RNA–Protein interactions for RNA: ENST00000606752.1

USP6NL-204, Transcript of USP6 N-terminal like, humanhuman

TSL 1 (best)

Gene USP6NL, Length 1,823 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-204ENST00000606752 EIF3BP55884 814 aaKnown RBP22.2■■□□□ 1.14
USP6NL-204ENST00000606752 ERVFC1P60507 584 aa22.2■■□□□ 1.14
USP6NL-204ENST00000606752 GALNT2Q10471 571 aa22.2■■□□□ 1.14
USP6NL-204ENST00000606752 SLC29A2Q14542 456 aa22.2■■□□□ 1.14
USP6NL-204ENST00000606752 NUGGCQ68CJ6 796 aa22.2■■□□□ 1.14
USP6NL-204ENST00000606752 SPATA31D4Q6ZUB0 917 aa22.2■■□□□ 1.14
USP6NL-204ENST00000606752 EMILIN2Q9BXX0 1053 aa22.2■■□□□ 1.14
USP6NL-204ENST00000606752 KLC2Q9H0B6 622 aa22.2■■□□□ 1.14
USP6NL-204ENST00000606752 A0A0A0MRY4 1105 aa22.2■■□□□ 1.14
USP6NL-204ENST00000606752 LINC01553A4QN01 128 aa22.2■■□□□ 1.14
USP6NL-204ENST00000606752 CHADO15335 359 aa22.2■■□□□ 1.14
USP6NL-204ENST00000606752 COCHO43405 550 aa22.2■■□□□ 1.14
USP6NL-204ENST00000606752 PPIDQ08752 370 aaKnown RBP22.2■■□□□ 1.14
USP6NL-204ENST00000606752 AUHQ13825 339 aaKnown RBP22.2■■□□□ 1.14
USP6NL-204ENST00000606752 LRRC31Q6UY01 552 aa22.2■■□□□ 1.14
USP6NL-204ENST00000606752 ZNF683Q8IZ20 524 aa22.2■■□□□ 1.14
USP6NL-204ENST00000606752 OR2W6PQ8NHA6 318 aa22.2■■□□□ 1.14
USP6NL-204ENST00000606752 HDAC11Q96DB2 347 aa22.2■■□□□ 1.14
USP6NL-204ENST00000606752 SPATA13Q96N96 652 aa22.2■■□□□ 1.14
USP6NL-204ENST00000606752 ASB3Q9Y575 518 aa22.2■■□□□ 1.14
USP6NL-204ENST00000606752 TCRBV7S3A2A0A539 114 aa22.19■■□□□ 1.14
USP6NL-204ENST00000606752 WASH4PA8MWX3 477 aa22.19■■□□□ 1.14
USP6NL-204ENST00000606752 TTC4O95801 387 aa22.19■■□□□ 1.14
USP6NL-204ENST00000606752 GARSP41250 739 aaKnown RBP22.19■■□□□ 1.14
USP6NL-204ENST00000606752 KCNJ11Q14654 390 aa22.19■■□□□ 1.14
USP6NL-204ENST00000606752 ANKRD20A2Q5SQ80 823 aa22.19■■□□□ 1.14
USP6NL-204ENST00000606752 CEP85LQ5SZL2 805 aa22.19■■□□□ 1.14
USP6NL-204ENST00000606752 ANKRD20A1Q5TYW2 823 aa22.19■■□□□ 1.14
USP6NL-204ENST00000606752 ANKRD20A3Q5VUR7 823 aa22.19■■□□□ 1.14
USP6NL-204ENST00000606752 MRPL43Q8N983 215 aaKnown RBP22.19■■□□□ 1.14
USP6NL-204ENST00000606752 SPPL3Q8TCT6 385 aa22.19■■□□□ 1.14
USP6NL-204ENST00000606752 DPF3Q92784 378 aa22.19■■□□□ 1.14
USP6NL-204ENST00000606752 PHACTR1Q9C0D0 580 aa22.19■■□□□ 1.14
USP6NL-204ENST00000606752 ETNK1Q9HBU6 452 aa22.19■■□□□ 1.14
USP6NL-204ENST00000606752 ENTPD7Q9NQZ7 604 aa22.19■■□□□ 1.14
USP6NL-204ENST00000606752 PPARGC1AQ9UBK2 798 aaKnown RBP22.19■■□□□ 1.14
USP6NL-204ENST00000606752 NR2E3Q9Y5X4 410 aa22.19■■□□□ 1.14
USP6NL-204ENST00000606752 OPHN1O60890 802 aa22.18■■□□□ 1.14
USP6NL-204ENST00000606752 MAGEA4P43358 317 aa22.18■■□□□ 1.14
USP6NL-204ENST00000606752 MAGEA6P43360 314 aa22.18■■□□□ 1.14
USP6NL-204ENST00000606752 COG7P83436 770 aa22.18■■□□□ 1.14
USP6NL-204ENST00000606752 ZNF844Q08AG5 666 aa22.18■■□□□ 1.14
USP6NL-204ENST00000606752 HIF1AQ16665 826 aa22.18■■□□□ 1.14
USP6NL-204ENST00000606752 FAM182AQ5T1J6 154 aa22.18■■□□□ 1.14
USP6NL-204ENST00000606752 ARHGEF18Q6ZSZ5 1173 aa22.18■■□□□ 1.14
USP6NL-204ENST00000606752 CCDC149Q6ZUS6 474 aa22.18■■□□□ 1.14
USP6NL-204ENST00000606752 CENPUQ71F23 418 aa22.18■■□□□ 1.14
USP6NL-204ENST00000606752 RTL3Q8N8U3 475 aaKnown RBP22.18■■□□□ 1.14
USP6NL-204ENST00000606752 VANGL2Q9ULK5 521 aa22.18■■□□□ 1.14
USP6NL-204ENST00000606752 IGLV3-10A0A075B6K4 115 aa22.17■■□□□ 1.14
USP6NL-204ENST00000606752 GOLGA8MH3BSY2 632 aa22.17■■□□□ 1.14
USP6NL-204ENST00000606752 RNF103O00237 685 aa22.17■■□□□ 1.14
USP6NL-204ENST00000606752 MTSS1O43312 755 aa22.17■■□□□ 1.14
USP6NL-204ENST00000606752 TMEM63AO94886 807 aa22.17■■□□□ 1.14
USP6NL-204ENST00000606752 KCNQ1P51787 676 aa22.17■■□□□ 1.14
USP6NL-204ENST00000606752 ARL4CP56559 192 aa22.17■■□□□ 1.14
USP6NL-204ENST00000606752 CBX1P83916 185 aa22.17■■□□□ 1.14
USP6NL-204ENST00000606752 UBE3AQ05086 875 aa22.17■■□□□ 1.14
USP6NL-204ENST00000606752 ZNF33AQ06730 810 aa22.17■■□□□ 1.14
USP6NL-204ENST00000606752 WASHC5Q12768 1159 aa22.17■■□□□ 1.14
USP6NL-204ENST00000606752 KYNUQ16719 465 aa22.17■■□□□ 1.14
USP6NL-204ENST00000606752 PABPC1LQ4VXU2 614 aaKnown RBP22.17■■□□□ 1.14
USP6NL-204ENST00000606752 POF1BQ8WVV4 589 aa22.17■■□□□ 1.14
USP6NL-204ENST00000606752 CELF6Q96J87 481 aaKnown RBP22.17■■□□□ 1.14
USP6NL-204ENST00000606752 SAYSD1Q9NPB0 183 aa22.17■■□□□ 1.14
USP6NL-204ENST00000606752 DONSONQ9NYP3 566 aa22.17■■□□□ 1.14
USP6NL-204ENST00000606752 MPP6Q9NZW5 540 aa22.17■■□□□ 1.14
USP6NL-204ENST00000606752 GOLGA8KD6RF30 607 aa22.17■■□□□ 1.14
USP6NL-204ENST00000606752 C5orf67F2Z3F1 127 aa22.17■■□□□ 1.14
USP6NL-204ENST00000606752 ALOX15BO15296 676 aa22.17■■□□□ 1.14
USP6NL-204ENST00000606752 METTL18O95568 372 aa22.17■■□□□ 1.14
USP6NL-204ENST00000606752 RHOQP17081 205 aa22.17■■□□□ 1.14
USP6NL-204ENST00000606752 IFFO1Q0D2I5 559 aa22.17■■□□□ 1.14
USP6NL-204ENST00000606752 RAP1GAP2Q684P5 730 aa22.17■■□□□ 1.14
USP6NL-204ENST00000606752 PRMT1Q99873 361 aaKnown RBP22.17■■□□□ 1.14
USP6NL-204ENST00000606752 C17orf80Q9BSJ5 609 aa22.17■■□□□ 1.14
USP6NL-204ENST00000606752 ZYG11BQ9C0D3 744 aa22.17■■□□□ 1.14
USP6NL-204ENST00000606752 NINJ2Q9NZG7 142 aa22.17■■□□□ 1.14
USP6NL-204ENST00000606752 SEPT10Q9P0V9 454 aa22.17■■□□□ 1.14
USP6NL-204ENST00000606752 C2orf71A6NGG8 1288 aa22.16■■□□□ 1.14
USP6NL-204ENST00000606752 EIF3HO15372 352 aaKnown RBP eCLIP22.16■■□□□ 1.14
USP6NL-204ENST00000606752 RNF40O75150 1001 aa22.16■■□□□ 1.14
USP6NL-204ENST00000606752 OAS1P00973 400 aaKnown RBP22.16■■□□□ 1.14
USP6NL-204ENST00000606752 F11P03951 625 aa22.16■■□□□ 1.14
USP6NL-204ENST00000606752 FDFT1P37268 417 aa22.16■■□□□ 1.14
USP6NL-204ENST00000606752 HARS2P49590 506 aaKnown RBP22.16■■□□□ 1.14
USP6NL-204ENST00000606752 GAD2Q05329 585 aa22.16■■□□□ 1.14
USP6NL-204ENST00000606752 UBAP2Q5T6F2 1119 aaKnown RBP22.16■■□□□ 1.14
USP6NL-204ENST00000606752 FBXL22Q6P050 247 aa22.16■■□□□ 1.14
USP6NL-204ENST00000606752 PPP1R21Q6ZMI0 780 aa22.16■■□□□ 1.14
USP6NL-204ENST00000606752 TMEM150AQ86TG1 271 aa22.16■■□□□ 1.14
USP6NL-204ENST00000606752 NLRP14Q86W24 1093 aa22.16■■□□□ 1.14
USP6NL-204ENST00000606752 ARHGAP12Q8IWW6 846 aa22.16■■□□□ 1.14
USP6NL-204ENST00000606752 KREMEN2Q8NCW0 462 aa22.16■■□□□ 1.14
USP6NL-204ENST00000606752 EXOC4Q96A65 974 aa22.16■■□□□ 1.14
USP6NL-204ENST00000606752 PKNOX2Q96KN3 472 aa22.16■■□□□ 1.14
USP6NL-204ENST00000606752 FRMD8Q9BZ67 464 aaPredicted RBP22.16■■□□□ 1.14
USP6NL-204ENST00000606752 ZNF334Q9HCZ1 680 aaPredicted RBP22.16■■□□□ 1.14
USP6NL-204ENST00000606752 TLR9Q9NR96 1032 aa22.16■■□□□ 1.14
USP6NL-204ENST00000606752 GOLGA6L10A6NI86 522 aa22.15■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms