RNA–Protein interactions for RNA: ENST00000606801.1

RNU6-88P-201, Transcript of RNA, U6 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU6-88P, Length 100 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-88P-201ENST00000606801 WIPF2Q8TF74 440 aaPredicted RBP4.37□□□□□ -1.71
RNU6-88P-201ENST00000606801 MAP4K1Q92918 833 aa4.37□□□□□ -1.71
RNU6-88P-201ENST00000606801 ZSCAN31Q96LW9 406 aaPredicted RBP4.37□□□□□ -1.71
RNU6-88P-201ENST00000606801 COG8Q96MW5 612 aa4.37□□□□□ -1.71
RNU6-88P-201ENST00000606801 TWNKQ96RR1 684 aa4.37□□□□□ -1.71
RNU6-88P-201ENST00000606801 ZNF347Q96SE7 839 aa4.37□□□□□ -1.71
RNU6-88P-201ENST00000606801 SENP7Q9BQF6 1050 aa4.37□□□□□ -1.71
RNU6-88P-201ENST00000606801 PYM1Q9BRP8 204 aaKnown RBP4.37□□□□□ -1.71
RNU6-88P-201ENST00000606801 PRDM16Q9HAZ2 1276 aa4.37□□□□□ -1.71
RNU6-88P-201ENST00000606801 PDE11AQ9HCR9 933 aa4.37□□□□□ -1.71
RNU6-88P-201ENST00000606801 RIC8AQ9NPQ8 531 aa4.37□□□□□ -1.71
RNU6-88P-201ENST00000606801 TLR8Q9NR97 1041 aaKnown RBP4.37□□□□□ -1.71
RNU6-88P-201ENST00000606801 C9orf78Q9NZ63 289 aaPredicted RBP4.37□□□□□ -1.71
RNU6-88P-201ENST00000606801 DNAJC16Q9Y2G8 782 aa4.37□□□□□ -1.71
RNU6-88P-201ENST00000606801 DERAQ9Y315 318 aa4.37□□□□□ -1.71
RNU6-88P-201ENST00000606801 NPIPB13A6NJU9 1138 aa4.36□□□□□ -1.71
RNU6-88P-201ENST00000606801 NPIPB5A8MRT5 1133 aa4.36□□□□□ -1.71
RNU6-88P-201ENST00000606801 NPIPB4C9JG80 1138 aa4.36□□□□□ -1.71
RNU6-88P-201ENST00000606801 TMEM232C9JQI7 657 aa4.36□□□□□ -1.71
RNU6-88P-201ENST00000606801 EYA2O00167 538 aa4.36□□□□□ -1.71
RNU6-88P-201ENST00000606801 NCAM2O15394 837 aa4.36□□□□□ -1.71
RNU6-88P-201ENST00000606801 ALDOAP04075 364 aaKnown RBP4.36□□□□□ -1.71
RNU6-88P-201ENST00000606801 PRKCGP05129 697 aa4.36□□□□□ -1.71
RNU6-88P-201ENST00000606801 POLBP06746 335 aa4.36□□□□□ -1.71
RNU6-88P-201ENST00000606801 ALDOCP09972 364 aaKnown RBP4.36□□□□□ -1.71
RNU6-88P-201ENST00000606801 FBLP22087 321 aaKnown RBP4.36□□□□□ -1.71
RNU6-88P-201ENST00000606801 PRPH2P23942 346 aa4.36□□□□□ -1.71
RNU6-88P-201ENST00000606801 AVPR2P30518 371 aa4.36□□□□□ -1.71
RNU6-88P-201ENST00000606801 HOXA7P31268 230 aaPredicted RBP4.36□□□□□ -1.71
RNU6-88P-201ENST00000606801 MAPK9P45984 424 aa4.36□□□□□ -1.71
RNU6-88P-201ENST00000606801 SEMA3AQ14563 771 aa4.36□□□□□ -1.71
RNU6-88P-201ENST00000606801 PFKFB3Q16875 520 aaPredicted RBP4.36□□□□□ -1.71
RNU6-88P-201ENST00000606801 MEX3CQ5U5Q3 659 aaKnown RBP4.36□□□□□ -1.71
RNU6-88P-201ENST00000606801 MTFR2Q6P444 385 aa4.36□□□□□ -1.71
RNU6-88P-201ENST00000606801 SYNE3Q6ZMZ3 975 aa4.36□□□□□ -1.71
RNU6-88P-201ENST00000606801 MDGA2Q7Z553 956 aa4.36□□□□□ -1.71
RNU6-88P-201ENST00000606801 SRFBP1Q8NEF9 429 aaKnown RBP4.36□□□□□ -1.71
RNU6-88P-201ENST00000606801 FCRL5Q96RD9 977 aa4.36□□□□□ -1.71
RNU6-88P-201ENST00000606801 PIGSQ96S52 555 aa4.36□□□□□ -1.71
RNU6-88P-201ENST00000606801 SH2D3AQ9BRG2 576 aa4.36□□□□□ -1.71
RNU6-88P-201ENST00000606801 HDHD5Q9BXW7 423 aa4.36□□□□□ -1.71
RNU6-88P-201ENST00000606801 OSBPL5Q9H0X9 879 aaPredicted RBP4.36□□□□□ -1.71
RNU6-88P-201ENST00000606801 SFXN1Q9H9B4 322 aa4.36□□□□□ -1.71
RNU6-88P-201ENST00000606801 IL21RQ9HBE5 538 aa4.36□□□□□ -1.71
RNU6-88P-201ENST00000606801 TXNRD2Q9NNW7 524 aa4.36□□□□□ -1.71
RNU6-88P-201ENST00000606801 PDGFCQ9NRA1 345 aa4.36□□□□□ -1.71
RNU6-88P-201ENST00000606801 RASSF1Q9NS23 344 aa4.36□□□□□ -1.71
RNU6-88P-201ENST00000606801 TMEM160Q9NX00 188 aa4.36□□□□□ -1.71
RNU6-88P-201ENST00000606801 GJD2Q9UKL4 321 aa4.36□□□□□ -1.71
RNU6-88P-201ENST00000606801 LRRFIP2Q9Y608 721 aaKnown RBP4.36□□□□□ -1.71
RNU6-88P-201ENST00000606801 PCSK5Q92824 1860 aa4.36□□□□□ -1.71
RNU6-88P-201ENST00000606801 TP73O15350 636 aa4.35□□□□□ -1.71
RNU6-88P-201ENST00000606801 CNTFP26441 200 aa4.35□□□□□ -1.71
RNU6-88P-201ENST00000606801 MPGP29372 298 aa4.35□□□□□ -1.71
RNU6-88P-201ENST00000606801 ADPRHP54922 357 aa4.35□□□□□ -1.71
RNU6-88P-201ENST00000606801 B4GALNT1Q00973 533 aa4.35□□□□□ -1.71
RNU6-88P-201ENST00000606801 CDK18Q07002 472 aa4.35□□□□□ -1.71
RNU6-88P-201ENST00000606801 CERKLQ49MI3 558 aaPredicted RBP4.35□□□□□ -1.71
RNU6-88P-201ENST00000606801 CC2D1BQ5T0F9 858 aaKnown RBP4.35□□□□□ -1.71
RNU6-88P-201ENST00000606801 TMEM88Q6PEY1 159 aa4.35□□□□□ -1.71
RNU6-88P-201ENST00000606801 RBM44Q6ZP01 1051 aaKnown RBP4.35□□□□□ -1.71
RNU6-88P-201ENST00000606801 BBS12Q6ZW61 710 aa4.35□□□□□ -1.71
RNU6-88P-201ENST00000606801 LRRTM4Q86VH4 590 aa4.35□□□□□ -1.71
RNU6-88P-201ENST00000606801 TMEM57Q8N5G2 664 aa4.35□□□□□ -1.71
RNU6-88P-201ENST00000606801 CEP70Q8NHQ1 597 aa4.35□□□□□ -1.71
RNU6-88P-201ENST00000606801 TRIM63Q969Q1 353 aa4.35□□□□□ -1.71
RNU6-88P-201ENST00000606801 ZNF764Q96H86 408 aaPredicted RBP4.35□□□□□ -1.71
RNU6-88P-201ENST00000606801 HTATIP2Q9BUP3 242 aa4.35□□□□□ -1.71
RNU6-88P-201ENST00000606801 QTRT1Q9BXR0 403 aaKnown RBP4.35□□□□□ -1.71
RNU6-88P-201ENST00000606801 ADARB2Q9NS39 739 aaKnown RBP4.35□□□□□ -1.71
RNU6-88P-201ENST00000606801 TMLHEQ9NVH6 421 aa4.35□□□□□ -1.71
RNU6-88P-201ENST00000606801 ARL8BQ9NVJ2 186 aa4.35□□□□□ -1.71
RNU6-88P-201ENST00000606801 PTGFRNQ9P2B2 879 aa4.35□□□□□ -1.71
RNU6-88P-201ENST00000606801 BAG5Q9UL15 447 aa4.35□□□□□ -1.71
RNU6-88P-201ENST00000606801 SLC22A23A1A5C7 686 aa4.34□□□□□ -1.71
RNU6-88P-201ENST00000606801 C17orf100A8MU93 164 aa4.34□□□□□ -1.71
RNU6-88P-201ENST00000606801 MASP2O00187 686 aa4.34□□□□□ -1.71
RNU6-88P-201ENST00000606801 DSCR3O14972 297 aa4.34□□□□□ -1.71
RNU6-88P-201ENST00000606801 HNRNPRO43390 633 aaKnown RBP4.34□□□□□ -1.71
RNU6-88P-201ENST00000606801 SGPL1O95470 568 aa4.34□□□□□ -1.71
RNU6-88P-201ENST00000606801 PLAUP00749 431 aa4.34□□□□□ -1.71
RNU6-88P-201ENST00000606801 SLC3A2P08195 630 aaKnown RBP4.34□□□□□ -1.71
RNU6-88P-201ENST00000606801 ARSAP15289 507 aa4.34□□□□□ -1.71
RNU6-88P-201ENST00000606801 ST6GAL1P15907 406 aa4.34□□□□□ -1.71
RNU6-88P-201ENST00000606801 PCP4P48539 62 aa4.34□□□□□ -1.71
RNU6-88P-201ENST00000606801 MCM2P49736 904 aa4.34□□□□□ -1.71
RNU6-88P-201ENST00000606801 TUBP50607 506 aa4.34□□□□□ -1.71
RNU6-88P-201ENST00000606801 PAPOLAP51003 745 aaKnown RBP4.34□□□□□ -1.71
RNU6-88P-201ENST00000606801 CFHR1Q03591 330 aa4.34□□□□□ -1.71
RNU6-88P-201ENST00000606801 ZBTB16Q05516 673 aa4.34□□□□□ -1.71
RNU6-88P-201ENST00000606801 EARS2Q5JPH6 523 aaKnown RBP4.34□□□□□ -1.71
RNU6-88P-201ENST00000606801 ANKRD45Q5TZF3 282 aa4.34□□□□□ -1.71
RNU6-88P-201ENST00000606801 RINLQ6ZS11 566 aa4.34□□□□□ -1.71
RNU6-88P-201ENST00000606801 PTF1AQ7RTS3 328 aa4.34□□□□□ -1.71
RNU6-88P-201ENST00000606801 TMTC1Q8IUR5 882 aa4.34□□□□□ -1.71
RNU6-88P-201ENST00000606801 ARL14EPQ8N8R7 260 aaPredicted RBP4.34□□□□□ -1.71
RNU6-88P-201ENST00000606801 FSIP1Q8NA03 581 aa4.34□□□□□ -1.71
RNU6-88P-201ENST00000606801 FAM110DQ8TAY7 271 aaPredicted RBP4.34□□□□□ -1.71
RNU6-88P-201ENST00000606801 DDB2Q92466 427 aa4.34□□□□□ -1.71
RNU6-88P-201ENST00000606801 MAELQ96JY0 434 aaKnown RBP4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms