RNA–Protein interactions for RNA: ENST00000601981.5

UPF1-213, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 5

Gene UPF1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-213ENST00000601981 AGO1Q9UL18 857 aaKnown RBP10.42□□□□□ -0.74
UPF1-213ENST00000601981 MRPS17Q9Y2R5 130 aaKnown RBP10.42□□□□□ -0.74
UPF1-213ENST00000601981 DOCK4Q8N1I0 1966 aa10.41□□□□□ -0.74
UPF1-213ENST00000601981 F5P12259 2224 aa10.41□□□□□ -0.74
UPF1-213ENST00000601981 KCNU1A8MYU2 1149 aa10.41□□□□□ -0.74
UPF1-213ENST00000601981 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.41□□□□□ -0.74
UPF1-213ENST00000601981 RAD51CO43502 376 aa10.41□□□□□ -0.74
UPF1-213ENST00000601981 ATP8B1O43520 1251 aa10.41□□□□□ -0.74
UPF1-213ENST00000601981 ACSL4O60488 711 aa10.41□□□□□ -0.74
UPF1-213ENST00000601981 PHF2O75151 1096 aa10.41□□□□□ -0.74
UPF1-213ENST00000601981 ZRANB2O95218 330 aaKnown RBP eCLIP10.41□□□□□ -0.74
UPF1-213ENST00000601981 ADH5P11766 374 aa10.41□□□□□ -0.74
UPF1-213ENST00000601981 CHRNA3P32297 505 aa10.41□□□□□ -0.74
UPF1-213ENST00000601981 PTPN7P35236 360 aa10.41□□□□□ -0.74
UPF1-213ENST00000601981 CETN2P41208 172 aa10.41□□□□□ -0.74
UPF1-213ENST00000601981 CXCR3P49682 368 aa10.41□□□□□ -0.74
UPF1-213ENST00000601981 AIF1P55008 147 aa10.41□□□□□ -0.74
UPF1-213ENST00000601981 DHCR24Q15392 516 aa10.41□□□□□ -0.74
UPF1-213ENST00000601981 MLF2Q15773 248 aaPredicted RBP10.41□□□□□ -0.74
UPF1-213ENST00000601981 CYP1B1Q16678 543 aa10.41□□□□□ -0.74
UPF1-213ENST00000601981 ANO4Q32M45 955 aa10.41□□□□□ -0.74
UPF1-213ENST00000601981 CCDC14Q49A88 953 aa10.41□□□□□ -0.74
UPF1-213ENST00000601981 ZC3H12AQ5D1E8 599 aaKnown RBP10.41□□□□□ -0.74
UPF1-213ENST00000601981 TRIM68Q6AZZ1 485 aa10.41□□□□□ -0.74
UPF1-213ENST00000601981 NUDT18Q6ZVK8 323 aa10.41□□□□□ -0.74
UPF1-213ENST00000601981 MAATS1Q7Z4T9 603 aa10.41□□□□□ -0.74
UPF1-213ENST00000601981 RALGPS2Q86X27 583 aaPredicted RBP10.41□□□□□ -0.74
UPF1-213ENST00000601981 KLHL7Q8IXQ5 586 aa10.41□□□□□ -0.74
UPF1-213ENST00000601981 ZNF557Q8N988 423 aaPredicted RBP10.41□□□□□ -0.74
UPF1-213ENST00000601981 C12orf50Q8NA57 414 aaPredicted RBP10.41□□□□□ -0.74
UPF1-213ENST00000601981 CCDC26Q8TAB7 109 aa10.41□□□□□ -0.74
UPF1-213ENST00000601981 RIN3Q8TB24 985 aa10.41□□□□□ -0.74
UPF1-213ENST00000601981 FAM172AQ8WUF8 416 aa10.41□□□□□ -0.74
UPF1-213ENST00000601981 ASIC4Q96FT7 647 aa10.41□□□□□ -0.74
UPF1-213ENST00000601981 SLC39A13Q96H72 371 aa10.41□□□□□ -0.74
UPF1-213ENST00000601981 RBM41Q96IZ5 413 aaKnown RBP10.41□□□□□ -0.74
UPF1-213ENST00000601981 XPO6Q96QU8 1125 aaKnown RBP10.41□□□□□ -0.74
UPF1-213ENST00000601981 MFSD1Q9H3U5 465 aa10.41□□□□□ -0.74
UPF1-213ENST00000601981 GDF3Q9NR23 364 aa10.41□□□□□ -0.74
UPF1-213ENST00000601981 ARHGEF3Q9NR81 526 aa10.41□□□□□ -0.74
UPF1-213ENST00000601981 SPHK2Q9NRA0 654 aa10.41□□□□□ -0.74
UPF1-213ENST00000601981 PIGVQ9NUD9 493 aa10.41□□□□□ -0.74
UPF1-213ENST00000601981 GTSE1Q9NYZ3 720 aa10.41□□□□□ -0.74
UPF1-213ENST00000601981 DMGDHQ9UI17 866 aaKnown RBP10.41□□□□□ -0.74
UPF1-213ENST00000601981 STOML2Q9UJZ1 356 aa10.41□□□□□ -0.74
UPF1-213ENST00000601981 PIAS3Q9Y6X2 628 aa10.41□□□□□ -0.74
UPF1-213ENST00000601981 KIAA1549LQ6ZVL6 1849 aa10.41□□□□□ -0.74
UPF1-213ENST00000601981 BHMG1C9JSJ3 638 aaPredicted RBP10.4□□□□□ -0.74
UPF1-213ENST00000601981 F5H5T6 163 aa10.4□□□□□ -0.74
UPF1-213ENST00000601981 ARNTLO00327 626 aa10.4□□□□□ -0.74
UPF1-213ENST00000601981 SCAMP3O14828 347 aaKnown RBP10.4□□□□□ -0.74
UPF1-213ENST00000601981 GREM1O60565 184 aa10.4□□□□□ -0.74
UPF1-213ENST00000601981 ENDOD1O94919 500 aa10.4□□□□□ -0.74
UPF1-213ENST00000601981 HEXIM1O94992 359 aaKnown RBP10.4□□□□□ -0.74
UPF1-213ENST00000601981 KLKB1P03952 638 aa10.4□□□□□ -0.74
UPF1-213ENST00000601981 CYP17A1P05093 508 aa10.4□□□□□ -0.74
UPF1-213ENST00000601981 KRT7P08729 469 aa10.4□□□□□ -0.74
UPF1-213ENST00000601981 ARSAP15289 507 aa10.4□□□□□ -0.74
UPF1-213ENST00000601981 PCK1P35558 622 aa10.4□□□□□ -0.74
UPF1-213ENST00000601981 PLA2G5P39877 138 aa10.4□□□□□ -0.74
UPF1-213ENST00000601981 SSR1P43307 286 aaKnown RBP10.4□□□□□ -0.74
UPF1-213ENST00000601981 FNTAP49354 379 aa10.4□□□□□ -0.74
UPF1-213ENST00000601981 COPS2P61201 443 aa10.4□□□□□ -0.74
UPF1-213ENST00000601981 PITX1P78337 314 aaPredicted RBP10.4□□□□□ -0.74
UPF1-213ENST00000601981 SLC25A11Q02978 314 aaKnown RBP10.4□□□□□ -0.74
UPF1-213ENST00000601981 TNK2Q07912 1038 aa10.4□□□□□ -0.74
UPF1-213ENST00000601981 EIF4EBP2Q13542 120 aaPredicted RBP10.4□□□□□ -0.74
UPF1-213ENST00000601981 DHX34Q14147 1143 aaKnown RBP10.4□□□□□ -0.74
UPF1-213ENST00000601981 SIX1Q15475 284 aaPredicted RBP10.4□□□□□ -0.74
UPF1-213ENST00000601981 HADHQ16836 314 aaKnown RBP10.4□□□□□ -0.74
UPF1-213ENST00000601981 C15orf59Q2T9L4 293 aaPredicted RBP10.4□□□□□ -0.74
UPF1-213ENST00000601981 MPPE1Q53F39 396 aa10.4□□□□□ -0.74
UPF1-213ENST00000601981 SLC44A4Q53GD3 710 aa10.4□□□□□ -0.74
UPF1-213ENST00000601981 RABGAP1LQ5R372 815 aa10.4□□□□□ -0.74
UPF1-213ENST00000601981 LY6G5CQ5SRR4 150 aa10.4□□□□□ -0.74
UPF1-213ENST00000601981 BEND6Q5SZJ8 279 aaPredicted RBP10.4□□□□□ -0.74
UPF1-213ENST00000601981 TTC39BQ5VTQ0 682 aaPredicted RBP10.4□□□□□ -0.74
UPF1-213ENST00000601981 AADACL2Q6P093 401 aa10.4□□□□□ -0.74
UPF1-213ENST00000601981 SCYL2Q6P3W7 929 aa10.4□□□□□ -0.74
UPF1-213ENST00000601981 LRRC31Q6UY01 552 aa10.4□□□□□ -0.74
UPF1-213ENST00000601981 ZNF852Q6ZMS4 543 aa10.4□□□□□ -0.74
UPF1-213ENST00000601981 TPRG1Q6ZUI0 275 aa10.4□□□□□ -0.74
UPF1-213ENST00000601981 CHSY1Q86X52 802 aa10.4□□□□□ -0.74
UPF1-213ENST00000601981 SUGP1Q8IWZ8 645 aaKnown RBP10.4□□□□□ -0.74
UPF1-213ENST00000601981 FAM217AQ8IXS0 508 aa10.4□□□□□ -0.74
UPF1-213ENST00000601981 IFT20Q8IY31 132 aa10.4□□□□□ -0.74
UPF1-213ENST00000601981 RCOR2Q8IZ40 523 aa10.4□□□□□ -0.74
UPF1-213ENST00000601981 ADGRG2Q8IZP9 1017 aa10.4□□□□□ -0.74
UPF1-213ENST00000601981 PRELID2Q8N945 189 aa10.4□□□□□ -0.74
UPF1-213ENST00000601981 EIF1ADQ8N9N8 165 aaKnown RBP10.4□□□□□ -0.74
UPF1-213ENST00000601981 HJURPQ8NCD3 748 aaPredicted RBP10.4□□□□□ -0.74
UPF1-213ENST00000601981 DDI1Q8WTU0 396 aa10.4□□□□□ -0.74
UPF1-213ENST00000601981 CENPIQ92674 756 aaPredicted RBP10.4□□□□□ -0.74
UPF1-213ENST00000601981 FAM122AQ96E09 287 aa10.4□□□□□ -0.74
UPF1-213ENST00000601981 BBS2Q9BXC9 721 aa10.4□□□□□ -0.74
UPF1-213ENST00000601981 TKTL2Q9H0I9 626 aa10.4□□□□□ -0.74
UPF1-213ENST00000601981 DDX47Q9H0S4 455 aaKnown RBP10.4□□□□□ -0.74
UPF1-213ENST00000601981 LINC00597Q9H2U6 94 aa10.4□□□□□ -0.74
UPF1-213ENST00000601981 HPS4Q9NQG7 708 aa10.4□□□□□ -0.74
UPF1-213ENST00000601981 HEBP1Q9NRV9 189 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms