RNA–Protein interactions for RNA: ENST00000605814.1

HMGB1P50-201, Transcript of high mobility group box 1 pseudogene 50, humanhuman

BASIC

Gene HMGB1P50, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P50-201ENST00000605814 SLC30A1Q9Y6M5 507 aa4.22□□□□□ -1.73
HMGB1P50-201ENST00000605814 ZMYM2Q9UBW7 1377 aa4.22□□□□□ -1.73
HMGB1P50-201ENST00000605814 CAMTA1Q9Y6Y1 1673 aa4.22□□□□□ -1.73
HMGB1P50-201ENST00000605814 LAMB1P07942 1786 aa4.22□□□□□ -1.73
HMGB1P50-201ENST00000605814 NFASCO94856 1347 aa4.21□□□□□ -1.73
HMGB1P50-201ENST00000605814 IRS2Q9Y4H2 1338 aa4.21□□□□□ -1.73
HMGB1P50-201ENST00000605814 CFAP69A5D8W1 941 aa4.21□□□□□ -1.74
HMGB1P50-201ENST00000605814 TRIM64A6NGJ6 449 aa4.21□□□□□ -1.74
HMGB1P50-201ENST00000605814 MYMKA6NI61 221 aa4.21□□□□□ -1.74
HMGB1P50-201ENST00000605814 TTC34A8MYJ7 566 aa4.21□□□□□ -1.74
HMGB1P50-201ENST00000605814 ERVV-2B6SEH9 535 aa4.21□□□□□ -1.74
HMGB1P50-201ENST00000605814 FAM47E-STBD1D6RA91 191 aa4.21□□□□□ -1.74
HMGB1P50-201ENST00000605814 H0Y8X5 98 aa4.21□□□□□ -1.74
HMGB1P50-201ENST00000605814 TNFRSF10CO14798 259 aa4.21□□□□□ -1.74
HMGB1P50-201ENST00000605814 AREL1O15033 823 aa4.21□□□□□ -1.74
HMGB1P50-201ENST00000605814 PFDN6O15212 129 aa4.21□□□□□ -1.74
HMGB1P50-201ENST00000605814 ADCY3O60266 1144 aa4.21□□□□□ -1.74
HMGB1P50-201ENST00000605814 SULT1C4O75897 302 aa4.21□□□□□ -1.74
HMGB1P50-201ENST00000605814 RSL1D1O76021 490 aaKnown RBP4.21□□□□□ -1.74
HMGB1P50-201ENST00000605814 BMP10O95393 424 aa4.21□□□□□ -1.74
HMGB1P50-201ENST00000605814 OXSR1O95747 527 aaPredicted RBP4.21□□□□□ -1.74
HMGB1P50-201ENST00000605814 PLA2G1BP04054 148 aaKnown RBP4.21□□□□□ -1.74
HMGB1P50-201ENST00000605814 THRAP10827 490 aa4.21□□□□□ -1.74
HMGB1P50-201ENST00000605814 PYGMP11217 842 aa4.21□□□□□ -1.74
HMGB1P50-201ENST00000605814 AOC1P19801 751 aa4.21□□□□□ -1.74
HMGB1P50-201ENST00000605814 FGFR4P22455 802 aa4.21□□□□□ -1.74
HMGB1P50-201ENST00000605814 PON1P27169 355 aa4.21□□□□□ -1.74
HMGB1P50-201ENST00000605814 PCSK6P29122 969 aa4.21□□□□□ -1.74
HMGB1P50-201ENST00000605814 GNA11P29992 359 aa4.21□□□□□ -1.74
HMGB1P50-201ENST00000605814 L1CAMP32004 1257 aa4.21□□□□□ -1.74
HMGB1P50-201ENST00000605814 FDFT1P37268 417 aa4.21□□□□□ -1.74
HMGB1P50-201ENST00000605814 IGHMBP2P38935 993 aaKnown RBP4.21□□□□□ -1.74
HMGB1P50-201ENST00000605814 CETN2P41208 172 aa4.21□□□□□ -1.74
HMGB1P50-201ENST00000605814 MC3RP41968 323 aa4.21□□□□□ -1.74
HMGB1P50-201ENST00000605814 STAT1P42224 750 aa4.21□□□□□ -1.74
HMGB1P50-201ENST00000605814 CRKP46108 304 aa4.21□□□□□ -1.74
HMGB1P50-201ENST00000605814 SLCO1A2P46721 670 aa4.21□□□□□ -1.74
HMGB1P50-201ENST00000605814 HNRNPFP52597 415 aaKnown RBP4.21□□□□□ -1.74
HMGB1P50-201ENST00000605814 ASIC1P78348 528 aa4.21□□□□□ -1.74
HMGB1P50-201ENST00000605814 TXNL4AP83876 142 aaKnown RBP4.21□□□□□ -1.74
HMGB1P50-201ENST00000605814 POU4F1Q01851 419 aa4.21□□□□□ -1.74
HMGB1P50-201ENST00000605814 GRSF1Q12849 480 aaKnown RBP eCLIP4.21□□□□□ -1.74
HMGB1P50-201ENST00000605814 PTP4A2Q12974 167 aa4.21□□□□□ -1.74
HMGB1P50-201ENST00000605814 DNAJC3Q13217 504 aa4.21□□□□□ -1.74
HMGB1P50-201ENST00000605814 E2F2Q14209 437 aa4.21□□□□□ -1.74
HMGB1P50-201ENST00000605814 KRT81Q14533 505 aa4.21□□□□□ -1.74
HMGB1P50-201ENST00000605814 PRKD1Q15139 912 aaPredicted RBP4.21□□□□□ -1.74
HMGB1P50-201ENST00000605814 HLFQ16534 295 aa4.21□□□□□ -1.74
HMGB1P50-201ENST00000605814 LRRC24Q50LG9 513 aa4.21□□□□□ -1.74
HMGB1P50-201ENST00000605814 SMUG1Q53HV7 270 aa4.21□□□□□ -1.74
HMGB1P50-201ENST00000605814 C1orf141Q5JVX7 400 aa4.21□□□□□ -1.74
HMGB1P50-201ENST00000605814 HYIQ5T013 277 aa4.21□□□□□ -1.74
HMGB1P50-201ENST00000605814 SLX4IPQ5VYV7 408 aa4.21□□□□□ -1.74
HMGB1P50-201ENST00000605814 SPTY2D1Q68D10 685 aaPredicted RBP4.21□□□□□ -1.74
HMGB1P50-201ENST00000605814 SPOPLQ6IQ16 392 aa4.21□□□□□ -1.74
HMGB1P50-201ENST00000605814 ZNF280DQ6N043 979 aa4.21□□□□□ -1.74
HMGB1P50-201ENST00000605814 ZNF530Q6P9A1 599 aaPredicted RBP4.21□□□□□ -1.74
HMGB1P50-201ENST00000605814 ZNF449Q6P9G9 518 aa4.21□□□□□ -1.74
HMGB1P50-201ENST00000605814 ZNF790Q6PG37 636 aa4.21□□□□□ -1.74
HMGB1P50-201ENST00000605814 PIK3AP1Q6ZUJ8 805 aa4.21□□□□□ -1.74
HMGB1P50-201ENST00000605814 NEK10Q6ZWH5 1172 aa4.21□□□□□ -1.74
HMGB1P50-201ENST00000605814 ERMP1Q7Z2K6 904 aa4.21□□□□□ -1.74
HMGB1P50-201ENST00000605814 HAUS6Q7Z4H7 955 aa4.21□□□□□ -1.74
HMGB1P50-201ENST00000605814 SAPCD2Q86UD0 394 aa4.21□□□□□ -1.74
HMGB1P50-201ENST00000605814 ITIH5Q86UX2 942 aa4.21□□□□□ -1.74
HMGB1P50-201ENST00000605814 KBTBD6Q86V97 674 aa4.21□□□□□ -1.74
HMGB1P50-201ENST00000605814 COLGALT2Q8IYK4 626 aa4.21□□□□□ -1.74
HMGB1P50-201ENST00000605814 ULK2Q8IYT8 1036 aa4.21□□□□□ -1.74
HMGB1P50-201ENST00000605814 CARFQ8N187 725 aa4.21□□□□□ -1.74
HMGB1P50-201ENST00000605814 METTL25Q8N6Q8 603 aa4.21□□□□□ -1.74
HMGB1P50-201ENST00000605814 ENAHQ8N8S7 591 aaPredicted RBP4.21□□□□□ -1.74
HMGB1P50-201ENST00000605814 FAM133AQ8N9E0 248 aa4.21□□□□□ -1.74
HMGB1P50-201ENST00000605814 PCYOX1LQ8NBM8 494 aa4.21□□□□□ -1.74
HMGB1P50-201ENST00000605814 ICA1LQ8NDH6 482 aa4.21□□□□□ -1.74
HMGB1P50-201ENST00000605814 CHST13Q8NET6 341 aa4.21□□□□□ -1.74
HMGB1P50-201ENST00000605814 ZNF420Q8TAQ5 688 aaPredicted RBP4.21□□□□□ -1.74
HMGB1P50-201ENST00000605814 RAB3IL1Q8TBN0 382 aa4.21□□□□□ -1.74
HMGB1P50-201ENST00000605814 HM13Q8TCT9 377 aa4.21□□□□□ -1.74
HMGB1P50-201ENST00000605814 MGARPQ8TDB4 240 aa4.21□□□□□ -1.74
HMGB1P50-201ENST00000605814 DTX3LQ8TDB6 740 aa4.21□□□□□ -1.74
HMGB1P50-201ENST00000605814 USP33Q8TEY7 942 aa4.21□□□□□ -1.74
HMGB1P50-201ENST00000605814 LRRC15Q8TF66 581 aa4.21□□□□□ -1.74
HMGB1P50-201ENST00000605814 TRUB1Q8WWH5 349 aaKnown RBP4.21□□□□□ -1.74
HMGB1P50-201ENST00000605814 NACC2Q96BF6 587 aa4.21□□□□□ -1.74
HMGB1P50-201ENST00000605814 MTBPQ96DY7 904 aa4.21□□□□□ -1.74
HMGB1P50-201ENST00000605814 HSPBAP1Q96EW2 488 aa4.21□□□□□ -1.74
HMGB1P50-201ENST00000605814 SNF8Q96H20 258 aa4.21□□□□□ -1.74
HMGB1P50-201ENST00000605814 LOXL4Q96JB6 756 aa4.21□□□□□ -1.74
HMGB1P50-201ENST00000605814 NSMCE3Q96MG7 304 aa4.21□□□□□ -1.74
HMGB1P50-201ENST00000605814 CFAP57Q96MR6 1250 aa4.21□□□□□ -1.74
HMGB1P50-201ENST00000605814 ZNF641Q96N77 438 aaPredicted RBP4.21□□□□□ -1.74
HMGB1P50-201ENST00000605814 PPP1R10Q96QC0 940 aaKnown RBP4.21□□□□□ -1.74
HMGB1P50-201ENST00000605814 RANBP9Q96S59 729 aa4.21□□□□□ -1.74
HMGB1P50-201ENST00000605814 NAP1L4Q99733 375 aaKnown RBP4.21□□□□□ -1.74
HMGB1P50-201ENST00000605814 ZSWIM1Q9BR11 485 aa4.21□□□□□ -1.74
HMGB1P50-201ENST00000605814 GPATCH1Q9BRR8 931 aaKnown RBP4.21□□□□□ -1.74
HMGB1P50-201ENST00000605814 ZNF341Q9BYN7 854 aa4.21□□□□□ -1.74
HMGB1P50-201ENST00000605814 IMPG2Q9BZV3 1241 aa4.21□□□□□ -1.74
HMGB1P50-201ENST00000605814 TRIM31Q9BZY9 425 aa4.21□□□□□ -1.74
HMGB1P50-201ENST00000605814 KCTD10Q9H3F6 313 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms