKnown RBP9.65□□□□□ -0.86
CLTCL1-208ENST00000615606 OMDQ99983 421 aa9.65□□□□□ -0.86
CLTCL1-208ENST00000615606 GABRQQ9UN88 632 aa9.65□□□□□ -0.86
CLTCL1-208ENST00000615606 DYRK1BQ9Y463 629 aa9.65□□□□□ -0.86
CLTCL1-208ENST00000615606 TRPC5OSA6NMA1 111 aa9.65□□□□□ -0.87
CLTCL1-208ENST00000615606 LMNAP02545 664 aaKnown RBP9.65□□□□□ -0.87
CLTCL1-208ENST00000615606 TPH1P17752 444 aa9.65□□□□□ -0.87
CLTCL1-208ENST00000615606 MMP8P22894 467 aa9.65□□□□□ -0.87
CLTCL1-208ENST00000615606 SERPINH1P50454 418 aaKnown RBP9.65□□□□□ -0.87
CLTCL1-208ENST00000615606 SPIRE1Q08AE8 756 aa9.65□□□□□ -0.87
CLTCL1-208ENST00000615606 MAB21L3Q8N8X9 362 aa9.65□□□□□ -0.87
CLTCL1-208ENST00000615606 CXorf38Q8TB03 319 aa9.65□□□□□ -0.87
CLTCL1-208ENST00000615606 LZICQ8WZA0 190 aa9.65□□□□□ -0.87
CLTCL1-208ENST00000615606 ARL8AQ96BM9 186 aa9.65□□□□□ -0.87
CLTCL1-208ENST00000615606 LRRC39Q96DD0 335 aa9.65□□□□□ -0.87
CLTCL1-208ENST00000615606 FAR2Q96K12 515 aa9.65□□□□□ -0.87
CLTCL1-208ENST00000615606 BTN2A3PQ96KV6 586 aa9.65□□□□□ -0.87
CLTCL1-208ENST00000615606 ATP13A3Q9H7F0 1226 aa9.65□□□□□ -0.87
CLTCL1-208ENST00000615606 MANSC1Q9H8J5 431 aa9.65□□□□□ -0.87
CLTCL1-208ENST00000615606 WRAP73Q9P2S5 460 aaPredicted RBP9.65□□□□□ -0.87
CLTCL1-208ENST00000615606 PCDHGC3Q9UN70 934 aa9.65□□□□□ -0.87
CLTCL1-208ENST00000615606 A0A1W2PQH9 124 aa9.64□□□□□ -0.87
CLTCL1-208ENST00000615606 DNM1LO00429 736 aa9.64□□□□□ -0.87
CLTCL1-208ENST00000615606 MEFVO15553 781 aaPredicted RBP9.64□□□□□ -0.87
CLTCL1-208ENST00000615606 E2F6O75461 281 aa9.64□□□□□ -0.87
CLTCL1-208ENST00000615606 OR56A5P0C7T3 313 aa9.64□□□□□ -0.87
CLTCL1-208ENST00000615606 CES1P23141 567 aa9.64□□□□□ -0.87
CLTCL1-208ENST00000615606 MGAT1P26572 445 aa9.64□□□□□ -0.87
CLTCL1-208ENST00000615606 GRK3P35626 688 aa9.64□□□□□ -0.87
CLTCL1-208ENST00000615606 ELK3P41970 407 aa9.64□□□□□ -0.87
CLTCL1-208ENST00000615606 SCARA3Q6AZY7 606 aa9.64□□□□□ -0.87
CLTCL1-208ENST00000615606 PSTKQ8IV42 348 aaKnown RBP9.64□□□□□ -0.87
CLTCL1-208ENST00000615606 VPS37AQ8NEZ2 397 aa9.64□□□□□ -0.87
CLTCL1-208ENST00000615606 TMEM159Q96B96 161 aa9.64□□□□□ -0.87
CLTCL1-208ENST00000615606 TCF25Q9BQ70 676 aa9.64□□□□□ -0.87
CLTCL1-208ENST00000615606 UNC93B1Q9H1C4 597 aa9.64□□□□□ -0.87
CLTCL1-208ENST00000615606 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.64□□□□□ -0.87
CLTCL1-208ENST00000615606 L1RE1Q9UN81 338 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms