RNA–Protein interactions for RNA: ENST00000602898.1

SPTBN1-206, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,942 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-206ENST00000602898 AVPP01185 164 aa5.17□□□□□ -1.58
SPTBN1-206ENST00000602898 ITGAVP06756 1048 aa5.17□□□□□ -1.58
SPTBN1-206ENST00000602898 ANXA6P08133 673 aa5.17□□□□□ -1.58
SPTBN1-206ENST00000602898 SRGAP2CP0DJJ0 459 aa5.17□□□□□ -1.58
SPTBN1-206ENST00000602898 SRGAP2BP0DMP2 458 aa5.17□□□□□ -1.58
SPTBN1-206ENST00000602898 CTRB1P17538 263 aa5.17□□□□□ -1.58
SPTBN1-206ENST00000602898 TTKP33981 857 aa5.17□□□□□ -1.58
SPTBN1-206ENST00000602898 NNMTP40261 264 aa5.17□□□□□ -1.58
SPTBN1-206ENST00000602898 RGS19P49795 217 aa5.17□□□□□ -1.58
SPTBN1-206ENST00000602898 MRPS15P82914 257 aaKnown RBP5.17□□□□□ -1.58
SPTBN1-206ENST00000602898 OTUD4Q01804 1114 aaKnown RBP5.17□□□□□ -1.58
SPTBN1-206ENST00000602898 KIF23Q02241 960 aaPredicted RBP5.17□□□□□ -1.58
SPTBN1-206ENST00000602898 ALDH6A1Q02252 535 aaKnown RBP5.17□□□□□ -1.58
SPTBN1-206ENST00000602898 SPAG1Q07617 926 aa5.17□□□□□ -1.58
SPTBN1-206ENST00000602898 STK4Q13043 487 aa5.17□□□□□ -1.58
SPTBN1-206ENST00000602898 CUL1Q13616 776 aa5.17□□□□□ -1.58
SPTBN1-206ENST00000602898 PRSS53Q2L4Q9 553 aa5.17□□□□□ -1.58
SPTBN1-206ENST00000602898 CNPY1Q3B7I2 92 aa5.17□□□□□ -1.58
SPTBN1-206ENST00000602898 LRIT3Q3SXY7 679 aa5.17□□□□□ -1.58
SPTBN1-206ENST00000602898 CEP78Q5JTW2 689 aa5.17□□□□□ -1.58
SPTBN1-206ENST00000602898 RNFT1Q5M7Z0 435 aa5.17□□□□□ -1.58
SPTBN1-206ENST00000602898 C6orf183Q5T699 404 aa5.17□□□□□ -1.58
SPTBN1-206ENST00000602898 CTRB2Q6GPI1 263 aa5.17□□□□□ -1.58
SPTBN1-206ENST00000602898 UNC5AQ6ZN44 842 aa5.17□□□□□ -1.58
SPTBN1-206ENST00000602898 P3H2Q8IVL5 708 aa5.17□□□□□ -1.58
SPTBN1-206ENST00000602898 GSTCDQ8NEC7 633 aa5.17□□□□□ -1.58
SPTBN1-206ENST00000602898 ZNF507Q8TCN5 953 aa5.17□□□□□ -1.58
SPTBN1-206ENST00000602898 CAMK1GQ96NX5 476 aa5.17□□□□□ -1.58
SPTBN1-206ENST00000602898 ZIC5Q96T25 663 aa5.17□□□□□ -1.58
SPTBN1-206ENST00000602898 PLIN2Q99541 437 aa5.17□□□□□ -1.58
SPTBN1-206ENST00000602898 AIFM2Q9BRQ8 373 aa5.17□□□□□ -1.58
SPTBN1-206ENST00000602898 TDRD1Q9BXT4 1180 aaKnown RBP5.17□□□□□ -1.58
SPTBN1-206ENST00000602898 NYXQ9GZU5 481 aa5.17□□□□□ -1.58
SPTBN1-206ENST00000602898 DPH5Q9H2P9 285 aa5.17□□□□□ -1.58
SPTBN1-206ENST00000602898 CHRDQ9H2X0 955 aa5.17□□□□□ -1.58
SPTBN1-206ENST00000602898 PIH1D3Q9NQM4 214 aaKnown RBP5.17□□□□□ -1.58
SPTBN1-206ENST00000602898 IARS2Q9NSE4 1012 aaKnown RBP5.17□□□□□ -1.58
SPTBN1-206ENST00000602898 SLC35D1Q9NTN3 355 aa5.17□□□□□ -1.58
SPTBN1-206ENST00000602898 MAD2L2Q9UI95 211 aa5.17□□□□□ -1.58
SPTBN1-206ENST00000602898 CFL2Q9Y281 166 aa5.17□□□□□ -1.58
SPTBN1-206ENST00000602898 USP16Q9Y5T5 823 aa5.17□□□□□ -1.58
SPTBN1-206ENST00000602898 CLCA3PQ9Y6N3 262 aa5.17□□□□□ -1.58
SPTBN1-206ENST00000602898 NRXN1Q9ULB1 1477 aa5.17□□□□□ -1.58
SPTBN1-206ENST00000602898 PKD1L3Q7Z443 1732 aa5.17□□□□□ -1.58
SPTBN1-206ENST00000602898 A0A1W2PQ67 120 aa5.17□□□□□ -1.58
SPTBN1-206ENST00000602898 AGPSO00116 658 aa5.17□□□□□ -1.58
SPTBN1-206ENST00000602898 SH2B2O14492 632 aaPredicted RBP5.17□□□□□ -1.58
SPTBN1-206ENST00000602898 PPIP5K2O43314 1243 aa5.17□□□□□ -1.58
SPTBN1-206ENST00000602898 CBFA2T3O75081 653 aa5.17□□□□□ -1.58
SPTBN1-206ENST00000602898 TMED10P49755 219 aaKnown RBP5.17□□□□□ -1.58
SPTBN1-206ENST00000602898 NT5C2P49902 561 aa5.17□□□□□ -1.58
SPTBN1-206ENST00000602898 AFF1P51825 1210 aaKnown RBP5.17□□□□□ -1.58
SPTBN1-206ENST00000602898 LUMP51884 338 aaPredicted RBP5.17□□□□□ -1.58
SPTBN1-206ENST00000602898 KPNA1P52294 538 aaPredicted RBP5.17□□□□□ -1.58
SPTBN1-206ENST00000602898 NOP14P78316 857 aaKnown RBP5.17□□□□□ -1.58
SPTBN1-206ENST00000602898 ITGB3BPQ13352 177 aaPredicted RBP5.17□□□□□ -1.58
SPTBN1-206ENST00000602898 RTN1Q16799 776 aa5.17□□□□□ -1.58
SPTBN1-206ENST00000602898 PGS1Q32NB8 556 aa5.17□□□□□ -1.58
SPTBN1-206ENST00000602898 ANKRD20A4Q4UJ75 823 aa5.17□□□□□ -1.58
SPTBN1-206ENST00000602898 FLYWCH1Q4VC44 716 aa5.17□□□□□ -1.58
SPTBN1-206ENST00000602898 SLC39A12Q504Y0 691 aa5.17□□□□□ -1.58
SPTBN1-206ENST00000602898 TRIM61Q5EBN2 209 aa5.17□□□□□ -1.58
SPTBN1-206ENST00000602898 XKR9Q5GH70 373 aa5.17□□□□□ -1.58
SPTBN1-206ENST00000602898 PEAR1Q5VY43 1037 aaPredicted RBP5.17□□□□□ -1.58
SPTBN1-206ENST00000602898 KDM7AQ6ZMT4 941 aa5.17□□□□□ -1.58
SPTBN1-206ENST00000602898 DTHD1Q6ZMT9 781 aa5.17□□□□□ -1.58
SPTBN1-206ENST00000602898 RABEPKQ7Z6M1 372 aa5.17□□□□□ -1.58
SPTBN1-206ENST00000602898 PXKQ7Z7A4 578 aa5.17□□□□□ -1.58
SPTBN1-206ENST00000602898 CPLX4Q7Z7G2 160 aa5.17□□□□□ -1.58
SPTBN1-206ENST00000602898 RIOX2Q8IUF8 465 aa5.17□□□□□ -1.58
SPTBN1-206ENST00000602898 HERC6Q8IVU3 1022 aa5.17□□□□□ -1.58
SPTBN1-206ENST00000602898 C16orf71Q8IYS4 520 aaPredicted RBP5.17□□□□□ -1.58
SPTBN1-206ENST00000602898 ANKRD44Q8N8A2 993 aa5.17□□□□□ -1.58
SPTBN1-206ENST00000602898 CCDC63Q8NA47 563 aa5.17□□□□□ -1.58
SPTBN1-206ENST00000602898 PPFIBP2Q8ND30 876 aa5.17□□□□□ -1.58
SPTBN1-206ENST00000602898 STT3BQ8TCJ2 826 aa5.17□□□□□ -1.58
SPTBN1-206ENST00000602898 SNX29Q8TEQ0 813 aa5.17□□□□□ -1.58
SPTBN1-206ENST00000602898 ATP8B4Q8TF62 1192 aa5.17□□□□□ -1.58
SPTBN1-206ENST00000602898 DEPDC1BQ8WUY9 529 aa5.17□□□□□ -1.58
SPTBN1-206ENST00000602898 SLC5A11Q8WWX8 675 aa5.17□□□□□ -1.58
SPTBN1-206ENST00000602898 SGK3Q96BR1 496 aa5.17□□□□□ -1.58
SPTBN1-206ENST00000602898 COA7Q96BR5 231 aa5.17□□□□□ -1.58
SPTBN1-206ENST00000602898 ZNF669Q96BR6 464 aaPredicted RBP5.17□□□□□ -1.58
SPTBN1-206ENST00000602898 MVB12AQ96EY5 273 aa5.17□□□□□ -1.58
SPTBN1-206ENST00000602898 PPP1R36Q96LQ0 422 aa5.17□□□□□ -1.58
SPTBN1-206ENST00000602898 GBP5Q96PP8 586 aa5.17□□□□□ -1.58
SPTBN1-206ENST00000602898 CCT8L2Q96SF2 557 aa5.17□□□□□ -1.58
SPTBN1-206ENST00000602898 AGAP2Q99490 1192 aa5.17□□□□□ -1.58
SPTBN1-206ENST00000602898 SPATA16Q9BXB7 569 aa5.17□□□□□ -1.58
SPTBN1-206ENST00000602898 NUF2Q9BZD4 464 aa5.17□□□□□ -1.58
SPTBN1-206ENST00000602898 CCSER1Q9C0I3 900 aa5.17□□□□□ -1.58
SPTBN1-206ENST00000602898 NT5C3AQ9H0P0 336 aa5.17□□□□□ -1.58
SPTBN1-206ENST00000602898 HAUS4Q9H6D7 363 aa5.17□□□□□ -1.58
SPTBN1-206ENST00000602898 KCNMB3Q9NPA1 279 aa5.17□□□□□ -1.58
SPTBN1-206ENST00000602898 PALD1Q9ULE6 856 aa5.17□□□□□ -1.58
SPTBN1-206ENST00000602898 ZMYND8Q9ULU4 1186 aaPredicted RBP5.17□□□□□ -1.58
SPTBN1-206ENST00000602898 FPGT-TNNI3KV9GXZ4 949 aa5.17□□□□□ -1.58
SPTBN1-206ENST00000602898 USP54Q70EL1 1684 aa5.17□□□□□ -1.58
SPTBN1-206ENST00000602898 IQANK1A0A1B0GTG1 560 aa5.17□□□□□ -1.58
SPTBN1-206ENST00000602898 A0A1W2PQ09 198 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms