RNA–Protein interactions for RNA: ENST00000600718.5

SHKBP1-224, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-224ENST00000600718 PDE12Q6L8Q7 609 aaKnown RBP18.17■□□□□ 0.5
SHKBP1-224ENST00000600718 ZNF683Q8IZ20 524 aa18.17■□□□□ 0.5
SHKBP1-224ENST00000600718 IQCKQ8N0W5 287 aa18.17■□□□□ 0.5
SHKBP1-224ENST00000600718 ELMOD1Q8N336 334 aa18.17■□□□□ 0.5
SHKBP1-224ENST00000600718 CCDC33Q8N5R6 958 aa18.17■□□□□ 0.5
SHKBP1-224ENST00000600718 CCNYQ8ND76 341 aa18.17■□□□□ 0.5
SHKBP1-224ENST00000600718 TGS1Q96RS0 853 aaKnown RBP18.17■□□□□ 0.5
SHKBP1-224ENST00000600718 LGMNQ99538 433 aa18.17■□□□□ 0.5
SHKBP1-224ENST00000600718 ZNF334Q9HCZ1 680 aaPredicted RBP18.17■□□□□ 0.5
SHKBP1-224ENST00000600718 DONSONQ9NYP3 566 aa18.17■□□□□ 0.5
SHKBP1-224ENST00000600718 SHOC2Q9UQ13 582 aa18.17■□□□□ 0.5
SHKBP1-224ENST00000600718 STK10O94804 968 aaKnown RBP18.16■□□□□ 0.5
SHKBP1-224ENST00000600718 ARHGEF15O94989 841 aa18.16■□□□□ 0.5
SHKBP1-224ENST00000600718 HARS2P49590 506 aaKnown RBP18.16■□□□□ 0.5
SHKBP1-224ENST00000600718 AP1B1Q10567 949 aa18.16■□□□□ 0.5
SHKBP1-224ENST00000600718 TMEM150AQ86TG1 271 aa18.16■□□□□ 0.5
SHKBP1-224ENST00000600718 HOOK3Q86VS8 718 aa18.16■□□□□ 0.5
SHKBP1-224ENST00000600718 ZCCHC9Q8N567 271 aaKnown RBP18.16■□□□□ 0.5
SHKBP1-224ENST00000600718 NPWQ8N729 165 aa18.16■□□□□ 0.5
SHKBP1-224ENST00000600718 LRRN4Q8WUT4 740 aa18.16■□□□□ 0.5
SHKBP1-224ENST00000600718 PLD4Q96BZ4 506 aa18.16■□□□□ 0.5
SHKBP1-224ENST00000600718 IL21Q9HBE4 155 aa18.16■□□□□ 0.5
SHKBP1-224ENST00000600718 FARP1Q9Y4F1 1045 aaPredicted RBP18.16■□□□□ 0.5
SHKBP1-224ENST00000600718 IGLV3-10A0A075B6K4 115 aa18.15■□□□□ 0.5
SHKBP1-224ENST00000600718 GOLGA6BA6NDN3 693 aa18.15■□□□□ 0.5
SHKBP1-224ENST00000600718 GRM6O15303 877 aa18.15■□□□□ 0.5
SHKBP1-224ENST00000600718 CA3P07451 260 aa18.15■□□□□ 0.5
SHKBP1-224ENST00000600718 KCNQ1P51787 676 aa18.15■□□□□ 0.5
SHKBP1-224ENST00000600718 CLCN4P51793 760 aa18.15■□□□□ 0.5
SHKBP1-224ENST00000600718 NRLP54845 237 aa18.15■□□□□ 0.5
SHKBP1-224ENST00000600718 SLC20A2Q08357 652 aa18.15■□□□□ 0.5
SHKBP1-224ENST00000600718 PPIDQ08752 370 aaKnown RBP18.15■□□□□ 0.5
SHKBP1-224ENST00000600718 FAM109BQ6ICB4 259 aaPredicted RBP18.15■□□□□ 0.5
SHKBP1-224ENST00000600718 UBLCP1Q8WVY7 318 aaPredicted RBP18.15■□□□□ 0.5
SHKBP1-224ENST00000600718 CPT1BQ92523 772 aa18.15■□□□□ 0.5
SHKBP1-224ENST00000600718 AZIN2Q96A70 460 aa18.15■□□□□ 0.5
SHKBP1-224ENST00000600718 P2RY11Q96G91 374 aa18.15■□□□□ 0.5
SHKBP1-224ENST00000600718 PRMT1Q99873 361 aaKnown RBP18.15■□□□□ 0.5
SHKBP1-224ENST00000600718 ZYG11BQ9C0D3 744 aa18.15■□□□□ 0.5
SHKBP1-224ENST00000600718 KLC2Q9H0B6 622 aa18.15■□□□□ 0.5
SHKBP1-224ENST00000600718 VANGL2Q9ULK5 521 aa18.15■□□□□ 0.5
SHKBP1-224ENST00000600718 CLUHO75153 1309 aa18.15■□□□□ 0.5
SHKBP1-224ENST00000600718 MTSS1O43312 755 aa18.15■□□□□ 0.5
SHKBP1-224ENST00000600718 VAV1P15498 845 aa18.15■□□□□ 0.5
SHKBP1-224ENST00000600718 RHOQP17081 205 aa18.15■□□□□ 0.5
SHKBP1-224ENST00000600718 CHKAP35790 457 aa18.15■□□□□ 0.5
SHKBP1-224ENST00000600718 ERVK-21P61565 698 aa18.15■□□□□ 0.5
SHKBP1-224ENST00000600718 ZNF33AQ06730 810 aa18.15■□□□□ 0.5
SHKBP1-224ENST00000600718 UAP1Q16222 522 aaPredicted RBP18.15■□□□□ 0.5
SHKBP1-224ENST00000600718 CCDC25Q86WR0 208 aa18.15■□□□□ 0.5
SHKBP1-224ENST00000600718 TP53INP2Q8IXH6 220 aa18.15■□□□□ 0.5
SHKBP1-224ENST00000600718 RTL3Q8N8U3 475 aaKnown RBP18.15■□□□□ 0.5
SHKBP1-224ENST00000600718 NAT8LQ8N9F0 302 aa18.15■□□□□ 0.5
SHKBP1-224ENST00000600718 PRCCQ92733 491 aaPredicted RBP18.15■□□□□ 0.5
SHKBP1-224ENST00000600718 HDAC11Q96DB2 347 aa18.15■□□□□ 0.5
SHKBP1-224ENST00000600718 KLF16Q9BXK1 252 aaPredicted RBP18.15■□□□□ 0.5
SHKBP1-224ENST00000600718 RNF38Q9H0F5 515 aa18.15■□□□□ 0.5
SHKBP1-224ENST00000600718 A0A0A0MRY4 1105 aa18.14■□□□□ 0.49
SHKBP1-224ENST00000600718 C2orf78A6NCI8 922 aa18.14■□□□□ 0.49
SHKBP1-224ENST00000600718 CCDC85CA6NKD9 419 aa18.14■□□□□ 0.49
SHKBP1-224ENST00000600718 DRGXA6NNA5 263 aa18.14■□□□□ 0.49
SHKBP1-224ENST00000600718 ACSL4O60488 711 aa18.14■□□□□ 0.49
SHKBP1-224ENST00000600718 GARSP41250 739 aaKnown RBP18.14■□□□□ 0.49
SHKBP1-224ENST00000600718 SLC11A2P49281 568 aa18.14■□□□□ 0.49
SHKBP1-224ENST00000600718 CAMK1Q14012 370 aa18.14■□□□□ 0.49
SHKBP1-224ENST00000600718 PPM1LQ5SGD2 360 aa18.14■□□□□ 0.49
SHKBP1-224ENST00000600718 RAP1GAP2Q684P5 730 aa18.14■□□□□ 0.49
SHKBP1-224ENST00000600718 TRMT10CQ7L0Y3 403 aaKnown RBP18.14■□□□□ 0.49
SHKBP1-224ENST00000600718 SPRED2Q7Z698 418 aa18.14■□□□□ 0.49
SHKBP1-224ENST00000600718 NETO2Q8NC67 525 aa18.14■□□□□ 0.49
SHKBP1-224ENST00000600718 CCDC110Q8TBZ0 833 aa18.14■□□□□ 0.49
SHKBP1-224ENST00000600718 SPATA13Q96N96 652 aa18.14■□□□□ 0.49
SHKBP1-224ENST00000600718 LRRC3Q9BY71 257 aa18.14■□□□□ 0.49
SHKBP1-224ENST00000600718 PABPC3Q9H361 631 aaKnown RBP18.14■□□□□ 0.49
SHKBP1-224ENST00000600718 RAB6BQ9NRW1 208 aa18.14■□□□□ 0.49
SHKBP1-224ENST00000600718 CSPG5O95196 566 aa18.13■□□□□ 0.49
SHKBP1-224ENST00000600718 BASP1P80723 227 aaKnown RBP18.13■□□□□ 0.49
SHKBP1-224ENST00000600718 FBXL22Q6P050 247 aa18.13■□□□□ 0.49
SHKBP1-224ENST00000600718 NLRP14Q86W24 1093 aa18.13■□□□□ 0.49
SHKBP1-224ENST00000600718 RELL1Q8IUW5 271 aa18.13■□□□□ 0.49
SHKBP1-224ENST00000600718 LRRC49Q8IUZ0 686 aa18.13■□□□□ 0.49
SHKBP1-224ENST00000600718 MPP6Q9NZW5 540 aa18.13■□□□□ 0.49
SHKBP1-224ENST00000600718 H3BNC9 293 aa18.13■□□□□ 0.49
SHKBP1-224ENST00000600718 CHADO15335 359 aa18.13■□□□□ 0.49
SHKBP1-224ENST00000600718 OPHN1O60890 802 aa18.13■□□□□ 0.49
SHKBP1-224ENST00000600718 STC2O76061 302 aa18.13■□□□□ 0.49
SHKBP1-224ENST00000600718 TACR2P21452 398 aa18.13■□□□□ 0.49
SHKBP1-224ENST00000600718 GABRR2P28476 465 aa18.13■□□□□ 0.49
SHKBP1-224ENST00000600718 IRS1P35568 1242 aa18.13■□□□□ 0.49
SHKBP1-224ENST00000600718 GPM6BQ13491 265 aa18.13■□□□□ 0.49
SHKBP1-224ENST00000600718 ANKRD20A2Q5SQ80 823 aa18.13■□□□□ 0.49
SHKBP1-224ENST00000600718 ANKRD20A1Q5TYW2 823 aa18.13■□□□□ 0.49
SHKBP1-224ENST00000600718 ANKRD20A3Q5VUR7 823 aa18.13■□□□□ 0.49
SHKBP1-224ENST00000600718 AFMIDQ63HM1 303 aa18.13■□□□□ 0.49
SHKBP1-224ENST00000600718 NADSYN1Q6IA69 706 aa18.13■□□□□ 0.49
SHKBP1-224ENST00000600718 LRIG3Q6UXM1 1119 aa18.13■□□□□ 0.49
SHKBP1-224ENST00000600718 ARHGEF18Q6ZSZ5 1173 aa18.13■□□□□ 0.49
SHKBP1-224ENST00000600718 CHSY1Q86X52 802 aa18.13■□□□□ 0.49
SHKBP1-224ENST00000600718 TMC8Q8IU68 726 aa18.13■□□□□ 0.49
SHKBP1-224ENST00000600718 MRPS31Q92665 395 aaKnown RBP18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms