RNA–Protein interactions for RNA: ENST00000602574.5

COMMD3-215, Transcript of COMM domain containing 3, humanhuman

TSL 1 (best)

Gene COMMD3, Length 2,290 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-215ENST00000602574 AUP1Q9Y679 476 aa9.08□□□□□ -0.96
COMMD3-215ENST00000602574 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.08□□□□□ -0.96
COMMD3-215ENST00000602574 NRXN3Q9Y4C0 1643 aa9.08□□□□□ -0.96
COMMD3-215ENST00000602574 PIK3C2AO00443 1686 aa9.07□□□□□ -0.96
COMMD3-215ENST00000602574 FLT4P35916 1363 aa9.07□□□□□ -0.96
COMMD3-215ENST00000602574 LOC390937A0A1W2PQ73 354 aa9.07□□□□□ -0.96
COMMD3-215ENST00000602574 F6X3S4 739 aa9.07□□□□□ -0.96
COMMD3-215ENST00000602574 PODXLO00592 558 aa9.07□□□□□ -0.96
COMMD3-215ENST00000602574 CIAO1O76071 339 aa9.07□□□□□ -0.96
COMMD3-215ENST00000602574 RAG1P15918 1043 aa9.07□□□□□ -0.96
COMMD3-215ENST00000602574 UGT2B10P36537 528 aa9.07□□□□□ -0.96
COMMD3-215ENST00000602574 CCR10P46092 362 aa9.07□□□□□ -0.96
COMMD3-215ENST00000602574 NDST1P52848 882 aa9.07□□□□□ -0.96
COMMD3-215ENST00000602574 GPLD1P80108 840 aa9.07□□□□□ -0.96
COMMD3-215ENST00000602574 BNC1Q01954 994 aa9.07□□□□□ -0.96
COMMD3-215ENST00000602574 ELOAQ14241 798 aaKnown RBP9.07□□□□□ -0.96
COMMD3-215ENST00000602574 TOR2AQ5JU69 321 aa9.07□□□□□ -0.96
COMMD3-215ENST00000602574 KRBOX4Q5JUW0 171 aa9.07□□□□□ -0.96
COMMD3-215ENST00000602574 CFAP161Q6P656 301 aa9.07□□□□□ -0.96
COMMD3-215ENST00000602574 SHC4Q6S5L8 630 aa9.07□□□□□ -0.96
COMMD3-215ENST00000602574 ZNF767PQ75MW2 155 aa9.07□□□□□ -0.96
COMMD3-215ENST00000602574 KRT26Q7Z3Y9 468 aa9.07□□□□□ -0.96
COMMD3-215ENST00000602574 MICU2Q8IYU8 434 aa9.07□□□□□ -0.96
COMMD3-215ENST00000602574 ADGRG2Q8IZP9 1017 aa9.07□□□□□ -0.96
COMMD3-215ENST00000602574 OR8H2Q8N162 312 aa9.07□□□□□ -0.96
COMMD3-215ENST00000602574 TBC1D19Q8N5T2 526 aa9.07□□□□□ -0.96
COMMD3-215ENST00000602574 OR52N1Q8NH53 320 aa9.07□□□□□ -0.96
COMMD3-215ENST00000602574 RIPOR3Q96MK2 946 aa9.07□□□□□ -0.96
COMMD3-215ENST00000602574 EFHD1Q9BUP0 239 aa9.07□□□□□ -0.96
COMMD3-215ENST00000602574 TEX13BQ9BXU2 312 aa9.07□□□□□ -0.96
COMMD3-215ENST00000602574 OSBPL8Q9BZF1 889 aa9.07□□□□□ -0.96
COMMD3-215ENST00000602574 TTYH3Q9C0H2 523 aa9.07□□□□□ -0.96
COMMD3-215ENST00000602574 SMYD3Q9H7B4 428 aa9.07□□□□□ -0.96
COMMD3-215ENST00000602574 CRLF2Q9HC73 371 aa9.07□□□□□ -0.96
COMMD3-215ENST00000602574 HOMER2Q9NSB8 354 aa9.07□□□□□ -0.96
COMMD3-215ENST00000602574 KBTBD4Q9NVX7 518 aa9.07□□□□□ -0.96
COMMD3-215ENST00000602574 NKIRAS1Q9NYS0 192 aa9.07□□□□□ -0.96
COMMD3-215ENST00000602574 LRWD1Q9UFC0 647 aa9.07□□□□□ -0.96
COMMD3-215ENST00000602574 ENPP5Q9UJA9 477 aa9.07□□□□□ -0.96
COMMD3-215ENST00000602574 ENTPD4Q9Y227 616 aa9.07□□□□□ -0.96
COMMD3-215ENST00000602574 PCDHA13Q9Y5I0 950 aa9.07□□□□□ -0.96
COMMD3-215ENST00000602574 RAD54BQ9Y620 910 aa9.07□□□□□ -0.96
COMMD3-215ENST00000602574 KCNE2Q9Y6J6 123 aa9.07□□□□□ -0.96
COMMD3-215ENST00000602574 ISPDA4D126 451 aa9.07□□□□□ -0.96
COMMD3-215ENST00000602574 NADKO95544 446 aaPredicted RBP9.07□□□□□ -0.96
COMMD3-215ENST00000602574 ALOX12P18054 663 aa9.07□□□□□ -0.96
COMMD3-215ENST00000602574 FLI1Q01543 452 aaPredicted RBP9.07□□□□□ -0.96
COMMD3-215ENST00000602574 SLC14A2Q15849 920 aa9.07□□□□□ -0.96
COMMD3-215ENST00000602574 UGP2Q16851 508 aa9.07□□□□□ -0.96
COMMD3-215ENST00000602574 AARDQ4LEZ3 155 aa9.07□□□□□ -0.96
COMMD3-215ENST00000602574 HSP90AA4PQ58FG1 418 aa9.07□□□□□ -0.96
COMMD3-215ENST00000602574 DDX59Q5T1V6 619 aaKnown RBP eCLIP9.07□□□□□ -0.96
COMMD3-215ENST00000602574 MEI1Q5TIA1 1274 aa9.07□□□□□ -0.96
COMMD3-215ENST00000602574 HGSNATQ68CP4 663 aa9.07□□□□□ -0.96
COMMD3-215ENST00000602574 PAOXQ6QHF9 649 aa9.07□□□□□ -0.96
COMMD3-215ENST00000602574 RIC3Q7Z5B4 369 aa9.07□□□□□ -0.96
COMMD3-215ENST00000602574 DSG4Q86SJ6 1040 aa9.07□□□□□ -0.96
COMMD3-215ENST00000602574 TDRPQ86YL5 185 aa9.07□□□□□ -0.96
COMMD3-215ENST00000602574 WDR49Q8IV35 697 aa9.07□□□□□ -0.96
COMMD3-215ENST00000602574 STON2Q8WXE9 905 aa9.07□□□□□ -0.96
COMMD3-215ENST00000602574 YIPF5Q969M3 257 aa9.07□□□□□ -0.96
COMMD3-215ENST00000602574 TEKT5Q96M29 485 aa9.07□□□□□ -0.96
COMMD3-215ENST00000602574 FAM161BQ96MY7 647 aa9.07□□□□□ -0.96
COMMD3-215ENST00000602574 SEC22CQ9BRL7 303 aa9.07□□□□□ -0.96
COMMD3-215ENST00000602574 FRMD8Q9BZ67 464 aaPredicted RBP9.07□□□□□ -0.96
COMMD3-215ENST00000602574 C1orf21Q9H246 121 aa9.07□□□□□ -0.96
COMMD3-215ENST00000602574 PPA2Q9H2U2 334 aa9.07□□□□□ -0.96
COMMD3-215ENST00000602574 TFB2MQ9H5Q4 396 aaKnown RBP9.07□□□□□ -0.96
COMMD3-215ENST00000602574 LRRC4CQ9HCJ2 640 aa9.07□□□□□ -0.96
COMMD3-215ENST00000602574 IPO11Q9UI26 975 aaKnown RBP9.07□□□□□ -0.96
COMMD3-215ENST00000602574 ZNF221Q9UK13 617 aa9.07□□□□□ -0.96
COMMD3-215ENST00000602574 CNOT11Q9UKZ1 510 aaKnown RBP9.07□□□□□ -0.96
COMMD3-215ENST00000602574 KCNH3Q9ULD8 1083 aa9.07□□□□□ -0.96
COMMD3-215ENST00000602574 PHTF1Q9UMS5 762 aa9.07□□□□□ -0.96
COMMD3-215ENST00000602574 PLA2G4CQ9UP65 541 aa9.07□□□□□ -0.96
COMMD3-215ENST00000602574 DDX60Q8IY21 1712 aaKnown RBP9.07□□□□□ -0.96
COMMD3-215ENST00000602574 IGSF1Q8N6C5 1336 aa9.07□□□□□ -0.96
COMMD3-215ENST00000602574 PARP4Q9UKK3 1724 aaKnown RBP9.06□□□□□ -0.96
COMMD3-215ENST00000602574 LGALS16A8MUM7 142 aa9.06□□□□□ -0.96
COMMD3-215ENST00000602574 J3QRK9 145 aa9.06□□□□□ -0.96
COMMD3-215ENST00000602574 SORBS3O60504 671 aa9.06□□□□□ -0.96
COMMD3-215ENST00000602574 GAS7O60861 476 aa9.06□□□□□ -0.96
COMMD3-215ENST00000602574 CLPXO76031 633 aa9.06□□□□□ -0.96
COMMD3-215ENST00000602574 CAMTA2O94983 1202 aa9.06□□□□□ -0.96
COMMD3-215ENST00000602574 CRTAMO95727 393 aa9.06□□□□□ -0.96
COMMD3-215ENST00000602574 MYL3P08590 195 aa9.06□□□□□ -0.96
COMMD3-215ENST00000602574 HOXB8P17481 243 aaPredicted RBP9.06□□□□□ -0.96
COMMD3-215ENST00000602574 RAB3AP20336 220 aa9.06□□□□□ -0.96
COMMD3-215ENST00000602574 PEX2P28328 305 aa9.06□□□□□ -0.96
COMMD3-215ENST00000602574 CTHP32929 405 aa9.06□□□□□ -0.96
COMMD3-215ENST00000602574 SCNN1GP51170 649 aa9.06□□□□□ -0.96
COMMD3-215ENST00000602574 HIRAP54198 1017 aaPredicted RBP9.06□□□□□ -0.96
COMMD3-215ENST00000602574 PTPN5P54829 565 aa9.06□□□□□ -0.96
COMMD3-215ENST00000602574 MORF4L2Q15014 288 aa9.06□□□□□ -0.96
COMMD3-215ENST00000602574 WSCD2Q2TBF2 565 aa9.06□□□□□ -0.96
COMMD3-215ENST00000602574 INAVAQ3KP66 663 aa9.06□□□□□ -0.96
COMMD3-215ENST00000602574 RETSATQ6NUM9 610 aa9.06□□□□□ -0.96
COMMD3-215ENST00000602574 XKRXQ6PP77 449 aa9.06□□□□□ -0.96
COMMD3-215ENST00000602574 UTS2BQ765I0 119 aa9.06□□□□□ -0.96
COMMD3-215ENST00000602574 ARMC8Q8IUR7 673 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms